Home    Genome Browser    BLAT Search    Help
  Chromosome 5 - BAC End Pairs - Single Contig
 
Description of this page Main Reports Page Main Assembly Page Main BAC End Pairs Page Whole Chromosome Single Contigs

Line color code:

  • White: lists number of confirming clone bridges for this accession
  • Blue: clone bridges two adjacent contigs
  • Green: clone bridges close contigs
  • Pink: multiple clones bridge distant regions on same chromosome
  • Red: multiple clones bridge regions on different chromosomes
NT_033086 NT_023089 NT_006576 NT_033103 NT_029977 NT_016779 NT_033104 NT_023110
NT_033119 NT_023097 NT_023084 NT_023115 NT_023315 NT_033112 NT_006547 NT_023162
NT_006577 NT_023114 NT_023216 NT_023124 NT_026281 NT_023085 NT_033113 NT_033110
NT_006679 NT_023195 NT_033085 NT_006702 NT_023098 NT_028188 NT_031794 NT_023102
NT_023081 NT_006693 NT_016864 NT_033115 NT_033092 NT_006665 NT_006497 NT_006431
NT_033093 NT_006790 NT_006713 NT_026283 NT_023083 NT_033077 NT_033111 NT_033079
NT_007022 NT_006540 NT_030680 NT_029973 NT_028179 NT_033118 NT_006731 NT_023148
NT_023290 NT_033094 NT_033116 NT_006654 NT_033095 NT_033098 NT_033082 NT_033096
NT_023091 NT_006789 NT_033108 NT_006899 NT_006780 NT_030685 NT_025721 NT_033106
NT_025702 NT_023192 NT_029295 NT_033097 NT_016755 NT_029975 NT_033083 NT_033084
NT_023238 NT_033105 NT_007072 NT_033091 NT_016714 NT_006859 NT_006489 NT_029289
NT_033078 NT_023269 NT_023248 NT_030691 NT_006788 NT_030698 NT_033117 NT_033080
NT_023133 NT_006907 NT_023132 NT_033089 NT_006725 NT_023093 NT_006802 NT_006932
NT_006519


  NT_016755
 
LinksContig1Acc1Start1 PhsBAC End Acc1Or1Chr2Contig2Acc2Start2 PhsBAC End Acc2Or2Clone
S/G/Y/R/B/O NT_016755AC0106111266481181         0 confirm
S/G/Y/R/B/O NT_016755AC0227121266534841         0 confirm
S/G/Y/R/B/O NT_016755AC0227121266542501AQ493983-1chr5NT_016755AC0267231288119193AQ4965611RP11-710L4
S/G/Y/R/B/O NT_016755AC0227121266547201AQ140933-1chr5NT_016755AC0084331289246763AQ1873751CTD-3126P12
S/G/Y/R/B/O NT_016755AC1067571266774561         2 confirm
S/G/Y/R/B/O NT_016755AC0214631266878211         6 confirm
S/G/Y/R/B/O NT_016755AC0214631306537721AQ628880-1chr5NT_016755AC0086691284750703AQ6288781RP11-479K18
S/G/Y/R/B/O NT_016755AC0214631306573541AQ512389-1chr5NT_016755AC0086691284969393AQ4563321RP11-690G4
S/G/Y/R/B/O NT_016755AC0214631307129601AQ264427-1chr5NT_016755AC0086691285242853AQ2644241CTD-2504P8
S/G/Y/R/B/O NT_016755AC0214631285907101AQ1131811chr5NT_016755AC1100031307260491AQ113182-1CTD-2360H2
S/G/Y/R/B/O NT_016755AC0108021267012531         1 confirm
S/G/Y/R/B/O NT_016755AC0108021307979441AQ520444-1chr5NT_033106AC1142791235473481AQ4673221RP11-777C8
S/G/Y/R/B/O NT_016755AC0108021267044621AQ8374871chr5NT_016755AC0932061308671253AQ837381-1RP11-793M15
S/G/Y/R/B/O NT_016755AC0108021267044801AQ3416961chr5NT_016755AC0084441308719753AQ341694-1RP11-120J14
S/G/Y/R/B/O NT_016755AC0108021267069741AQ0462901chr5NT_016755AC0084441308723983AQ046289-1RP11-33O19
S/G/Y/R/B/O NT_016755AC0108021267069781AQ4535941chr5NT_016755AC0084441308930783AQ410134-1RP11-659D3
S/G/Y/R/B/O NT_016755AC1143111267177671         2 confirm
S/G/Y/R/B/O NT_016755AC1143111295578851AQ5526251chr5NT_033106AC1142791235822021AQ5322971RP11-381O9
S/G/Y/R/B/O NT_016755AC1143111295579481AQ6376721chr5NT_033106AC1142791235822161AQ6376701RP11-468L20
S/G/Y/R/B/O NT_016755AC1143111267290611AQ5497091chr5NT_016755AC0084441308714173AQ535519-1RP11-410H17
S/G/Y/R/B/O NT_016755AC1143111267299421AQ2432041chr5NT_016755AC0932061308319883AQ247647-1CTD-2055P18
S/G/Y/R/B/O NT_016755AC1143111267441531AQ4797091chr5NT_016755AC0084441309300213AQ507426-1RP11-273O5
S/G/Y/R/B/O NT_016755AC0086931267640723         3 confirm
S/G/Y/R/B/O NT_016755AC0267201268431133         4 confirm
S/G/Y/R/B/O NT_016755AC0267201268625063AQ5423791chr5NT_016755AC0210801275433283AQ542381-1RP11-347F6
S/G/Y/R/B/O NT_016755AC0267201268655163AQ6096351chr5NT_016755AC0210801275395273AQ429775-1RP11-655I22
S/G/Y/R/B/O NT_016755AC0267201268885083AQ2756401chr5NT_016755AC0210801276181103AQ275639-1CTD-2518I16
S/G/Y/R/B/O NT_016755AC0267201269260763AQ4203961chr5NT_016755AC0210801275970243AQ420400-1RP11-179H22
S/G/Y/R/B/O NT_016755AC0267201269503253AQ0625361chr5NT_016755AC0210801276015693AQ062535-1CTD-2346F7
S/G/Y/R/B/O NT_016755AC0267201269543583AQ4871151chr5NT_016755AC0267731276332993AQ487118-1RP11-265H6
S/G/Y/R/B/O NT_016755AC0267201269589883AQ3939921chr5NT_016755AC0267731276382113AQ393995-1CTD-2547K9
S/G/Y/R/B/O NT_016755AC0267201269640983AQ4718811chr5NT_016755AC0267731276545513AQ471879-1CTD-2587B14
S/G/Y/R/B/O NT_016755AC0267201269782013AQ0401471chr5NT_016755AC0267731276449783AQ040145-1CTD-2333L19
S/G/Y/R/B/O NT_016755AC0085801269942032         1 confirm
S/G/Y/R/B/O NT_016755AC0085801269945832AQ4812211chr5NT_016755AC0085411276997383AQ481225-1RP11-257D8
S/G/Y/R/B/O NT_016755AC0210761270136633         10 confirm
S/G/Y/R/B/O NT_016755AC0224491271057313         21 confirm
S/G/Y/R/B/O NT_016755AC0165561272492233         20 confirm
S/G/Y/R/B/O NT_016755AC0254651273415482         11 confirm
S/G/Y/R/B/O NT_016755AC0104071273933832         3 confirm
S/G/Y/R/B/O NT_016755AC1121961274841581         1 confirm
S/G/Y/R/B/O NT_016755AC1133571274882971         8 confirm
S/G/Y/R/B/O NT_016755AC0085121275073173         1 confirm
S/G/Y/R/B/O NT_016755AC0210801275230173         5 confirm
S/G/Y/R/B/O NT_016755AC0210801275433283AQ542381-1chr5NT_016755AC0267201268625063AQ5423791RP11-347F6
S/G/Y/R/B/O NT_016755AC0210801275395273AQ429775-1chr5NT_016755AC0267201268655163AQ6096351RP11-655I22
S/G/Y/R/B/O NT_016755AC0210801276181103AQ275639-1chr5NT_016755AC0267201268885083AQ2756401CTD-2518I16
S/G/Y/R/B/O NT_016755AC0210801275970243AQ420400-1chr5NT_016755AC0267201269260763AQ4203961RP11-179H22
S/G/Y/R/B/O NT_016755AC0210801276015693AQ062535-1chr5NT_016755AC0267201269503253AQ0625361CTD-2346F7
S/G/Y/R/B/O NT_016755AC0267731276182613         6 confirm


  NT_016755 (cont)
 
LinksContig1Acc1Start1 PhsBAC End Acc1Or1Chr2Contig2Acc2Start2 PhsBAC End Acc2Or2Clone
S/G/Y/R/B/O NT_016755AC0267731276332993AQ487118-1chr5NT_016755AC0267201269543583AQ4871151RP11-265H6
S/G/Y/R/B/O NT_016755AC0267731276382113AQ393995-1chr5NT_016755AC0267201269589883AQ3939921CTD-2547K9
S/G/Y/R/B/O NT_016755AC0267731276545513AQ471879-1chr5NT_016755AC0267201269640983AQ4718811CTD-2587B14
S/G/Y/R/B/O NT_016755AC0267731276449783AQ040145-1chr5NT_016755AC0267201269782013AQ0401471CTD-2333L19
S/G/Y/R/B/O NT_016755AC0085411276819953         19 confirm
S/G/Y/R/B/O NT_016755AC0085411276997383AQ481225-1chr5NT_016755AC0085801269945832AQ4812211RP11-257D8
S/G/Y/R/B/O NT_016755AC0264221278173943         6 confirm
S/G/Y/R/B/O NT_016755AC1067921278708503         15 confirm
S/G/Y/R/B/O NT_016755AC0103691279500773         14 confirm
S/G/Y/R/B/O NT_016755AC0104931280728103         10 confirm
S/G/Y/R/B/O NT_016755AC0085481281666722         5 confirm
S/G/Y/R/B/O NT_016755AC0086061281971562         0 confirm
S/G/Y/R/B/O NT_016755AC0239741282018611         4 confirm
S/G/Y/R/B/O NT_016755AC1067861282342203         12 confirm
S/G/Y/R/B/O NT_016755AC0221161283383993         9 confirm
S/G/Y/R/B/O NT_016755AC0086691283895203         14 confirm
S/G/Y/R/B/O NT_016755AC0086691284750703AQ6288781chr5NT_016755AC0214631306537721AQ628880-1RP11-479K18
S/G/Y/R/B/O NT_016755AC0086691284766713AQ6284001chr5NT_016755AC1100031307273451AQ628402-1CTD-2651I18
S/G/Y/R/B/O NT_016755AC0086691284969393AQ4563321chr5NT_016755AC0214631306573541AQ512389-1RP11-690G4
S/G/Y/R/B/O NT_016755AC0086691285242853AQ2644241chr5NT_016755AC0214631307129601AQ264427-1CTD-2504P8
S/G/Y/R/B/O NT_016755AC0103721286153443         10 confirm
S/G/Y/R/B/O NT_016755AC0103721286298843AQ457835-1chr5NT_016755AC0210821318437203AQ6199681RP11-756H20
S/G/Y/R/B/O NT_016755AC0105871287405183         3 confirm
S/G/Y/R/B/O NT_016755AC0267231287820653         15 confirm
S/G/Y/R/B/O NT_016755AC0267231288119193AQ4965611chr5NT_016755AC0227121266542501AQ493983-1RP11-710L4
S/G/Y/R/B/O NT_016755AC0084331289077503         11 confirm
S/G/Y/R/B/O NT_016755AC0084331289246763AQ1873751chr5NT_016755AC0227121266547201AQ140933-1CTD-3126P12
S/G/Y/R/B/O NT_016755AC0932451289856003         13 confirm
S/G/Y/R/B/O NT_016755AC0102351290291233         25 confirm
S/G/Y/R/B/O NT_016755AC0085461292352323         10 confirm
S/G/Y/R/B/O NT_016755AC0935351293034213         9 confirm
S/G/Y/R/B/O NT_016755AC0995131294266993         4 confirm
S/G/Y/R/B/O NT_016755AC0231961295299471         0 confirm
S/G/Y/R/B/O NT_016755AC0932421295349121         0 confirm
S/G/Y/R/B/O NT_016755AC0932421295353901AQ552625-1chr5NT_033106AC1142791235822021AQ5322971RP11-381O9
S/G/Y/R/B/O NT_016755AC0932421295354411AQ637672-1chr5NT_033106AC1142791235822161AQ6376701RP11-468L20
S/G/Y/R/B/O NT_016755AC0932421295359781AQ0818441chr5NT_016755AC0084441309725613AQ081845-1RP11-55P19
S/G/Y/R/B/O NT_016755AC0932421295399501AQ5503551chr5NT_016755AC0104621310042843AQ550353-1RP11-432G18
S/G/Y/R/B/O NT_016755AC0935211295425662         6 confirm
S/G/Y/R/B/O NT_016755AC0935211299332242B39701-1chr5NT_029295AC0342191262517523B397001CTC-772O19
S/G/Y/R/B/O NT_016755AC0935211299470752AQ677435-1chr5NT_029295AC0342191262604933AQ6775251RP11-1105E10
S/G/Y/R/B/O NT_016755AC0935211299690382AQ405041-1chr5NT_029295AC0940961262773323AQ4049481RP11-624D8
S/G/Y/R/B/O NT_016755AC0935211299641472AQ347698-1chr5NT_029295AC0940961262912203AQ3805341RP11-137E15
S/G/Y/R/B/O NT_016755AC0935211299571352AQ784986-1chr5NT_029295AC0940961263000163AQ8240381CTD-3141C23
S/G/Y/R/B/O NT_016755AC0935211299740192AQ343533-1chr5NT_029295AC0940961263001283AQ3435361RP11-124H5
S/G/Y/R/B/O NT_016755AC0935211299689872AQ699311-1chr5NT_029295AC0940961263076083AQ7083551RP11-1145M18
S/G/Y/R/B/O NT_016755AC0935211299330812AQ112780-1chr5NT_029295AC0940961263092403AQ1164381CTD-2374K14
S/G/Y/R/B/O NT_016755AC0935211299709062AQ668315-1chr5NT_029295AC0940961263092713AQ6924501CTD-2125F8
S/G/Y/R/B/O NT_016755AC0935211299929262AQ212881-1chr5NT_029295AC0940961263154443AQ1419091CTD-3173A22
S/G/Y/R/B/O NT_016755AC0935211299507322B74788-1chr5NT_029295AC0940961263310533B747891CTD-2042F19


  NT_016755 (cont)
 
LinksContig1Acc1Start1 PhsBAC End Acc1Or1Chr2Contig2Acc2Start2 PhsBAC End Acc2Or2Clone
S/G/Y/R/B/O NT_016755AC0935211300072452AQ354114-1chr5NT_029295AC0940961263680813AQ3541121CTD-2537P23
S/G/Y/R/B/O NT_016755AC0166761295598551         0 confirm
S/G/Y/R/B/O NT_016755AC1094641295634001         2 confirm
S/G/Y/R/B/O NT_016755AC0932201296132011         2 confirm
S/G/Y/R/B/O NT_016755AC1094501296541432         7 confirm
S/G/Y/R/B/O NT_016755AC1133981297152252         9 confirm
S/G/Y/R/B/O NT_016755AC0102551300315823         20 confirm
S/G/Y/R/B/O NT_016755AC0102551300327143AQ801871-1chr5NT_029295AC0940961263096613AQ7133111RP11-977D4
S/G/Y/R/B/O NT_016755AC0102551300504953AQ261980-1chr5NT_029295AC0940961263306883AQ2619771CTD-2507K4
S/G/Y/R/B/O NT_016755AC0102551300608533AQ777953-1chr5NT_029295AC0940961263612003AQ7682251CTD-3089H21
S/G/Y/R/B/O NT_016755AC0084361302466933         16 confirm
S/G/Y/R/B/O NT_016755AC1133491303534961         6 confirm
S/G/Y/R/B/O NT_016755AC0994981303794302         12 confirm
S/G/Y/R/B/O NT_016755AC0221011305250593         2 confirm
S/G/Y/R/B/O NT_016755AC1100031306163221         4 confirm
S/G/Y/R/B/O NT_016755AC1100031307273451AQ628402-1chr5NT_016755AC0086691284766713AQ6284001CTD-2651I18
S/G/Y/R/B/O NT_016755AC1100031307260491AQ113182-1chr5NT_016755AC0214631285907101AQ1131811CTD-2360H2
S/G/Y/R/B/O NT_016755AC0932061308029943         4 confirm
S/G/Y/R/B/O NT_016755AC0932061308648113AQ407050-1chr5NT_033106AC1142791235820791AQ4296631RP11-652C12
S/G/Y/R/B/O NT_016755AC0932061308223973AQ552625-1chr5NT_033106AC1142791235822021AQ5322971RP11-381O9
S/G/Y/R/B/O NT_016755AC0932061308224483AQ637672-1chr5NT_033106AC1142791235822161AQ6376701RP11-468L20
S/G/Y/R/B/O NT_016755AC0932061308300573B39056-1chr5NT_033106AC1142791236156931B390571CTC-771A23
S/G/Y/R/B/O NT_016755AC0932061308461333B63328-1chr5NT_033106AC1142791236219321B478441RP11-2N5
S/G/Y/R/B/O NT_016755AC0932061308671253AQ837381-1chr5NT_033106AC1142791236394831AQ837487-1RP11-793M15
S/G/Y/R/B/O NT_016755AC0932061308671253AQ837381-1chr5NT_016755AC0108021267044621AQ8374871RP11-793M15
S/G/Y/R/B/O NT_016755AC0932061308319883AQ247647-1chr5NT_016755AC1143111267299421AQ2432041CTD-2055P18
S/G/Y/R/B/O NT_016755AC0084441308684203         13 confirm
S/G/Y/R/B/O NT_016755AC0084441308930783AQ410134-1chr5NT_033106AC1142791236368921AQ453594-1RP11-659D3
S/G/Y/R/B/O NT_016755AC0084441308723983AQ046289-1chr5NT_033106AC1142791236370171AQ046290-1RP11-33O19
S/G/Y/R/B/O NT_016755AC0084441308719753AQ341694-1chr5NT_033106AC1142791236391871AQ341696-1RP11-120J14
S/G/Y/R/B/O NT_016755AC0084441308719753AQ341694-1chr5NT_016755AC0108021267044801AQ3416961RP11-120J14
S/G/Y/R/B/O NT_016755AC0084441308723983AQ046289-1chr5NT_016755AC0108021267069741AQ0462901RP11-33O19
S/G/Y/R/B/O NT_016755AC0084441308930783AQ410134-1chr5NT_016755AC0108021267069781AQ4535941RP11-659D3
S/G/Y/R/B/O NT_016755AC0084441308714173AQ535519-1chr5NT_016755AC1143111267290611AQ5497091RP11-410H17
S/G/Y/R/B/O NT_016755AC0084441309300213AQ507426-1chr5NT_016755AC1143111267441531AQ4797091RP11-273O5
S/G/Y/R/B/O NT_016755AC0084441309725613AQ081845-1chr5NT_016755AC0932421295359781AQ0818441RP11-55P19
S/G/Y/R/B/O NT_016755AC0104621309759733         6 confirm
S/G/Y/R/B/O NT_016755AC0104621310042843AQ550353-1chr5NT_016755AC0932421295399501AQ5503551RP11-432G18
S/G/Y/R/B/O NT_016755AC0086291310878893         6 confirm
S/G/Y/R/B/O NT_016755AC0086291312173803AQ6997161chr5NT_025702AC0273201236935953AQ699543-1RP11-1145G23
S/G/Y/R/B/O NT_016755AC0170441312207391         0 confirm
S/G/Y/R/B/O NT_016755AC0170441312885501AQ0587921chr5NT_025702AC0273201237226083AQ058789-1RP11-52G8
S/G/Y/R/B/O NT_016755AC1094581312221012         0 confirm
S/G/Y/R/B/O NT_016755AC0447961312795772         0 confirm
S/G/Y/R/B/O NT_016755AC1100091313386912         3 confirm
S/G/Y/R/B/O NT_016755AC1143181313943062         14 confirm
S/G/Y/R/B/O NT_016755AC0133901315363901         7 confirm
S/G/Y/R/B/O NT_016755AC0162821315646541         13 confirm
S/G/Y/R/B/O NT_016755AC1094711316393273         8 confirm
S/G/Y/R/B/O NT_016755AC1094431316962363         13 confirm


  NT_016755 (cont)
 
LinksContig1Acc1Start1 PhsBAC End Acc1Or1Chr2Contig2Acc2Start2 PhsBAC End Acc2Or2Clone
S/G/Y/R/B/O NT_016755AC0210821318192733         3 confirm
S/G/Y/R/B/O NT_016755AC0210821318437203AQ6199681chr5NT_016755AC0103721286298843AQ457835-1RP11-756H20
S/G/Y/R/B/O NT_016755AC0246221318773931         1 confirm
S/G/Y/R/B/O NT_016755AC1163621318848961         2 confirm
S/G/Y/R/B/O NT_016755AC0246301318889661         0 confirm