Chromosome 11 - Clone Overlaps - Single Contig
Description of this page
Main Reports Page
Main Assembly Page
Main Overlap Page
Whole Chromosome
Single Contigs
Line color code:
White: overlap with immediately succeeding clone
Green: overlap with clone in same contig
Pink: overlap with clone in same chromosome, different contig
Red: overlap with clone on different chromosome
Yellow: overlap with clone not used in assembly
NT_009407
NT_009308
NT_008953
NT_008937
NT_024164
NT_033238
NT_009368
NT_028310
NT_033239
NT_009325
NT_008957
NT_024194
NT_033233
NT_033231
NT_028309
NT_030795
NT_017854
NT_009062
NT_024163
NT_024275
NT_009038
NT_009306
NT_009307
NT_030792
NT_030801
NT_024200
NT_024283
NT_033235
NT_009182
NT_033242
NT_008952
NT_024172
NT_033236
NT_024189
NT_009237
NT_024229
NT_009020
NT_024192
NT_033915
NT_009296
NT_009178
NT_008978
NT_024343
NT_027118
NT_027110
NT_030109
NT_024169
NT_033902
NT_033903
NT_033913
NT_033994
NT_033237
NT_009405
NT_033232
NT_024160
NT_030106
NT_033241
NT_033923
NT_033926
NT_033900
NT_033929
NT_033930
NT_033925
NT_033924
NT_033928
NT_024149
NT_033927
NT_033243
NT_033240
NT_008984
NT_009151
NT_033244
NT_033899
NT_030800
NT_033901
NT_028309
Links
Contig1
Acc1
Start1
Phs
Chr2
Contig2
Acc2
Start2
Phs
Strong Overlap
Medium Overlap
Weak Overlap
Total Overlap
S
/
G
/
Y
/
R
/
B
/
O
NT_028309
AC111188
8968840
2
chr11
NT_028309
AC027101
8973323
1
100902
2500
1360
104762
S
/
G
/
Y
/
R
/
B
/
O
NT_028309
AC111188
8968840
2
chr11
NT_028309
AC023850
10497428
2
31366
0
0
31366
S
/
G
/
Y
/
R
/
B
/
O
NT_028309
AC111188
8968840
2
chr11
NT_028309
AC084243
10768957
1
35093
0
0
35093
S
/
G
/
Y
/
R
/
B
/
O
NT_028309
AC027101
8973323
1
chr11
NT_028309
AC019126
8974587
1
0
0
0
0
S
/
G
/
Y
/
R
/
B
/
O
NT_028309
AC027101
8973323
1
chr11
NT_028309
AC023850
10497428
2
38641
0
0
38641
S
/
G
/
Y
/
R
/
B
/
O
NT_028309
AC027101
8973323
1
chr11
NT_028309
AC084243
10768957
1
32883
0
0
32883
S
/
G
/
Y
/
R
/
B
/
O
NT_028309
AC019126
8974587
1
chr11
NT_028309
AC011979
9134977
3
32945
0
0
32945
S
/
G
/
Y
/
R
/
B
/
O
NT_028309
AC019126
8974587
1
 
 
AJ277546
9134977
3
80439
0
10049
90488
S
/
G
/
Y
/
R
/
B
/
O
NT_028309
AC019126
8974587
1
 
 
AJ295844
9134977
3
40103
0
66867
106970
S
/
G
/
Y
/
R
/
B
/
O
NT_028309
AC011979
9134977
3
chr11
NT_028309
AC026250
9277988
2
11981
0
0
11981
S
/
G
/
Y
/
R
/
B
/
O
NT_028309
AC011979
9134977
3
chr11
NT_028309
AC025788
9349517
1
20638
0
5195
25833
S
/
G
/
Y
/
R
/
B
/
O
NT_028309
AC011979
9134977
3
 
 
AJ277546
9277988
3
73995
0
0
73995
S
/
G
/
Y
/
R
/
B
/
O
NT_028309
AC026250
9277988
2
chr11
NT_028309
AC025788
9349517
1
122195
6896
9682
138773
S
/
G
/
Y
/
R
/
B
/
O
NT_028309
AC026250
9277988
2
chr11
NT_028309
AC053531
9426295
1
43962
8490
27121
79573
S
/
G
/
Y
/
R
/
B
/
O
NT_028309
AC025788
9349517
1
chr11
NT_028309
AC053531
9426295
1
20707
5337
0
26044
S
/
G
/
Y
/
R
/
B
/
O
NT_028309
AC025788
9349517
1
chr11
NT_028309
AC011979
9134977
3
20638
0
5195
25833
S
/
G
/
Y
/
R
/
B
/
O
NT_028309
AC053531
9426295
1
chr11
NT_028309
AC011092
9432137
1
30633
7807
30679
69119
S
/
G
/
Y
/
R
/
B
/
O
NT_028309
AC053531
9426295
1
chr11
NT_028309
AC026250
9277988
2
43962
8490
27121
79573
S
/
G
/
Y
/
R
/
B
/
O
NT_028309
AC011092
9432137
1
chr11
NT_028309
AC100763
9600090
3
24364
0
0
24364
S
/
G
/
Y
/
R
/
B
/
O
NT_028309
AC100763
9600090
3
chr11
NT_028309
AC015700
9773053
1
106269
0
0
106269
S
/
G
/
Y
/
R
/
B
/
O
NT_028309
AC015700
9773053
1
chr11
NT_028309
AC090556
9844675
1
0
0
14023
14023
S
/
G
/
Y
/
R
/
B
/
O
NT_028309
AC090556
9844675
1
chr11
NT_028309
AC080023
9857519
2
93060
0
1407
94467
S
/
G
/
Y
/
R
/
B
/
O
NT_028309
AC090556
9844675
1
 
 
AC018539
9773053
1
70514
1821
0
72335
S
/
G
/
Y
/
R
/
B
/
O
NT_028309
AC080023
9857519
2
chr11
NT_028309
AC021914
9962060
2
15042
0
0
15042
S
/
G
/
Y
/
R
/
B
/
O
NT_028309
AC080023
9857519
2
 
 
AC018539
9857519
1
82035
4186
7148
93369
S
/
G
/
Y
/
R
/
B
/
O
NT_028309
AC021914
9962060
2
chr11
NT_028309
AC009532
10118567
3
0
0
0
0
S
/
G
/
Y
/
R
/
B
/
O
NT_028309
AC021914
9962060
2
 
 
AC018539
9844675
1
57524
12914
0
70438
S
/
G
/
Y
/
R
/
B
/
O
NT_028309
AC009532
10118567
3
chr11
NT_028309
AC025744
10279158
1
46401
0
815
47216
S
/
G
/
Y
/
R
/
B
/
O
NT_028309
AC025744
10279158
1
chr11
NT_028309
AC069360
10400805
1
7298
0
17558
24856
S
/
G
/
Y
/
R
/
B
/
O
NT_028309
AC069360
10400805
1
chr11
NT_028309
AC023850
10497428
2
54498
0
0
54498
S
/
G
/
Y
/
R
/
B
/
O
NT_028309
AC023850
10497428
2
chr11
NT_028309
AC084243
10768957
1
0
0
0
0
S
/
G
/
Y
/
R
/
B
/
O
NT_028309
AC023850
10497428
2
chr11
NT_028309
AC027101
8973323
1
38641
0
0
38641
S
/
G
/
Y
/
R
/
B
/
O
NT_028309
AC023850
10497428
2
chr11
NT_028309
AC111188
8968840
2
31366
0
0
31366
S
/
G
/
Y
/
R
/
B
/
O
NT_028309
AC084243
10768957
1
chr11
NT_028309
AC023946
10877443
1
10597
0
0
10597
S
/
G
/
Y
/
R
/
B
/
O
NT_028309
AC084243
10768957
1
chr11
NT_028309
AC027101
8973323
1
32883
0
0
32883
S
/
G
/
Y
/
R
/
B
/
O
NT_028309
AC084243
10768957
1
chr11
NT_028309
AC111188
8968840
2
35093
0
0
35093
S
/
G
/
Y
/
R
/
B
/
O
NT_028309
AC023946
10877443
1
chr11
NT_028309
AC104031
10962831
2
101553
0
0
101553
S
/
G
/
Y
/
R
/
B
/
O
NT_028309
AC104031
10962831
2