Home    Genome Browser    BLAT Search    Help
  Chromosome 3 - Clone Overlaps - Single Contig
 
Description of this page Main Reports Page Main Assembly Page Main Overlap Page Whole Chromosome Single Contigs

Line color code:

  • White: overlap with immediately succeeding clone
  • Green: overlap with clone in same contig
  • Pink: overlap with clone in same chromosome, different contig
  • Red: overlap with clone on different chromosome
  • Yellow: overlap with clone not used in assembly
NT_005927 NT_029265 NT_028123 NT_006044 NT_022517 NT_005507 NT_022516 NT_005564
NT_005762 NT_005646 NT_028139 NT_033044 NT_005502 NT_022539 NT_022464 NT_005580
NT_033049 NT_005498 NT_006036 NT_005825 NT_029949 NT_005991 NT_005585 NT_022567
NT_028129 NT_005990 NT_030623 NT_022439 NT_006014 NT_033032 NT_005986 NT_033015
NT_033038 NT_022552 NT_005787 NT_033040 NT_022481 NT_005607 NT_033026 NT_005999
NT_005531 NT_022473 NT_022423 NT_005510 NT_022510 NT_022665 NT_028127 NT_022400
NT_005530 NT_029258 NT_022442 NT_005769 NT_005526 NT_022540 NT_022717 NT_005644
NT_022446 NT_005583 NT_033034 NT_005882 NT_033036 NT_022419 NT_006031 NT_022551
NT_022459 NT_033029 NT_022713 NT_022460 NT_033011 NT_022554 NT_022720 NT_005684
NT_005663 NT_033018 NT_022420 NT_033043 NT_022642 NT_005791 NT_022452 NT_022435
NT_033028 NT_022497 NT_022625 NT_005568 NT_022401 NT_033031 NT_026983 NT_022475
NT_033037 NT_022451 NT_005509 NT_005527 NT_033050 NT_030634 NT_033041 NT_005863
NT_022454 NT_022607 NT_022453 NT_025670 NT_030622 NT_033045 NT_022728 NT_031768
NT_019350 NT_022434 NT_029256 NT_022405 NT_022569 NT_006042 NT_022484 NT_005795
NT_015150 NT_022445 NT_030625 NT_005532 NT_029269 NT_022455 NT_029931 NT_033022
NT_029257 NT_005513 NT_005994 NT_030635 NT_022411 NT_005824 NT_033021 NT_005543
NT_005588 NT_006029 NT_022513 NT_005523 NT_033014 NT_006025 NT_022404 NT_005823
NT_033019 NT_022393 NT_025663 NT_005567 NT_030630 NT_005969 NT_033051 NT_025664
NT_005655 NT_022503 NT_022632 NT_033024 NT_022416 NT_022432 NT_033020 NT_033035
NT_033042 NT_005832 NT_022502 NT_005772 NT_019358 NT_005591 NT_005775 NT_022616
NT_005540 NT_029939 NT_005616 NT_005539 NT_022555 NT_005849 NT_005657 NT_005678
NT_005846 NT_005612 NT_033030 NT_022463 NT_022594 NT_022449 NT_022421 NT_005744
NT_022565 NT_022518 NT_005638 NT_022397 NT_022700 NT_022422 NT_025667 NT_033052
NT_022472 NT_033033 NT_022526 NT_022674 NT_022458 NT_022509 NT_005635 NT_033053
NT_005950 NT_022396 NT_005952 NT_022406 NT_022676 NT_029253 NT_030638 NT_005910
NT_022549 NT_033009 NT_005911 NT_005962 NT_031766 NT_005883 NT_005501 NT_005571
NT_033017 NT_033013 NT_029928 NT_033010 NT_005834 NT_005535 NT_033012 NT_033016
NT_022508


  NT_005513
 
LinksContig1Acc1Start1PhsChr2Contig2Acc2Start2PhsStrong OverlapMedium OverlapWeak OverlapTotal Overlap
S/G/Y/R/B/O NT_005513AC0274541240443061chr3NT_005513AC092914124053040187606396913739105314
S/G/Y/R/B/O NT_005513AC0274541240443061chr3NT_005513AC0720261241643993509564775055731
S/G/Y/R/B/O NT_005513AC0274541240443061  AC0236611238438121706096401077010
S/G/Y/R/B/O NT_005513AC0274541240443061  AC06773312032480819686463740103238
S/G/Y/R/B/O NT_005513AC0274541240443061  AC0677341203248081223982134024532
S/G/Y/R/B/O NT_005513AC0274541240443061  AC0692581203248081164472803445423704
S/G/Y/R/B/O NT_005513AC0274541240443061  AC0694191203248081124084774017182
S/G/Y/R/B/O NT_005513AC0929141240530401chr3NT_005513AC02492612414489618400012219621
S/G/Y/R/B/O NT_005513AC0929141240530401chr3NT_005513AC0720261241643993553350055335
S/G/Y/R/B/O NT_005513AC0929141240530401  AC0236611202294841758860075886
S/G/Y/R/B/O NT_005513AC0929141240530401  AC067733124044306110455700104557
S/G/Y/R/B/O NT_005513AC0929141240530401  AC0677341240443061122502134698121365
S/G/Y/R/B/O NT_005513AC0929141240530401  AC0692581240443061296145395351438523
S/G/Y/R/B/O NT_005513AC0929141240530401  AC0694191240443061155150015515
S/G/Y/R/B/O NT_005513AC0249261241448961chr3NT_005513AC0720261241643993501145512481160437
S/G/Y/R/B/O NT_005513AC0249261241448961chr3NT_005513AC0788571243064953414532658108645197
S/G/Y/R/B/O NT_005513AC0249261241448961chr3NT_005513AC1121321242909551342815516470644503
S/G/Y/R/B/O NT_005513AC0249261241448961  AC023661776361501344915512613746140
S/G/Y/R/B/O NT_005513AC0249261241448961  AC06925812404430612014375122021747872
S/G/Y/R/B/O NT_005513AC0249261241448961  AC0694191240443061236725252480433728
S/G/Y/R/B/O NT_005513AC0720261241643993chr3NT_005513AC11213212429095514009103107371164
S/G/Y/R/B/O NT_005513AC0720261241643993chr3NT_005513AC0274541240443061509564775055731
S/G/Y/R/B/O NT_005513AC0720261241643993chr3NT_005513AC0929141240530401553350055335
S/G/Y/R/B/O NT_005513AC0720261241643993  AC023661104976272113232000132320
S/G/Y/R/B/O NT_005513AC0720261241643993  AC0677331240443061948750240097275
S/G/Y/R/B/O NT_005513AC0720261241643993  AC06773412404430611997249232195246847
S/G/Y/R/B/O NT_005513AC0720261241643993  AC069258124044306165957139941601995970
S/G/Y/R/B/O NT_005513AC0720261241643993  AC0694191240443061865592495408993143
S/G/Y/R/B/O NT_005513AC1121321242909551chr3NT_005513AC07885712430649531886906922488093
S/G/Y/R/B/O NT_005513AC1121321242909551chr3NT_005513AC0249261241448961342815516470644503
S/G/Y/R/B/O NT_005513AC1121321242909551  AC02366112429095513827815181641356209
S/G/Y/R/B/O NT_005513AC1121321242909551  AC06925812404430612098028781653440392
S/G/Y/R/B/O NT_005513AC1121321242909551  AC06941912404430612602649391702847993
S/G/Y/R/B/O NT_005513AC0788571243064953chr3NT_005513AC0682641244790131654711610273169812
S/G/Y/R/B/O NT_005513AC0788571243064953chr3NT_005513AC0249261241448961414532658108645197
S/G/Y/R/B/O NT_005513AC0788571243064953  AC0692581244790131295802240587437694
S/G/Y/R/B/O NT_005513AC0788571243064953  AC06941912447901313012701266942796
S/G/Y/R/B/O NT_005513AC0682641244790131chr3NT_005513AC0272241244802651481974173101253382
S/G/Y/R/B/O NT_005513AC0682641244790131chr3NT_005513AC0788541245172843400590040059
S/G/Y/R/B/O NT_005513AC0272241244802651chr3NT_005513AC078854124517284388365648213270108117
S/G/Y/R/B/O NT_005513AC0272241244802651chr3NT_005513AC0449041246680641199241850021774
S/G/Y/R/B/O NT_005513AC0272241244802651chr3NT_005513AC1124831246631241307301850104833628
S/G/Y/R/B/O NT_005513AC0788541245172843chr3NT_005513AC1124831246631241836450587589520
S/G/Y/R/B/O NT_005513AC0788541245172843chr3NT_005513AC044904124668064111173017946806120330
S/G/Y/R/B/O NT_005513AC0788541245172843chr3NT_005513AC0682641244790131400590040059
S/G/Y/R/B/O NT_005513AC1124831246631241chr3NT_005513AC0449041246680641470825155111153348
S/G/Y/R/B/O NT_005513AC1124831246631241chr3NT_005513AC0272241244802651307301850104833628
S/G/Y/R/B/O NT_005513AC1124831246631241chr3NT_005513AC07984112473095033976201315752919
S/G/Y/R/B/O NT_005513AC0449041246680641chr3NT_005513AC07984112473095031574667542789650396
S/G/Y/R/B/O NT_005513AC0449041246680641chr3NT_005513AC0272241244802651199241850021774
S/G/Y/R/B/O NT_005513AC0449041246680641chr3NT_005513AC078854124517284311173017946806120330
S/G/Y/R/B/O NT_005513AC0798411247309503chr3NT_005513AC0221941248437101628982751308868737
S/G/Y/R/B/O NT_005513AC0798411247309503chr3NT_005513AC06392012486196912894702812657073
S/G/Y/R/B/O NT_005513AC0798411247309503chr3NT_005513AC06923912485491417770701088588592
S/G/Y/R/B/O NT_005513AC0798411247309503chr3NT_005513AC11248312466312413976201315752919
S/G/Y/R/B/O NT_005513AC0798411247309503  AC02165212466312417426802049794765
S/G/Y/R/B/O NT_005513AC0221941248437101chr3NT_005513AC06923912485491418064027571416797564
S/G/Y/R/B/O NT_005513AC0221941248437101chr3NT_005513AC063920124861969178661190921014101584
S/G/Y/R/B/O NT_005513AC0221941248437101  AC02165212466312417211427361266787517
S/G/Y/R/B/O NT_005513AC0221941248437101  AC02490712466312413559101242748018
S/G/Y/R/B/O NT_005513AC0692391248549141chr3NT_005513AC06392012486196915550603487990385
S/G/Y/R/B/O NT_005513AC0692391248549141chr3NT_005513AC07984112473095037770701088588592
S/G/Y/R/B/O NT_005513AC0692391248549141  AC021652124730950198741010883109624
S/G/Y/R/B/O NT_005513AC0692391248549141  AC02490712484371014418201560459786
S/G/Y/R/B/O NT_005513AC0639201248619691         
S/G/Y/R/B/O NT_005513AC0639201248619691chr3NT_005513AC022194124843710178661190921014101584
S/G/Y/R/B/O NT_005513AC0639201248619691chr3NT_005513AC07984112473095032894702812657073
S/G/Y/R/B/O NT_005513AC0639201248619691  AC02165212473095014212004710489224
S/G/Y/R/B/O NT_005513AC0639201248619691  AC02490712484371011274126995418669626