Home    Genome Browser    BLAT Search    Help
  Chromosome 6 - Clone Overlaps - Single Contig
 
Description of this page Main Reports Page Main Assembly Page Main Overlap Page Whole Chromosome Single Contigs

Line color code:

  • White: overlap with immediately succeeding clone
  • Green: overlap with clone in same contig
  • Pink: overlap with clone in same chromosome, different contig
  • Red: overlap with clone on different chromosome
  • Yellow: overlap with clone not used in assembly
NT_033125 NT_033164 NT_033126 NT_033128 NT_033144 NT_033156 NT_033142 NT_033120
NT_033135 NT_033151 NT_033162 NT_033163 NT_033143 NT_033124 NT_033129 NT_033138
NT_033159 NT_026313 NT_033155 NT_033173 NT_033140 NT_033153 NT_023442 NT_033146
NT_033136 NT_033149 NT_033154 NT_033160 NT_033134 NT_029317 NT_007592 NT_033137
NT_033139 NT_033147 NT_033158 NT_033161 NT_033145 NT_033141 NT_033123 NT_033130
NT_033127 NT_033122 NT_033152 NT_033121 NT_033148 NT_033171 NT_033132 NT_033943
NT_033172 NT_033948 NT_033131 NT_033946 NT_007540 NT_023463 NT_007158 NT_029990
NT_023399 NT_033133 NT_007299 NT_019424 NT_007563 NT_033944 NT_033947 NT_030710
NT_025741 NT_027046 NT_023451 NT_029991 NT_007422 NT_007302 NT_007627 NT_007583


  NT_023451
 
LinksContig1Acc1Start1PhsChr2Contig2Acc2Start2PhsStrong OverlapMedium OverlapWeak OverlapTotal Overlap
S/G/Y/R/B/O NT_023451AL5839631620576143chr6NT_023451AL35885216213776032000002000
S/G/Y/R/B/O NT_023451AL3588521621377603chr6NT_023451AL355312162148914100100100
S/G/Y/R/B/O NT_023451AL3553121621489141chr6NT_023451AL58383516233749830000
S/G/Y/R/B/O NT_023451AL5838351623374983chr6NT_023451AL355497162384339300100100
S/G/Y/R/B/O NT_023451AL3554971623843393chr6NT_023451AL13889016259963630000
S/G/Y/R/B/O NT_023451AL3554971623843393  AF4071661623843393540510054051
S/G/Y/R/B/O NT_023451AL1388901625996363chr6NT_023451AL09670816260735830000
S/G/Y/R/B/O NT_023451AL0967081626073583chr6NT_023451AL35756116271436230000
S/G/Y/R/B/O NT_023451AL0967081626073583  AF407166162337498310708400107084
S/G/Y/R/B/O NT_023451AL3575611627143623chr6NT_023451AL031010162777618300100100
S/G/Y/R/B/O NT_023451AL0310101627776183chr6NT_023451AL451061162884677300100100
S/G/Y/R/B/O NT_023451AL4510611628846773chr6NT_023451AL450344162976080300100100
S/G/Y/R/B/O NT_023451AL4503441629760803chr6NT_023451AL45033916312598530000
S/G/Y/R/B/O NT_023451AL4503441629760803  AC024983162976080114258722620144849
S/G/Y/R/B/O NT_023451AL4503391631259853chr6NT_023451AL035086163189777300100100
S/G/Y/R/B/O NT_023451AL0350861631897773chr6NT_023451AL0496941633547673231890023189
S/G/Y/R/B/O NT_023451AL0350861631897773  AL359638163354767191439010053101492
S/G/Y/R/B/O NT_023451AL0496941633547673chr6NT_023451AL13326016345485030000
S/G/Y/R/B/O NT_023451AL0496941633547673  AL3596381631897771414530632147774
S/G/Y/R/B/O NT_023451AL1332601634548503chr6NT_023451AL13873316356405630000
S/G/Y/R/B/O NT_023451AL1387331635640563chr6NT_023451AL451072163629538300100100
S/G/Y/R/B/O NT_023451AL4510721636295383chr6NT_023451AL35653516363435130000
S/G/Y/R/B/O NT_023451AL3565351636343513chr6NT_023451AL03339216368731830198301983
S/G/Y/R/B/O NT_023451AL0333921636873183chr6NT_023451AL59041316377164730199301993
S/G/Y/R/B/O NT_023451AL5904131637716473chr6NT_023451AL59054316387458630000
S/G/Y/R/B/O NT_023451AL5904131637716473  AC023201880843861906765603107197350
S/G/Y/R/B/O NT_023451AL5905431638745863chr6NT_023451AL35949416395680230000
S/G/Y/R/B/O NT_023451AL5905431638745863  AC022899880843861580803789263364502
S/G/Y/R/B/O NT_023451AL5905431638745863  AC023201880843861573444036061380
S/G/Y/R/B/O NT_023451AL3594941639568023chr6NT_023451AL035695164069116300100100
S/G/Y/R/B/O NT_023451AL3594941639568023  AC0228998808438617429402261496908
S/G/Y/R/B/O NT_023451AL3594941639568023  AC044828880843861731359371554588051
S/G/Y/R/B/O NT_023451AL0356951640691163chr6NT_023451AL35631116418875330000
S/G/Y/R/B/O NT_023451AL0356951640691163  AC0448281640691161590607455204568560
S/G/Y/R/B/O NT_023451AL3563111641887533chr6NT_023451AL59099316425599930200002000
S/G/Y/R/B/O NT_023451AL3563111641887533  AC05881715831757012938101384543226
S/G/Y/R/B/O NT_023451AL5909931642559993chr6NT_023451AL04982116439368632000002000
S/G/Y/R/B/O NT_023451AL5909931642559993  AC058817164255999174546133481186199755
S/G/Y/R/B/O NT_023451AL0498211643936863chr6NT_023451AL078582164479391300100100
S/G/Y/R/B/O NT_023451AL0785821644793913chr6NT_023451AL45040116458818430000
S/G/Y/R/B/O NT_023451AL4504011645881843chr6NT_023451AL13883216459694530000
S/G/Y/R/B/O NT_023451AL1388321645969453chr6NT_023451AL35708116473585630000
S/G/Y/R/B/O NT_023451AL1388321645969453  AC0243661643936861113320105518640132511
S/G/Y/R/B/O NT_023451AL1388321645969453  AL3564801643936861440375278978359098
S/G/Y/R/B/O NT_023451AL3570811647358563chr6NT_023451AL04954816480664130000
S/G/Y/R/B/O NT_023451AL3570811647358563  AC0243701643936861556204898251563033
S/G/Y/R/B/O NT_023451AL3570811647358563  AL3564801643936861200308127028157
S/G/Y/R/B/O NT_023451AL0495481648066413chr6NT_023451AL59150716489301930199901999
S/G/Y/R/B/O NT_023451AL0495481648066413  AC0243701643936861785554533275885846
S/G/Y/R/B/O NT_023451AL5915071648930193chr6NT_023451AL58996316490860532000002000
S/G/Y/R/B/O NT_023451AL5899631649086053chr6NT_023451AL13607916499317030000
S/G/Y/R/B/O NT_023451AL5899631649086053  AC0228851649086051538844560363262076
S/G/Y/R/B/O NT_023451AL1360791649931703chr6NT_023451AL39096016508887030199801998
S/G/Y/R/B/O NT_023451AL1360791649931703  AC02288516489301918008810387274793222
S/G/Y/R/B/O NT_023451AL3909601650888703chr6NT_023451AL13335616517450730199901999
S/G/Y/R/B/O NT_023451AL3909601650888703  AC02288516508887011197123041192826203
S/G/Y/R/B/O NT_023451AL3909601650888703  AL3589921649931701406600040660
S/G/Y/R/B/O NT_023451AL1333561651745073chr6NT_023451AL16016216519893630000
S/G/Y/R/B/O NT_023451AL1333561651745073  AL3589921649931701263980026398
S/G/Y/R/B/O NT_023451AL1333561651745073  M330271650888703109470010947
S/G/Y/R/B/O NT_023451AL1601621651989363chr6NT_023451AL13326916528116530000
S/G/Y/R/B/O NT_023451AL1601621651989363  AL3589921650888701817470081747
S/G/Y/R/B/O NT_023451AL1332691652811653chr6NT_023451AL080276165371752300100100
S/G/Y/R/B/O NT_023451AL1332691652811653  AL3589921653717521542360054236
S/G/Y/R/B/O NT_023451AL0802761653717523chr6NT_023451AL356787165483375300100100
S/G/Y/R/B/O NT_023451AL3567871654833753chr6NT_023451AL356963165528076300100100
S/G/Y/R/B/O NT_023451AL3567871654833753chr11NT_030106AC015701628314311116230011623
S/G/Y/R/B/O NT_023451AL3569631655280763chr6NT_023451AL12196716561944530000
S/G/Y/R/B/O NT_023451AL3569631655280763chr11NT_030106AC015701628314311826383174085812
S/G/Y/R/B/O NT_023451AL3569631655280763chr11NT_030106AC01570362825100110217123701545438041
S/G/Y/R/B/O NT_023451AL1219671656194453chr6NT_023451AL59086716571121032000002000
S/G/Y/R/B/O NT_023451AL1219671656194453chr11NT_030106AC015701628314311577694811062580
S/G/Y/R/B/O NT_023451AL1219671656194453  AC0223581649705971850290085029
S/G/Y/R/B/O NT_023451AL5908671657112103chr6NT_023451AL35813416577283132000002000
S/G/Y/R/B/O NT_023451AL5908671657112103  AC0223581657112101617830128663069
S/G/Y/R/B/O NT_023451AL3581341657728313chr6NT_023451AL11851716591565930000
S/G/Y/R/B/O NT_023451AL3581341657728313  AC0213321657728311617232403064126
S/G/Y/R/B/O NT_023451AL3581341657728313  AC023863165772831112407217981424127294
S/G/Y/R/B/O NT_023451AL1185171659156593chr6NT_023451AL391426165993897300100100
S/G/Y/R/B/O NT_023451AL1185171659156593  AC0213321657112101711494961076110
S/G/Y/R/B/O NT_023451AL1185171659156593  AC0238631657112101301920030192
S/G/Y/R/B/O NT_023451AL3914261659938973chr6NT_023451AL60390816602153332000002000
S/G/Y/R/B/O NT_023451AL6039081660215333chr6NT_023451AL39137616611242932000002000
S/G/Y/R/B/O NT_023451AL3913761661124293chr6NT_023451AL13888816622503330000
S/G/Y/R/B/O NT_023451AL1388881662250333chr6NT_023451AL136094166247098300100100
S/G/Y/R/B/O NT_023451AL1360941662470983chr6NT_023451AL35985016640366530000
S/G/Y/R/B/O NT_023451AL1360941662470983chr6NT_023451AC021745169650270163685395354768185
S/G/Y/R/B/O NT_023451AL3598501664036653chr6NT_023451AL13644416643710130000
S/G/Y/R/B/O NT_023451AL3598501664036653chr6NT_023451AC0217451696502701334750033475
S/G/Y/R/B/O NT_023451AL1364441664371013chr6NT_023451AL13277416653331130000
S/G/Y/R/B/O NT_023451AL1364441664371013chr6NT_023451AC0217451696502701702750070275
S/G/Y/R/B/O NT_023451AL1364441664371013  AC0274391696502701589962555125262803
S/G/Y/R/B/O NT_023451AL1327741665333113chr6NT_023451AL44522016663131630000
S/G/Y/R/B/O NT_023451AL1327741665333113  AC0274391696502701891814166093347
S/G/Y/R/B/O NT_023451AL1327741665333113  AC0739821696502701224887719928739494
S/G/Y/R/B/O NT_023451AL4452201666313163chr6NT_023451AL03337616674268330000
S/G/Y/R/B/O NT_023451AL4452201666313163  AC0274391696502701228670022867
S/G/Y/R/B/O NT_023451AL4452201666313163  AC073982169650270163229184941790106868
S/G/Y/R/B/O NT_023451AL0333761667426833chr6NT_023451AL59040116682111630000
S/G/Y/R/B/O NT_023451AL5904011668211163chr6NT_023451AL357075166825088300100100
S/G/Y/R/B/O NT_023451AL3570751668250883chr6NT_023451AL591419167003449300100100
S/G/Y/R/B/O NT_023451AL3570751668250883  AC0689821668250881488290048829
S/G/Y/R/B/O NT_023451AL5914191670034493chr6NT_023451AL62710816705677230000
S/G/Y/R/B/O NT_023451AL5914191670034493  AC0689821670034491509820233753319
S/G/Y/R/B/O NT_023451AL6271081670567723chr6NT_023451AL59149916708707530000
S/G/Y/R/B/O NT_023451AL6271081670567723  AC06898216682508811383501841032245
S/G/Y/R/B/O NT_023451AL6271081670567723  AL5907071668250881105402744013284
S/G/Y/R/B/O NT_023451AL5914991670870753chr6NT_023451AL13697616719693932000002000
S/G/Y/R/B/O NT_023451AL5914991670870753  AC0689821668250881499240049924
S/G/Y/R/B/O NT_023451AL5914991670870753  AL590707167196939137665122241038760276
S/G/Y/R/B/O NT_023451AL1369761671969393chr6NT_023451AL12195216724995130000
S/G/Y/R/B/O NT_023451AL1219521672499513chr6NT_023451AL136228167357357300100100
S/G/Y/R/B/O NT_023451AL1362281673573573chr6NT_023451AL590284167449717300614614
S/G/Y/R/B/O NT_023451AL5902841674497173chr6NT_023451AL35534316748667930000
S/G/Y/R/B/O NT_023451AL3553431674866793chr6NT_023451AL59620216766394132000002000
S/G/Y/R/B/O NT_023451AL3553431674866793  AC0235671673573571144251183205174167745
S/G/Y/R/B/O NT_023451AL5962021676639413chr6NT_023451AL13910116768822330000
S/G/Y/R/B/O NT_023451AL1391011676882233chr6NT_023451AL031773167802475300100100
S/G/Y/R/B/O NT_023451AL1391011676882233  AL3531731678024751585122616371864846
S/G/Y/R/B/O NT_023451AL1391011676882233  AL3553591678024751676760067676
S/G/Y/R/B/O NT_023451AL0317731678024753chr6NT_023451AL133474167893070300104104
S/G/Y/R/B/O NT_023451AL0317731678024753  AL3553591676882231634970063497
S/G/Y/R/B/O NT_023451AL1334741678930703chr6NT_023451AL59160316799510832000002000
S/G/Y/R/B/O NT_023451AL5916031679951083chr6NT_023451AL51241016803133322000002000
S/G/Y/R/B/O NT_023451AL5124101680313332chr6NT_023451AL51251016819022430199601996
S/G/Y/R/B/O NT_023451AL5124101680313332  AC026098168031333180595431554149139059
S/G/Y/R/B/O NT_023451AL5125101681902243chr6NT_023451AL58386116835919432000002000
S/G/Y/R/B/O NT_023451AL5838611683591943chr6NT_023451AL58969316842955012000002000
S/G/Y/R/B/O NT_023451AL5896931684295501chr6NT_023451AL51245416859275330000
S/G/Y/R/B/O NT_023451AL5896931684295501  AC018421168429550116329100163291
S/G/Y/R/B/O NT_023451AL5124541685927533chr6NT_023451AL513264168692369300100100
S/G/Y/R/B/O NT_023451AL5132641686923693chr6NT_023451AL512658168782284300100100
S/G/Y/R/B/O NT_023451AL5126581687822843chr6NT_023451AL15803316895528732000002000
S/G/Y/R/B/O NT_023451AL5126581687822843  AC0191991687822841110540177637450149766
S/G/Y/R/B/O NT_023451AL5126581687822843  AL51241116895528714319710535491258644
S/G/Y/R/B/O NT_023451AL1580331689552873chr6NT_023451AL35529716905556930000
S/G/Y/R/B/O NT_023451AL1580331689552873  AC0191991686923691483860048386
S/G/Y/R/B/O NT_023451AL1580331689552873  AL512411168692369189354114480100802
S/G/Y/R/B/O NT_023451AL3552971690555693chr6NT_023451AL16257816922468730000
S/G/Y/R/B/O NT_023451AL3552971690555693  AC0587921687822841328931955149636344
S/G/Y/R/B/O NT_023451AL3552971690555693  AL5124111687822841109840010984
S/G/Y/R/B/O NT_023451AL1625781692246873chr6NT_023451AL136091169407410300100100
S/G/Y/R/B/O NT_023451AL1625781692246873  AC0244081687822841129974269510729143398
S/G/Y/R/B/O NT_023451AL1625781692246873  AC058792168782284112062877191174129521
S/G/Y/R/B/O NT_023451AL1360911694074103chr6NT_023451AL04982016942355230000
S/G/Y/R/B/O NT_023451AL0498201694235523chr6NT_023451AL59154516961095932000002000
S/G/Y/R/B/O NT_023451AL5915451696109593chr6NT_023451AC02174516965027010000
S/G/Y/R/B/O NT_023451AC0217451696502701         
S/G/Y/R/B/O NT_023451AC0217451696502701chr6NT_023451AL136094166247098363685395354768185
S/G/Y/R/B/O NT_023451AC0217451696502701chr6NT_023451AL1364441664371013702750070275
S/G/Y/R/B/O NT_023451AC0217451696502701chr6NT_023451AL3598501664036653334750033475
S/G/Y/R/B/O NT_023451AC0217451696502701  AC027439169423552149203020749410