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  Chromosome 21 - Clone Overlaps - Single Contig
 
Description of this page Main Reports Page Main Assembly Page Main Overlap Page Whole Chromosome Single Contigs

Line color code:

  • White: overlap with immediately succeeding clone
  • Green: overlap with clone in same contig
  • Pink: overlap with clone in same chromosome, different contig
  • Red: overlap with clone on different chromosome
  • Yellow: overlap with clone not used in assembly

NT_029490 NT_011512 NT_030187 NT_030188 NT_011515


  NT_011515
 
LinksContig1Acc1Start1PhsChr2Contig2Acc2Start2PhsStrong OverlapMedium OverlapWeak OverlapTotal Overlap
S/G/Y/R/B/O NT_011515AP001046411938763chr21NT_011515AP0010474135193930000
S/G/Y/R/B/O NT_011515AP001046411938763  AC01873440472336127101084580111681
S/G/Y/R/B/O NT_011515AP001046411938763  AL16329640472336315806300158063
S/G/Y/R/B/O NT_011515AP001046411938763  AP00175140472336315806300158063
S/G/Y/R/B/O NT_011515AP001047413519393chr21NT_011515AP0010484138715130000
S/G/Y/R/B/O NT_011515AP001047413519393  AC012140404723361149870014987
S/G/Y/R/B/O NT_011515AP001047413519393  AC0187344047233611498801405529043
S/G/Y/R/B/O NT_011515AP001047413519393  AL163296404723363381020038102
S/G/Y/R/B/O NT_011515AP001047413519393  AP001751404723363381020038102
S/G/Y/R/B/O NT_011515AP001048413871513chr21NT_011515AP0010494140327230000
S/G/Y/R/B/O NT_011515AP001048413871513  AC018734404723361165000016500
S/G/Y/R/B/O NT_011515AP001048413871513  AC019224404723361165010016501
S/G/Y/R/B/O NT_011515AP001048413871513  AL163296404723363165770016577
S/G/Y/R/B/O NT_011515AP001048413871513  AP001751404723363165770016577
S/G/Y/R/B/O NT_011515AP001049414032723chr21NT_011515AP0010504143664030000
S/G/Y/R/B/O NT_011515AP001049414032723  AC012140404723361164152156112219693
S/G/Y/R/B/O NT_011515AP001049414032723  AC019224404723361365560036556
S/G/Y/R/B/O NT_011515AP001050414366403chr21NT_011515AP0010514151495030000
S/G/Y/R/B/O NT_011515AP001050414366403  AC012140404723361633285058274871134
S/G/Y/R/B/O NT_011515AP001050414366403  AL163296404723363989640098964
S/G/Y/R/B/O NT_011515AP001050414366403  AP001751404723363989640098964
S/G/Y/R/B/O NT_011515AP001051415149503chr21NT_011515AP0010524157200130000
S/G/Y/R/B/O NT_011515AP001051415149503  AC003656404723361409830040983
S/G/Y/R/B/O NT_011515AP001051415149503  AL163296404723363462740046274
S/G/Y/R/B/O NT_011515AP001051415149503  AL163297404723363396300039630
S/G/Y/R/B/O NT_011515AP001051415149503  AP001751404723363462740046274
S/G/Y/R/B/O NT_011515AP001051415149503  AP001752404723363396300039630
S/G/Y/R/B/O NT_011515AP001052415720013chr21NT_011515AP0010534169973230000
S/G/Y/R/B/O NT_011515AP001052415720013  AC003656404723361613350585267187
S/G/Y/R/B/O NT_011515AP001052415720013  AL16329740472336314554000145540
S/G/Y/R/B/O NT_011515AP001052415720013  AP00175240472336314554000145540
S/G/Y/R/B/O NT_011515AP001053416997323chr21NT_011515AP0010544184606430000
S/G/Y/R/B/O NT_011515AP001053416997323  AC0036564047233612103003520756237
S/G/Y/R/B/O NT_011515AP001053416997323  AL16329740472336316191900161919
S/G/Y/R/B/O NT_011515AP001053416997323  AP00175240472336316191900161919
S/G/Y/R/B/O NT_011515AP001054418460643chr21NT_011515AB0015234194092730000
S/G/Y/R/B/O NT_011515AP001054418460643  AC0036564047233614828301072859011
S/G/Y/R/B/O NT_011515AP001054418460643  AL163297404723363523140052314
S/G/Y/R/B/O NT_011515AP001054418460643  AL163298404723363695570069557
S/G/Y/R/B/O NT_011515AP001054418460643  AP001752404723363523140052314
S/G/Y/R/B/O NT_011515AP001054418460643  AP001753404723363695570069557
S/G/Y/R/B/O NT_011515AB001523419409273chr21NT_011515AB0015174203554330000
S/G/Y/R/B/O NT_011515AB001523419409273  AC0036564047233613139726551994854000
S/G/Y/R/B/O NT_011515AB001523419409273  AL16329840472336312262000122620
S/G/Y/R/B/O NT_011515AB001523419409273  AP00175340472336312262000122620
S/G/Y/R/B/O NT_011515AB001517420355433chr21NT_011515AP0010554206999430000
S/G/Y/R/B/O NT_011515AB001517420355433  AL163298404723363430490043049
S/G/Y/R/B/O NT_011515AB001517420355433  AP001753404723363430490043049
S/G/Y/R/B/O NT_011515AB001517420355433  U56088404723363112230011223
S/G/Y/R/B/O NT_011515AP001055420699943chr21NT_011515AP0010564210048030000
S/G/Y/R/B/O NT_011515AP001055420699943  AL163298404723363364830036483
S/G/Y/R/B/O NT_011515AP001055420699943  AP001753404723363364830036483
S/G/Y/R/B/O NT_011515AP001056421004803chr21NT_011515AP0010574212684330000
S/G/Y/R/B/O NT_011515AP001056421004803  AC003656404723361267140180628520
S/G/Y/R/B/O NT_011515AP001056421004803  AL163298404723363362460036246
S/G/Y/R/B/O NT_011515AP001056421004803  AP001753404723363362460036246
S/G/Y/R/B/O NT_011515AP001057421268433chr21NT_011515AP0010584213040530000
S/G/Y/R/B/O NT_011515AP001058421304053chr21NT_011515AP0010594216985930000
S/G/Y/R/B/O NT_011515AP001058421304053  AL163298404723363395490039549
S/G/Y/R/B/O NT_011515AP001058421304053  AP001753404723363395490039549
S/G/Y/R/B/O NT_011515AP001059421698593chr21NT_011515AP0010604219521030000
S/G/Y/R/B/O NT_011515AP001059421698593  AL163298404723363362300036230
S/G/Y/R/B/O NT_011515AP001059421698593  AP001753404723363362300036230
S/G/Y/R/B/O NT_011515AP001060421952103chr21NT_011515AP0010614222800530000
S/G/Y/R/B/O NT_011515AP001060421952103  AB006684404723363200000020000
S/G/Y/R/B/O NT_011515AP001060421952103  AJ009610404723363362200036220
S/G/Y/R/B/O NT_011515AP001060421952103  AL163298404723363254960025496
S/G/Y/R/B/O NT_011515AP001060421952103  AL163299404723363176370017637
S/G/Y/R/B/O NT_011515AP001060421952103  AP001753404723363254960025496
S/G/Y/R/B/O NT_011515AP001060421952103  AP001754404723363176370017637
S/G/Y/R/B/O NT_011515AP001061422280053chr21NT_011515AP0010624224251030000
S/G/Y/R/B/O NT_011515AP001061422280053  AC003656404723361157630015763
S/G/Y/R/B/O NT_011515AP001061422280053  AL163299404723363158400015840
S/G/Y/R/B/O NT_011515AP001061422280053  AP001754404723363158400015840
S/G/Y/R/B/O NT_011515AP001062422425103chr21NT_011515AP0010634227322330000
S/G/Y/R/B/O NT_011515AP001062422425103  AL163299404723363369310036931
S/G/Y/R/B/O NT_011515AP001062422425103  AP001754404723363369310036931
S/G/Y/R/B/O NT_011515AP001063422732233chr21NT_011515AP0010644231192930000
S/G/Y/R/B/O NT_011515AP001063422732233  AL163299404723363453110045311
S/G/Y/R/B/O NT_011515AP001063422732233  AP001754404723363453110045311
S/G/Y/R/B/O NT_011515AP001064423119293chr21NT_011515AP001065423447323243090024309
S/G/Y/R/B/O NT_011515AP001064423119293  AL163299404723363369170036917
S/G/Y/R/B/O NT_011515AP001064423119293  AP001754423447323369170036917
S/G/Y/R/B/O NT_011515AP001065423447323chr21NT_011515AP0010664243533530000
S/G/Y/R/B/O NT_011515AP001065423447323  AC003656423447321240980024098
S/G/Y/R/B/O NT_011515AP001065423447323  AC026998423447321204792406132124206
S/G/Y/R/B/O NT_011515AP001065423447323  AL16329942344732311579300115793
S/G/Y/R/B/O NT_011515AP001065423447323  AP00175442311929311579300115793
S/G/Y/R/B/O NT_011515AP001066424353353chr21NT_011515AP0010674246104630000
S/G/Y/R/B/O NT_011515AP001066424353353  AC026998423119291241910024191
S/G/Y/R/B/O NT_011515AP001066424353353  AL163299423119293392030039203
S/G/Y/R/B/O NT_011515AP001066424353353  AP001754423119293392030039203
S/G/Y/R/B/O NT_011515AP001067424610463chr21NT_011515AJ011930425885583979710097971
S/G/Y/R/B/O NT_011515AP001067424610463  AC003656423119291287520028752
S/G/Y/R/B/O NT_011515AP001067424610463  AC026998423119291105463110111394117868
S/G/Y/R/B/O NT_011515AP001067424610463  AL16329942588558310955900109559
S/G/Y/R/B/O NT_011515AP001067424610463  AP00175442588558310955900109559
S/G/Y/R/B/O NT_011515AJ011930425885583chr21NT_011515AJ2393254282361530000
S/G/Y/R/B/O NT_011515AJ011930425885583  AC01178242588558115966984008565176634
S/G/Y/R/B/O NT_011515AJ011930425885583  AC0269984258855817585511005139488254
S/G/Y/R/B/O NT_011515AJ011930425885583  AL163299425885583591710059171
S/G/Y/R/B/O NT_011515AJ011930425885583  AL16330042588558327512700275127
S/G/Y/R/B/O NT_011515AJ011930425885583  AP00106842461046312079500120795
S/G/Y/R/B/O NT_011515AJ011930425885583  AP001754424610463591710059171
S/G/Y/R/B/O NT_011515AJ239325428236153chr21NT_011515AP0015054289391630000
S/G/Y/R/B/O NT_011515AJ239325428236153  AJ239327424610461391770039177
S/G/Y/R/B/O NT_011515AJ239325428236153  AL163300424610463675420067542
S/G/Y/R/B/O NT_011515AP001505428939163chr21NT_011515AP0015794296347530000
S/G/Y/R/B/O NT_011515AP001505428939163chr21NT_011515AL163301431398923702810070281
S/G/Y/R/B/O NT_011515AP001579429634753chr21NT_011515AL1334994310150630000
S/G/Y/R/B/O NT_011515AP001579429634753chr21NT_011515AL16330143139892313916300139163
S/G/Y/R/B/O NT_011515AL133499431015063chr21NT_011515AL16330143139892312885300128853
S/G/Y/R/B/O NT_011515AL163301431398923chr21NT_011515AL1633024322704230000
S/G/Y/R/B/O NT_011515AL163301431398923chr21NT_011515AP001505428939163702810070281
S/G/Y/R/B/O NT_011515AL163301431398923chr21NT_011515AP00157942963475313916300139163
S/G/Y/R/B/O NT_011515AL163301431398923  AJ23932642823615212893000128930
S/G/Y/R/B/O NT_011515AL163302432270423chr21NT_011515AL1633034356604230000
S/G/Y/R/B/O NT_011515AL163302432270423  AJ239326429634752253512016053269565
S/G/Y/R/B/O NT_011515AL163302432270423  AL13349342963475213890500138905
S/G/Y/R/B/O NT_011515AL163303435660423chr21NT_011515AL13349243586564315415700154157
S/G/Y/R/B/O NT_011515AL163303435660423chr21NT_011515AJ011931437717983984340098434
S/G/Y/R/B/O NT_011515AL163303435660423chr21NT_011515AJ011932438765423295410029541
S/G/Y/R/B/O NT_011515AL163303435660423chr21NT_011515AJ239328438458413415640041564
S/G/Y/R/B/O NT_011515AL163303435660423chr21NT_011515AL592528437407213374230037423
S/G/Y/R/B/O NT_011515AL163303435660423  AL133493435865642821200082120
S/G/Y/R/B/O NT_011515AL163303435660423  AP000219437407213967490096749
S/G/Y/R/B/O NT_011515AL163303435660423  AP000341437407213967490096749
S/G/Y/R/B/O NT_011515AL163303435660423  AP000468437407213196280019628
S/G/Y/R/B/O NT_011515AL133492435865643chr21NT_011515AL5925284374072130000
S/G/Y/R/B/O NT_011515AL592528437407213chr21NT_011515AJ0119314377179830000
S/G/Y/R/B/O NT_011515AL592528437407213chr21NT_011515AL163303435660423374230037423
S/G/Y/R/B/O NT_011515AJ011931437717983chr21NT_011515AJ2393284384584130000
S/G/Y/R/B/O NT_011515AJ011931437717983chr21NT_011515AL163303435660423984340098434
S/G/Y/R/B/O NT_011515AJ239328438458413chr21NT_011515AJ0119324387654230000
S/G/Y/R/B/O NT_011515AJ239328438458413chr21NT_011515AL163303435660423415640041564
S/G/Y/R/B/O NT_011515AJ239328438458413  AP000219435660423411300041130
S/G/Y/R/B/O NT_011515AJ239328438458413  AP000341435660423411300041130
S/G/Y/R/B/O NT_011515AJ011932438765423chr21NT_011515AP0014794391312030000
S/G/Y/R/B/O NT_011515AJ011932438765423chr21NT_011515AL163303435660423295410029541
S/G/Y/R/B/O NT_011515AJ011932438765423  AL163304435660423130560013056
S/G/Y/R/B/O NT_011515AJ011932438765423  AP000468435660423196280019628
S/G/Y/R/B/O NT_011515AJ011932438765423  AP001759435660423130560013056
S/G/Y/R/B/O NT_011515AP001479439131203chr21NT_011515AP0014764395205630000
S/G/Y/R/B/O NT_011515AP001479439131203  AL163304435660423389360038936
S/G/Y/R/B/O NT_011515AP001479439131203  AP001759629648923389360038936
S/G/Y/R/B/O NT_011515AP001476439520563chr21NT_011515AP0014724398205430000
S/G/Y/R/B/O NT_011515AP001476439520563  AL163304455147533320250032025
S/G/Y/R/B/O NT_011515AP001476439520563  AP001759455147533320250032025
S/G/Y/R/B/O NT_011515AP001472439820543chr21NT_011515AP0014744400803630000
S/G/Y/R/B/O NT_011515AP001472439820543  AL163304455147533264670026467
S/G/Y/R/B/O NT_011515AP001472439820543  AP001759455147533264670026467
S/G/Y/R/B/O NT_011515AP001474440080363chr21NT_011515AP0014704401217630000
S/G/Y/R/B/O NT_011515AP001470440121763chr21NT_011515AP0014714401457430000
S/G/Y/R/B/O NT_011515AP001471440145743chr21NT_011515AP0014674402188030000
S/G/Y/R/B/O NT_011515AP001467440218803chr21NT_011515AP0011014402872130000
S/G/Y/R/B/O NT_011515AP001101440287213chr21NT_011515AP0014734405990030000
S/G/Y/R/B/O NT_011515AP001101440287213  AL163304455147533323300032330
S/G/Y/R/B/O NT_011515AP001101440287213  AP001759455147533323300032330
S/G/Y/R/B/O NT_011515AP001473440599003chr21NT_011515AP0014754406255730000
S/G/Y/R/B/O NT_011515AP001475440625573chr21NT_011515AP0014684407621130000
S/G/Y/R/B/O NT_011515AP001475440625573  AL163304455147533136970013697
S/G/Y/R/B/O NT_011515AP001475440625573  AP001759455147533136970013697
S/G/Y/R/B/O NT_011515AP001468440762113chr21NT_011515AP0014694414337430000
S/G/Y/R/B/O NT_011515AP001468440762113  AL163304455147533673320067332
S/G/Y/R/B/O NT_011515AP001468440762113  AP001759455147533673320067332
S/G/Y/R/B/O NT_011515AP001469441433743chr21NT_011515AP0004714419075430000
S/G/Y/R/B/O NT_011515AP001469441433743  AL163304455147533478590047859
S/G/Y/R/B/O NT_011515AP001469441433743  AP001759455147533478590047859
S/G/Y/R/B/O NT_011515AP000471441907543chr21NT_011515AP0014774426444930000
S/G/Y/R/B/O NT_011515AP000471441907543  AL163304455147533544020054402
S/G/Y/R/B/O NT_011515AP000471441907543  AL163305455147533216040021604
S/G/Y/R/B/O NT_011515AP000471441907543  AP001759455147533544020054402
S/G/Y/R/B/O NT_011515AP000471441907543  AP001760455147533216040021604
S/G/Y/R/B/O NT_011515AP001477442644493chr21NT_011515AP0003354430240530000
S/G/Y/R/B/O NT_011515AP001477442644493  AL163305455147533383990038399
S/G/Y/R/B/O NT_011515AP001477442644493  AP001760455147533383990038399
S/G/Y/R/B/O NT_011515AP000335443024053chr21NT_011515AP0003364432922330000
S/G/Y/R/B/O NT_011515AP000335443024053  AL163305455147533269190026919
S/G/Y/R/B/O NT_011515AP000335443024053  AP000215455147533269190026919
S/G/Y/R/B/O NT_011515AP000335443024053  AP001760455147533269190026919
S/G/Y/R/B/O NT_011515AP000336443292233chr21NT_011515AP0003374436459830000
S/G/Y/R/B/O NT_011515AP000336443292233  AL163305455147533362770036277
S/G/Y/R/B/O NT_011515AP000336443292233  AP000215455147533362770036277
S/G/Y/R/B/O NT_011515AP000336443292233  AP001760455147533362770036277
S/G/Y/R/B/O NT_011515AP000337443645983chr21NT_011515AP0003384441812730000
S/G/Y/R/B/O NT_011515AP000337443645983  AL163305455147533535530053553
S/G/Y/R/B/O NT_011515AP000337443645983  AP001760455147533535530053553
S/G/Y/R/B/O NT_011515AP000338444181273chr21NT_011515AP0003394449953830000
S/G/Y/R/B/O NT_011515AP000338444181273  AL163305455147533821160082116
S/G/Y/R/B/O NT_011515AP000338444181273  AP000216455147533821160082116
S/G/Y/R/B/O NT_011515AP000338444181273  AP001760455147533821160082116
S/G/Y/R/B/O NT_011515AP000339444995383chr21NT_011515AP0003404457721330000
S/G/Y/R/B/O NT_011515AP000339444995383  AL163305455147533777740077774
S/G/Y/R/B/O NT_011515AP000339444995383  AP000217455147533749080074908
S/G/Y/R/B/O NT_011515AP000339444995383  AP001760455147533777740077774
S/G/Y/R/B/O NT_011515AP000340445772133chr21NT_011515AP0014784461222330000
S/G/Y/R/B/O NT_011515AP000340445772133  AL163306481339323303770030377
S/G/Y/R/B/O NT_011515AP000340445772133  AP000217481339323260140026014
S/G/Y/R/B/O NT_011515AP000340445772133  AP001761481339323303770030377
S/G/Y/R/B/O NT_011515AP001478446122233         
S/G/Y/R/B/O NT_011515AP001478446122233  AL16330692241263103370010337
S/G/Y/R/B/O NT_011515AP001478446122233  AP00176192241263103370010337