Home    Genome Browser    BLAT Search    Help
  Chromosome 3 - Clone Overlaps - Single Contig
 
Description of this page Main Reports Page Main Assembly Page Main Overlap Page Whole Chromosome Single Contigs

Line color code:

  • White: overlap with immediately succeeding clone
  • Green: overlap with clone in same contig
  • Pink: overlap with clone in same chromosome, different contig
  • Red: overlap with clone on different chromosome
  • Yellow: overlap with clone not used in assembly
NT_005927 NT_029265 NT_028123 NT_006044 NT_022517 NT_005507 NT_022516 NT_005564
NT_005762 NT_005646 NT_028139 NT_033044 NT_005502 NT_022539 NT_022464 NT_005580
NT_033049 NT_005498 NT_006036 NT_005825 NT_029949 NT_005991 NT_005585 NT_022567
NT_028129 NT_005990 NT_030623 NT_022439 NT_006014 NT_033032 NT_005986 NT_033015
NT_033038 NT_022552 NT_005787 NT_033040 NT_022481 NT_005607 NT_033026 NT_005999
NT_005531 NT_022473 NT_022423 NT_005510 NT_022510 NT_022665 NT_028127 NT_022400
NT_005530 NT_029258 NT_022442 NT_005769 NT_005526 NT_022540 NT_022717 NT_005644
NT_022446 NT_005583 NT_033034 NT_005882 NT_033036 NT_022419 NT_006031 NT_022551
NT_022459 NT_033029 NT_022713 NT_022460 NT_033011 NT_022554 NT_022720 NT_005684
NT_005663 NT_033018 NT_022420 NT_033043 NT_022642 NT_005791 NT_022452 NT_022435
NT_033028 NT_022497 NT_022625 NT_005568 NT_022401 NT_033031 NT_026983 NT_022475
NT_033037 NT_022451 NT_005509 NT_005527 NT_033050 NT_030634 NT_033041 NT_005863
NT_022454 NT_022607 NT_022453 NT_025670 NT_030622 NT_033045 NT_022728 NT_031768
NT_019350 NT_022434 NT_029256 NT_022405 NT_022569 NT_006042 NT_022484 NT_005795
NT_015150 NT_022445 NT_030625 NT_005532 NT_029269 NT_022455 NT_029931 NT_033022
NT_029257 NT_005513 NT_005994 NT_030635 NT_022411 NT_005824 NT_033021 NT_005543
NT_005588 NT_006029 NT_022513 NT_005523 NT_033014 NT_006025 NT_022404 NT_005823
NT_033019 NT_022393 NT_025663 NT_005567 NT_030630 NT_005969 NT_033051 NT_025664
NT_005655 NT_022503 NT_022632 NT_033024 NT_022416 NT_022432 NT_033020 NT_033035
NT_033042 NT_005832 NT_022502 NT_005772 NT_019358 NT_005591 NT_005775 NT_022616
NT_005540 NT_029939 NT_005616 NT_005539 NT_022555 NT_005849 NT_005657 NT_005678
NT_005846 NT_005612 NT_033030 NT_022463 NT_022594 NT_022449 NT_022421 NT_005744
NT_022565 NT_022518 NT_005638 NT_022397 NT_022700 NT_022422 NT_025667 NT_033052
NT_022472 NT_033033 NT_022526 NT_022674 NT_022458 NT_022509 NT_005635 NT_033053
NT_005950 NT_022396 NT_005952 NT_022406 NT_022676 NT_029253 NT_030638 NT_005910
NT_022549 NT_033009 NT_005911 NT_005962 NT_031766 NT_005883 NT_005501 NT_005571
NT_033017 NT_033013 NT_029928 NT_033010 NT_005834 NT_005535 NT_033012 NT_033016
NT_022508


  NT_005795
 
LinksContig1Acc1Start1PhsChr2Contig2Acc2Start2PhsStrong OverlapMedium OverlapWeak OverlapTotal Overlap
S/G/Y/R/B/O NT_005795AC0928961163374161chr3NT_005795AC09301011636399611245702249334950
S/G/Y/R/B/O NT_005795AC0928961163374161chr3NT_005795AC023645116444113115899430060162000
S/G/Y/R/B/O NT_005795AC0928961163374161chr3NT_005795AC0239631165986151208010020801
S/G/Y/R/B/O NT_005795AC0928961163374161chr3NT_005795AC0270541163851081233675245473233344
S/G/Y/R/B/O NT_005795AC0928961163374161chr3NT_022393AC09298413890759812296014324506642350
S/G/Y/R/B/O NT_005795AC0930101163639961chr3NT_005795AC027054116385108115441282113553166176
S/G/Y/R/B/O NT_005795AC0930101163639961chr3NT_005795AC02364511644411311608701794434031
S/G/Y/R/B/O NT_005795AC0930101163639961chr3NT_005795AC0689381182461601279372175563135743
S/G/Y/R/B/O NT_005795AC0930101163639961chr3NT_005795AC0841881184878981229224996257130489
S/G/Y/R/B/O NT_005795AC0930101163639961chr3NT_005795AC0905521184532821402950251742812
S/G/Y/R/B/O NT_005795AC0930101163639961  AC07340711824616013504238711954558458
S/G/Y/R/B/O NT_005795AC0270541163851081chr3NT_005795AC0236451164441131230605245473233037
S/G/Y/R/B/O NT_005795AC0270541163851081chr3NT_005795AC0689381182461601122255925125419404
S/G/Y/R/B/O NT_005795AC0270541163851081chr3NT_005795AC0841881184878981178214996566128478
S/G/Y/R/B/O NT_005795AC0270541163851081chr3NT_005795AC0905521184532821458283232106650126
S/G/Y/R/B/O NT_005795AC0270541163851081chr3NT_005795AC0928961163374161233675245473233344
S/G/Y/R/B/O NT_005795AC0270541163851081  AC0734071182461601173033871339424568
S/G/Y/R/B/O NT_005795AC0236451164441131chr3NT_005795AC0239631165986151204640163622100
S/G/Y/R/B/O NT_005795AC0236451164441131chr3NT_005795AC092896116337416115899430060162000
S/G/Y/R/B/O NT_005795AC0236451164441131chr3NT_005795AC09301011636399611608701794434031
S/G/Y/R/B/O NT_005795AC0239631165986151chr3NT_005795AC07920211664774410000
S/G/Y/R/B/O NT_005795AC0239631165986151chr3NT_005795AC0110221182109551420521258043310
S/G/Y/R/B/O NT_005795AC0239631165986151chr3NT_005795AC0799441182249191258762382300131259
S/G/Y/R/B/O NT_005795AC0239631165986151chr3NT_005795AC0928961163374161208010020801
S/G/Y/R/B/O NT_005795AC0792021166477441chr3NT_005795AC06895811671270510000
S/G/Y/R/B/O NT_005795AC0792021166477441chr17NT_010783AC0255155489240311194016891988838719
S/G/Y/R/B/O NT_005795AC0792021166477441chr17NT_010783AC07900549616011249111303161551394940
S/G/Y/R/B/O NT_005795AC0792021166477441chr17NT_010783AC11060249759389232728251891419872115
S/G/Y/R/B/O NT_005795AC0689581167127051chr3NT_005795AC112487116718728110798117040109685
S/G/Y/R/B/O NT_005795AC0689581167127051chr3NT_005795AC0928941167908353696790069679
S/G/Y/R/B/O NT_005795AC0689581167127051  AC024131497593891610410061041
S/G/Y/R/B/O NT_005795AC0689581167127051  AC079211497593891226270022627
S/G/Y/R/B/O NT_005795AC1124871167187281chr3NT_005795AC0928941167908353709330070933
S/G/Y/R/B/O NT_005795AC1124871167187281  AC0241311167187281478091338464853795
S/G/Y/R/B/O NT_005795AC0928941167908353chr3NT_005795AC09269211691868730000
S/G/Y/R/B/O NT_005795AC0928941167908353chr3NT_005795AC0689581167127051696790069679
S/G/Y/R/B/O NT_005795AC0928941167908353  AC024131116790835179230208225868107180
S/G/Y/R/B/O NT_005795AC0928941167908353  AC0792111167127051732290073229
S/G/Y/R/B/O NT_005795AC0926921169186873chr3NT_005795AC04833411697748810000
S/G/Y/R/B/O NT_005795AC0926921169186873  AC0792111166477441606700060670
S/G/Y/R/B/O NT_005795AC0483341169774881chr3NT_005795AC06951611719120132296002296
S/G/Y/R/B/O NT_005795AC0483341169774881  AC024181116647744178256534420066103666
S/G/Y/R/B/O NT_005795AC0483341169774881  AC024709116647744110018216681128102978
S/G/Y/R/B/O NT_005795AC0483341169774881  AC0792111166477441406090105841667
S/G/Y/R/B/O NT_005795AC0695161171912013chr3NT_005795AC09289211719490530000
S/G/Y/R/B/O NT_005795AC0928921171949053chr3NT_005795AC07404411724137232003002003
S/G/Y/R/B/O NT_005795AC0928921171949053  AC0241811169774881341346507632546966
S/G/Y/R/B/O NT_005795AC0740441172413723chr3NT_005795AC07878511743337432000002000
S/G/Y/R/B/O NT_005795AC0740441172413723chr3NT_005795AC024108118120603115603400156034
S/G/Y/R/B/O NT_005795AC0740441172413723  AC0241811181206031162440016244
S/G/Y/R/B/O NT_005795AC0740441172413723  AC026559118120603116042700160427
S/G/Y/R/B/O NT_005795AC0740441172413723  AC092911117194905116386200163862
S/G/Y/R/B/O NT_005795AC0787851174333743chr3NT_005795AC0263291176171091476390047639
S/G/Y/R/B/O NT_005795AC0787851174333743chr3NT_005795AC02165511812876015650747753354794829
S/G/Y/R/B/O NT_005795AC0263291176171091chr3NT_005795AC02634811773372133207003207
S/G/Y/R/B/O NT_005795AC0263291176171091  AC0557061177337211363503732713747219
S/G/Y/R/B/O NT_005795AC0263481177337213chr3NT_005795AC02389411776710012005002005
S/G/Y/R/B/O NT_005795AC0263481177337213  AC0557061176171091142057210021415
S/G/Y/R/B/O NT_005795AC0238941177671001chr3NT_005795AC1121281178346483875410087541
S/G/Y/R/B/O NT_005795AC0238941177671001  AC0216951176171091460862744134750177
S/G/Y/R/B/O NT_005795AC0238941177671001  AC05570611773372111221412243668631143
S/G/Y/R/B/O NT_005795AC1121281178346483chr3NT_005795AC0557401180142523560090056009
S/G/Y/R/B/O NT_005795AC1121281178346483  AC021695117834648114429827448057155099
S/G/Y/R/B/O NT_005795AC0557401180142523chr3NT_005795AC0192471181058531704050343673841
S/G/Y/R/B/O NT_005795AC0557401180142523chr3NT_005795AC10869311811398211533202420839540
S/G/Y/R/B/O NT_005795AC0557401180142523  AC0216951181058531397040039704
S/G/Y/R/B/O NT_005795AC0192471181058531chr3NT_005795AC108693118113982149167054546103713
S/G/Y/R/B/O NT_005795AC0192471181058531chr3NT_005795AC011022118210955144750207495147775
S/G/Y/R/B/O NT_005795AC0192471181058531chr3NT_005795AC0799441182249191141864492545240087
S/G/Y/R/B/O NT_005795AC1086931181139821chr3NT_005795AC02410811812060310000
S/G/Y/R/B/O NT_005795AC1086931181139821chr3NT_005795AC05574011801425231533202420839540
S/G/Y/R/B/O NT_005795AC1086931181139821chr3NT_005795AC07994411822491911374901173425483
S/G/Y/R/B/O NT_005795AC0241081181206031chr3NT_005795AC02165511812876014426155671524065068
S/G/Y/R/B/O NT_005795AC0241081181206031chr3NT_005795AC074044117241372315603400156034
S/G/Y/R/B/O NT_005795AC0241081181206031  AC026559118128760111941600119416
S/G/Y/R/B/O NT_005795AC0241081181206031  AC092911117433374113852900138529
S/G/Y/R/B/O NT_005795AC0216551181287601chr3NT_005795AC01102211821095510000
S/G/Y/R/B/O NT_005795AC0216551181287601chr3NT_005795AC07878511743337435650747753354794829
S/G/Y/R/B/O NT_005795AC0110221182109551chr3NT_005795AC079944118224919192517028017120534
S/G/Y/R/B/O NT_005795AC0110221182109551chr3NT_005795AC019247118105853144750207495147775
S/G/Y/R/B/O NT_005795AC0110221182109551chr3NT_005795AC0239631165986151420521258043310
S/G/Y/R/B/O NT_005795AC0799441182249191chr3NT_005795AC06893811824616010000
S/G/Y/R/B/O NT_005795AC0799441182249191chr3NT_005795AC0192471181058531141864492545240087
S/G/Y/R/B/O NT_005795AC0799441182249191chr3NT_005795AC0239631165986151258762382300131259
S/G/Y/R/B/O NT_005795AC0799441182249191chr3NT_005795AC10869311811398211374901173425483
S/G/Y/R/B/O NT_005795AC0689381182461601chr3NT_005795AC090552118453282173802118161311498732
S/G/Y/R/B/O NT_005795AC0689381182461601chr3NT_005795AC0270541163851081122255925125419404
S/G/Y/R/B/O NT_005795AC0689381182461601chr3NT_005795AC0838861188163581183401580261022530
S/G/Y/R/B/O NT_005795AC0689381182461601chr3NT_005795AC0841881184878981368567465465548976
S/G/Y/R/B/O NT_005795AC0689381182461601chr3NT_005795AC0930101163639961279372175563135743
S/G/Y/R/B/O NT_005795AC0689381182461601  AC07340711638510815069373381279470825
S/G/Y/R/B/O NT_005795AC0905521184532821chr3NT_005795AC084188118487898155752113652523792354
S/G/Y/R/B/O NT_005795AC0905521184532821chr3NT_005795AC0270541163851081458283232106650126
S/G/Y/R/B/O NT_005795AC0905521184532821chr3NT_005795AC08388611881635811942802207041498
S/G/Y/R/B/O NT_005795AC0905521184532821chr3NT_005795AC0930101163639961402950251742812
S/G/Y/R/B/O NT_005795AC0905521184532821  AC073407118246160168326460539433112364
S/G/Y/R/B/O NT_005795AC0841881184878981chr3NT_005795AC02137611854155410000
S/G/Y/R/B/O NT_005795AC0841881184878981chr3NT_005795AC0270541163851081178214996566128478
S/G/Y/R/B/O NT_005795AC0841881184878981chr3NT_005795AC0689381182461601368567465465548976
S/G/Y/R/B/O NT_005795AC0841881184878981chr3NT_005795AC08388611881635813703114872133453237
S/G/Y/R/B/O NT_005795AC0841881184878981chr3NT_005795AC0930101163639961229224996257130489
S/G/Y/R/B/O NT_005795AC0841881184878981  AC07340711824616016005340481353377634
S/G/Y/R/B/O NT_005795AC0213761185415541chr3NT_005795AC046136118551584176048052246128294
S/G/Y/R/B/O NT_005795AC0213761185415541chr3NT_005795AC0690631186758521220440022044
S/G/Y/R/B/O NT_005795AC0461361185515841chr3NT_005795AC0690631186758521270410027041
S/G/Y/R/B/O NT_005795AC0690631186758521chr3NT_005795AC08388611881635810000
S/G/Y/R/B/O NT_005795AC0690631186758521chr3NT_005795AC0213761185415541220440022044
S/G/Y/R/B/O NT_005795AC0690631186758521chr2NT_005034AC069205212912026320787149891849954275
S/G/Y/R/B/O NT_005795AC0690631186758521chr2NT_005034AC079308212903847317686193503350470540
S/G/Y/R/B/O NT_005795AC0690631186758521chr3NT_005795AC0929151193306883111330011133
S/G/Y/R/B/O NT_005795AC0838861188163581chr3NT_005795AC05573911886531037474201817692918
S/G/Y/R/B/O NT_005795AC0838861188163581chr3NT_005795AC0689381182461601183401580261022530
S/G/Y/R/B/O NT_005795AC0838861188163581chr3NT_033021AC06897812959071113665323762194760976
S/G/Y/R/B/O NT_005795AC0838861188163581chr3NT_005795AC08418811848789813703114872133453237
S/G/Y/R/B/O NT_005795AC0838861188163581chr3NT_005795AC09055211845328211942802207041498
S/G/Y/R/B/O NT_005795AC0838861188163581  AC0734071295907111151940148916683
S/G/Y/R/B/O NT_005795AC0557391188653103chr3NT_005795AC07898611900131030197601976
S/G/Y/R/B/O NT_005795AC0557391188653103chr3NT_033021AC068978129590711145307457653319103202
S/G/Y/R/B/O NT_005795AC0789861190013103chr3NT_005795AC06950611916585032004002004
S/G/Y/R/B/O NT_005795AC0789861190013103chr3NT_033021AC06897812959071112630035221064040462
S/G/Y/R/B/O NT_005795AC0695061191658503chr3NT_005795AC02656011929511915191026923984594447
S/G/Y/R/B/O NT_005795AC0695061191658503  AC092900119001310110228600102286
S/G/Y/R/B/O NT_005795AC0265601192951191chr3NT_005795AC0929151193306883556400055640
S/G/Y/R/B/O NT_005795AC0265601192951191  AC0274931190013101350590035059
S/G/Y/R/B/O NT_005795AC0265601192951191  AC0929001191658501973070097307
S/G/Y/R/B/O NT_005795AC0929151193306883         
S/G/Y/R/B/O NT_005795AC0929151193306883chr3NT_005795AC0690631186758521111330011133
S/G/Y/R/B/O NT_005795AC0929151193306883  AC027493119295119115540100155401
S/G/Y/R/B/O NT_005795AC0929151193306883  AC0929001186758521558180055818