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  Chromosome 5 - BAC End Pairs - Single Contig
 
Description of this page Main Reports Page Main Assembly Page Main BAC End Pairs Page Whole Chromosome Single Contigs

Line color code:

  • White: lists number of confirming clone bridges for this accession
  • Blue: clone bridges two adjacent contigs
  • Green: clone bridges close contigs
  • Pink: multiple clones bridge distant regions on same chromosome
  • Red: multiple clones bridge regions on different chromosomes
NT_033086 NT_023089 NT_006576 NT_033103 NT_029977 NT_016779 NT_033104 NT_023110
NT_033119 NT_023097 NT_023084 NT_023115 NT_023315 NT_033112 NT_006547 NT_023162
NT_006577 NT_023114 NT_023216 NT_023124 NT_026281 NT_023085 NT_033113 NT_033110
NT_006679 NT_023195 NT_033085 NT_006702 NT_023098 NT_028188 NT_031794 NT_023102
NT_023081 NT_006693 NT_016864 NT_033115 NT_033092 NT_006665 NT_006497 NT_006431
NT_033093 NT_006790 NT_006713 NT_026283 NT_023083 NT_033077 NT_033111 NT_033079
NT_007022 NT_006540 NT_030680 NT_029973 NT_028179 NT_033118 NT_006731 NT_023148
NT_023290 NT_033094 NT_033116 NT_006654 NT_033095 NT_033098 NT_033082 NT_033096
NT_023091 NT_006789 NT_033108 NT_006899 NT_006780 NT_030685 NT_025721 NT_033106
NT_025702 NT_023192 NT_029295 NT_033097 NT_016755 NT_029975 NT_033083 NT_033084
NT_023238 NT_033105 NT_007072 NT_033091 NT_016714 NT_006859 NT_006489 NT_029289
NT_033078 NT_023269 NT_023248 NT_030691 NT_006788 NT_030698 NT_033117 NT_033080
NT_023133 NT_006907 NT_023132 NT_033089 NT_006725 NT_023093 NT_006802 NT_006932
NT_006519


  NT_006679
 
LinksContig1Acc1Start1 PhsBAC End Acc1Or1Chr2Contig2Acc2Start2 PhsBAC End Acc2Or2Clone
S/G/Y/R/B/O NT_006679AC025443359861393         6 confirm
S/G/Y/R/B/O NT_006679AC025443360010303AQ553236-1chr5NT_033119AC026730195316873AQ553239-1RP11-419M2
S/G/Y/R/B/O NT_006679AC109475360074192         4 confirm
S/G/Y/R/B/O NT_006679AC109475361862732AQ2657141chr5NT_023110AC010490192055283AQ2757991CTD-2514B22
S/G/Y/R/B/O NT_006679AC109475361543312AQ5475211chr5NT_023110AC010490192688603AQ5475201RP11-422J24
S/G/Y/R/B/O NT_006679AC109475361543192AQ5475011chr5NT_023110AC010490192688613AQ5475001RP11-422H22
S/G/Y/R/B/O NT_006679AC109475361943842AQ6961911chr5NT_023110AC010490192782753AQ8771741CTD-2142J7
S/G/Y/R/B/O NT_006679AC109475361943712B743401chr5NT_023110AC010490192782823B743411CTD-2042J7
S/G/Y/R/B/O NT_006679AC109475361292082AQ187034-1chr5NT_033119AC091910193987591AQ148243-1CTD-3126C9
S/G/Y/R/B/O NT_006679AC109475361437592AQ482411-1chr5NT_033119AC091910194037171AQ482412-1RP11-212H17
S/G/Y/R/B/O NT_006679AC109475361417412AQ392536-1chr5NT_033119AC026295194323311AQ392533-1CTD-2548J9
S/G/Y/R/B/O NT_006679AC109475361419472AQ392434-1chr5NT_033119AC026295194324231AQ392431-1CTD-2548J10
S/G/Y/R/B/O NT_006679AC109475360847522AQ561389-1chr5NT_033119AC026295194349011AQ564604-1RP11-933E24
S/G/Y/R/B/O NT_006679AC109475360658942AQ208832-1chr5NT_033119AC026295194349991AQ136331-1CTD-3056P2
S/G/Y/R/B/O NT_006679AC109475360629372AQ668610-1chr5NT_033119AC091910194871351AQ608895-1RP11-1001A11
S/G/Y/R/B/O NT_006679AC109475361709972AQ402543-1chr5NT_023085AC008971351759113AQ4014651RP11-630G23
S/G/Y/R/B/O NT_006679AC109475361836822AQ387571-1chr5NT_023085AC008971352197003AQ3875691RP11-140H7
S/G/Y/R/B/O NT_006679AC109475361628292AQ785201-1chr5NT_023085AC008971352339833AQ8064991CTD-3159M9
S/G/Y/R/B/O NT_006679AC109475361879382AQ521713-1chr5NT_023085AC008971352354603AQ8314531RP11-815E24
S/G/Y/R/B/O NT_006679AC109475360106202AQ4265591chr5NT_023085AC026707353589302AQ426651-1CTD-2572M2
S/G/Y/R/B/O NT_006679AC109475360229622AQ2610691chr5NT_023085AL157879354298873AQ261071-1CTD-2506A7
S/G/Y/R/B/O NT_006679AC109475361312862AQ5611231chr5NT_023085AL157879354513033AQ901459-1CTD-2087I4
S/G/Y/R/B/O NT_006679AC109475360658842B82378-1chr5NT_023085AL157879354641413B823791RP11-15A6
S/G/Y/R/B/O NT_006679AC109475360153472AQ198172-1chr5NT_023085AL157879354686713AQ1981751RP11-60B5
S/G/Y/R/B/O NT_006679AC109475361789972AQ0201111chr5NT_023085AL157879354737853AQ020112-1CTD-2313D6
S/G/Y/R/B/O NT_006679AC109475360145362AQ775988-1chr5NT_023085AL157879354921903AQ7759041CTD-2151P4
S/G/Y/R/B/O NT_006679AC109475360600942AQ017870-1chr5NT_023085AL157879355288543AQ0178711CTD-2302O3
S/G/Y/R/B/O NT_006679AC109475360128112AQ5814071chr5NT_033113AC114934357071461AQ283104-1RP11-79I8
S/G/Y/R/B/O NT_006679AC109475360145362AQ775988-1chr5NT_006497AC108108644890131AQ7759041CTD-2151P4
S/G/Y/R/B/O NT_006679AC109475360153472AQ198172-1chr5NT_006654AC0221041086441183AQ198175-1RP11-60B5
S/G/Y/R/B/O NT_006679AC109475360600942AQ017870-1chr5NT_006497AC011244644016741AQ0178711CTD-2302O3
S/G/Y/R/B/O NT_006679AC109475360600942AQ017870-1chr5NT_006497AC108108645338771AQ0178711CTD-2302O3
S/G/Y/R/B/O NT_006679AC109475360656242AQ6790091chr6NT_033172AL021368716471063AQ668165-1CTD-2125F9
S/G/Y/R/B/O NT_006679AC109475361312862AQ5611231chr6NT_033172AL021368716578313AQ901459-1CTD-2087I4
S/G/Y/R/B/O NT_006679AC109475361789972AQ0201111chr5NT_006654AC0922781084030282AQ0201121CTD-2313D6
S/G/Y/R/B/O NT_006679AC109475360229622AQ2610691chr6NT_007592AL591044332974543AQ261071-1CTD-2506A7
S/G/Y/R/B/O NT_006679AC109475360656242AQ6790091chr6NT_007592AL591044333021453AQ668165-1CTD-2125F9
S/G/Y/R/B/O NT_006679AC109475361312862AQ5611231chr6NT_007592AL133255333137273AQ901459-1CTD-2087I4
S/G/Y/R/B/O NT_006679AC109475361140462AQ0754621chr6NT_007592AL133255333149663AQ075458-1CTD-2351B21
S/G/Y/R/B/O NT_006679AC109475360153472AQ198172-1chr6NT_007592AL133255333342483AQ1981751RP11-60B5
S/G/Y/R/B/O NT_006679AC093506360849411         1 confirm
S/G/Y/R/B/O NT_006679AC093506360959981AQ454913-1chr5NT_033119AC026295194633071AQ499938-1RP11-787I4
S/G/Y/R/B/O NT_006679AC013581362002871         0 confirm
S/G/Y/R/B/O NT_006679AC093279362014973         17 confirm
S/G/Y/R/B/O NT_006679AC093279363086273AQ547459-1chr5NT_033119AC091910193700831AQ5474571RP11-427I10
S/G/Y/R/B/O NT_006679AC093279362975153AQ682522-1chr5NT_033119AC091910193719351AQ6972441RP11-1095L2
S/G/Y/R/B/O NT_006679AC093279362428983AQ232710-1chr5NT_033119AC091910193739641AQ2324551CTD-2034C3
S/G/Y/R/B/O NT_006679AC093279362627043AQ401469-1chr5NT_033119AC091910193764691AQ4025471RP11-630I7
S/G/Y/R/B/O NT_006679AC093279362974553AQ537647-1chr5NT_033119AC091910193764751AQ5376461RP11-356J3
S/G/Y/R/B/O NT_006679AC093279362343003AQ5611231chr5NT_023085AL157879354513033AQ901459-1CTD-2087I4


  NT_006679 (cont)
 
LinksContig1Acc1Start1 PhsBAC End Acc1Or1Chr2Contig2Acc2Start2 PhsBAC End Acc2Or2Clone
S/G/Y/R/B/O NT_006679AC093279362047473AQ541323-1chr5NT_023085AL157879354641123AQ5375911RP11-343C19
S/G/Y/R/B/O NT_006679AC093279362976043AQ531900-1chr5NT_023085AL157879355499313AQ5319021RP11-374A9
S/G/Y/R/B/O NT_006679AC093279362752133B65392-1chr5NT_033113AC114934356050971AQ2295361CTD-2021M10
S/G/Y/R/B/O NT_006679AC093279363340313AQ124398-1chr5NT_033113AC114934356314021AQ1242541CTD-3126A4
S/G/Y/R/B/O NT_006679AC093279363545083B47964-1chr5NT_033113AC114934356614251B479651RP11-3M7
S/G/Y/R/B/O NT_006679AC093279362934203AQ695258-1chr5NT_033113AC114934356646161AQ6750641CTD-2139K19
S/G/Y/R/B/O NT_006679AC093279363192003AQ473685-1chr5NT_033113AC114934356923571AQ473683-1CTD-2595G13
S/G/Y/R/B/O NT_006679AC093279362974553AQ537647-1chr5NT_033113AC114934357142731AQ537646-1RP11-356J3
S/G/Y/R/B/O NT_006679AC093279362627043AQ401469-1chr5NT_033113AC114934357142861AQ402547-1RP11-630I7
S/G/Y/R/B/O NT_006679AC093279362428983AQ232710-1chr5NT_033113AC114934357167841AQ232455-1CTD-2034C3
S/G/Y/R/B/O NT_006679AC093279362047473AQ541323-1chr5NT_006497AC010237643298063AQ5375911RP11-343C19
S/G/Y/R/B/O NT_006679AC093279362047473AQ541323-1chr6NT_033172AL021368716706773AQ5375911RP11-343C19
S/G/Y/R/B/O NT_006679AC093279362343003AQ5611231chr6NT_033172AL021368716578313AQ901459-1CTD-2087I4
S/G/Y/R/B/O NT_006679AC093279362343003AQ5611231chr6NT_007592AL133255333137273AQ901459-1CTD-2087I4
S/G/Y/R/B/O NT_006679AC114302363550353         6 confirm
S/G/Y/R/B/O NT_006679AC114302363612453AQ428460-1chr5NT_033113AC114934356816761AQ428462-1CTD-2562J13
S/G/Y/R/B/O NT_006679AC025754363837353         13 confirm
S/G/Y/R/B/O NT_006679AC025754363970673AQ474043-1chr5NT_033113AC114934356653441AQ4740421CTD-2601M11
S/G/Y/R/B/O NT_006679AC016602365159503         10 confirm
S/G/Y/R/B/O NT_006679AC026801365935243         22 confirm
S/G/Y/R/B/O NT_006679AC008795367708083         13 confirm
S/G/Y/R/B/O NT_006679AC010368368430923         22 confirm
S/G/Y/R/B/O NT_006679AC010375369777271         15 confirm
S/G/Y/R/B/O NT_006679AC091851369929751         2 confirm
S/G/Y/R/B/O NT_006679AC025769370035031         0 confirm
S/G/Y/R/B/O NT_006679AC025769375193401AQ6202391chr19NT_011139AC008537544614193AQ6203711RP11-758H10
S/G/Y/R/B/O NT_006679AC025769375226561B448351chr19NT_011139AC023172545822173B44836-1CTC-782I15
S/G/Y/R/B/O NT_006679AC025769375697471AQ283158-1chr19NT_011139AC008537544218483AQ629664-1RP11-79K6
S/G/Y/R/B/O NT_006679AC025769375710211AQ768280-1chr19NT_011139AC008537544098873AQ7748221CTD-3160B22
S/G/Y/R/B/O NT_006679AC025769375715281AQ4136331chr19NT_011139AC008962546207993AQ413632-1RP11-203N14
S/G/Y/R/B/O NT_006679AC025769375787471AQ6203711chr19NT_011139AC008537544721503AQ6202391RP11-758H10
S/G/Y/R/B/O NT_006679AC025769375787471AQ6203711chr19NT_011139AC008962546432573AQ620239-1RP11-758H10
S/G/Y/R/B/O NT_006679AC025769375853151AQ8175321chr19NT_011139AC010412541963833AQ7922101RP11-825A10
S/G/Y/R/B/O NT_006679AC025769376150511AQ629664-1chr19NT_011139AC008537544217943AQ283158-1RP11-79K6
S/G/Y/R/B/O NT_006679AC025769376150511AQ629664-1chr19NT_011139AC008537544524043AQ283158-1RP11-79K6
S/G/Y/R/B/O NT_006679AC025769376160521AQ746225-1chr19NT_011139AC010412543138893AQ7453841CTD-2276I23
S/G/Y/R/B/O NT_006679AC025769376383781AQ3534871chr19NT_011139AC008962547244403AQ353485-1CTD-2535H15
S/G/Y/R/B/O NT_006679AC025769376127081AQ6302961chr19NT_011139AC023172545909823AQ630294-1RP11-469J12
S/G/Y/R/B/O NT_006679AC025769376149971AQ283158-1chr19NT_011139AC008537544218483AQ629664-1RP11-79K6
S/G/Y/R/B/O NT_006679AC026731371081423         10 confirm
S/G/Y/R/B/O NT_006679AC027347371317753         7 confirm
S/G/Y/R/B/O NT_006679AC008929372736243         6 confirm
S/G/Y/R/B/O NT_006679AC034179373144821         4 confirm
S/G/Y/R/B/O NT_006679AC116365373307271         4 confirm
S/G/Y/R/B/O NT_006679AC025448373908152         6 confirm