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  Chromosome 3 - Clone Overlaps - Single Contig
 
Description of this page Main Reports Page Main Assembly Page Main Overlap Page Whole Chromosome Single Contigs

Line color code:

  • White: overlap with immediately succeeding clone
  • Green: overlap with clone in same contig
  • Pink: overlap with clone in same chromosome, different contig
  • Red: overlap with clone on different chromosome
  • Yellow: overlap with clone not used in assembly
NT_005927 NT_029265 NT_028123 NT_006044 NT_022517 NT_005507 NT_022516 NT_005564
NT_005762 NT_005646 NT_028139 NT_033044 NT_005502 NT_022539 NT_022464 NT_005580
NT_033049 NT_005498 NT_006036 NT_005825 NT_029949 NT_005991 NT_005585 NT_022567
NT_028129 NT_005990 NT_030623 NT_022439 NT_006014 NT_033032 NT_005986 NT_033015
NT_033038 NT_022552 NT_005787 NT_033040 NT_022481 NT_005607 NT_033026 NT_005999
NT_005531 NT_022473 NT_022423 NT_005510 NT_022510 NT_022665 NT_028127 NT_022400
NT_005530 NT_029258 NT_022442 NT_005769 NT_005526 NT_022540 NT_022717 NT_005644
NT_022446 NT_005583 NT_033034 NT_005882 NT_033036 NT_022419 NT_006031 NT_022551
NT_022459 NT_033029 NT_022713 NT_022460 NT_033011 NT_022554 NT_022720 NT_005684
NT_005663 NT_033018 NT_022420 NT_033043 NT_022642 NT_005791 NT_022452 NT_022435
NT_033028 NT_022497 NT_022625 NT_005568 NT_022401 NT_033031 NT_026983 NT_022475
NT_033037 NT_022451 NT_005509 NT_005527 NT_033050 NT_030634 NT_033041 NT_005863
NT_022454 NT_022607 NT_022453 NT_025670 NT_030622 NT_033045 NT_022728 NT_031768
NT_019350 NT_022434 NT_029256 NT_022405 NT_022569 NT_006042 NT_022484 NT_005795
NT_015150 NT_022445 NT_030625 NT_005532 NT_029269 NT_022455 NT_029931 NT_033022
NT_029257 NT_005513 NT_005994 NT_030635 NT_022411 NT_005824 NT_033021 NT_005543
NT_005588 NT_006029 NT_022513 NT_005523 NT_033014 NT_006025 NT_022404 NT_005823
NT_033019 NT_022393 NT_025663 NT_005567 NT_030630 NT_005969 NT_033051 NT_025664
NT_005655 NT_022503 NT_022632 NT_033024 NT_022416 NT_022432 NT_033020 NT_033035
NT_033042 NT_005832 NT_022502 NT_005772 NT_019358 NT_005591 NT_005775 NT_022616
NT_005540 NT_029939 NT_005616 NT_005539 NT_022555 NT_005849 NT_005657 NT_005678
NT_005846 NT_005612 NT_033030 NT_022463 NT_022594 NT_022449 NT_022421 NT_005744
NT_022565 NT_022518 NT_005638 NT_022397 NT_022700 NT_022422 NT_025667 NT_033052
NT_022472 NT_033033 NT_022526 NT_022674 NT_022458 NT_022509 NT_005635 NT_033053
NT_005950 NT_022396 NT_005952 NT_022406 NT_022676 NT_029253 NT_030638 NT_005910
NT_022549 NT_033009 NT_005911 NT_005962 NT_031766 NT_005883 NT_005501 NT_005571
NT_033017 NT_033013 NT_029928 NT_033010 NT_005834 NT_005535 NT_033012 NT_033016
NT_022508


  NT_005962
 
LinksContig1Acc1Start1PhsChr2Contig2Acc2Start2PhsStrong OverlapMedium OverlapWeak OverlapTotal Overlap
S/G/Y/R/B/O NT_005962AC0268351924791391chr3NT_005962AC10978019248617410000
S/G/Y/R/B/O NT_005962AC0268351924791391chr3NT_005962AC00965319379048012585618272227046398
S/G/Y/R/B/O NT_005962AC0268351924791391chr3NT_005962AC01891919361895136137913467074846
S/G/Y/R/B/O NT_005962AC0268351924791391chr3NT_005962AC0682991934323261232191375492429518
S/G/Y/R/B/O NT_005962AC0268351924791391chr3NT_005962AC1046351935076541509595422329059671
S/G/Y/R/B/O NT_005962AC1097801924861741chr3NT_005962AC0098631924884721280920179329885
S/G/Y/R/B/O NT_005962AC1097801924861741chr3NT_005962AC0686311927592993481829659376861609
S/G/Y/R/B/O NT_005962AC1097801924861741chr3NT_005962AC1129071924884781280640214230206
S/G/Y/R/B/O NT_005962AC1097801924861741  AC0169261924884721106837600716025443
S/G/Y/R/B/O NT_005962AC0098631924884721chr3NT_005962AC1129071924884781116649276212599132010
S/G/Y/R/B/O NT_005962AC0098631924884721chr3NT_005962AC012149192538548110822252595479118960
S/G/Y/R/B/O NT_005962AC0098631924884721chr3NT_005962AC026612192538273156903178071098985699
S/G/Y/R/B/O NT_005962AC0098631924884721chr3NT_005962AC072018192673194137138116181096859724
S/G/Y/R/B/O NT_005962AC0098631924884721  AC09298319267319414551973821836771268
S/G/Y/R/B/O NT_005962AC1129071924884781chr3NT_005962AC0266121925382731605641715627377105097
S/G/Y/R/B/O NT_005962AC1129071924884781chr3NT_005962AC012149192538548146747056005102752
S/G/Y/R/B/O NT_005962AC1129071924884781chr3NT_005962AC07201819267319412553870192591158468
S/G/Y/R/B/O NT_005962AC1129071924884781chr3NT_005962AC1097801924861741280640214230206
S/G/Y/R/B/O NT_005962AC1129071924884781  AC09298319267319415766056571459577912
S/G/Y/R/B/O NT_005962AC0266121925382731chr3NT_005962AC012149192538548190395150668541114002
S/G/Y/R/B/O NT_005962AC0266121925382731chr3NT_005962AC0076901929596523217996773143130003
S/G/Y/R/B/O NT_005962AC0266121925382731chr3NT_005962AC009863192488472156903178071098985699
S/G/Y/R/B/O NT_005962AC0266121925382731chr3NT_005962AC0720181926731941232835646028929
S/G/Y/R/B/O NT_005962AC0266121925382731chr3NT_005962AC10463819260715613270714047334450098
S/G/Y/R/B/O NT_005962AC0266121925382731  AC09298319267319415171712386578969892
S/G/Y/R/B/O NT_005962AC0121491925385481chr3NT_005962AC1046381926071561125370012537
S/G/Y/R/B/O NT_005962AC0121491925385481chr3NT_005962AC009863192488472110822252595479118960
S/G/Y/R/B/O NT_005962AC0121491925385481chr3NT_005962AC07201819267319414624447483414285134
S/G/Y/R/B/O NT_005962AC0121491925385481chr3NT_005962AC112907192488478146747056005102752
S/G/Y/R/B/O NT_005962AC0121491925385481  AC092983192673194181193821714462103872
S/G/Y/R/B/O NT_005962AC1046381926071561chr3NT_005962AC06660319261523510000
S/G/Y/R/B/O NT_005962AC1046381926071561chr3NT_005962AC007690192959652388744012645101389
S/G/Y/R/B/O NT_005962AC1046381926071561chr3NT_005962AC02661219253827313270714047334450098
S/G/Y/R/B/O NT_005962AC1046381926071561  AC02621119253854813630294531275458509
S/G/Y/R/B/O NT_005962AC1046381926071561  AC0371961925382731138476033836928249
S/G/Y/R/B/O NT_005962AC1046381926071561  AC06660219253827313630294531275458509
S/G/Y/R/B/O NT_005962AC1046381926071561  AC09298319267319413913410614371553463
S/G/Y/R/B/O NT_005962AC0666031926152351chr3NT_005962AC02249819261771312623513633493562533
S/G/Y/R/B/O NT_005962AC0666031926152351chr3NT_005962AC0260151941505761267041754580834266
S/G/Y/R/B/O NT_005962AC0666031926152351chr3NT_005962AC0929411941687591140902814578222686
S/G/Y/R/B/O NT_005962AC0666031926152351chr3NT_005962AC11247919416878516481117541107877643
S/G/Y/R/B/O NT_005962AC0224981926177131chr3NT_005962AC07201819267319410000
S/G/Y/R/B/O NT_005962AC0224981926177131chr3NT_005962AC0260151941505761251512214108828453
S/G/Y/R/B/O NT_005962AC0224981926177131chr3NT_005962AC0929411941687591251212214108828423
S/G/Y/R/B/O NT_005962AC0224981926177131chr3NT_005962AC1124791941687851258752214108829177
S/G/Y/R/B/O NT_005962AC0720181926731941chr3NT_005962AC06863119275929930000
S/G/Y/R/B/O NT_005962AC0720181926731941chr3NT_005962AC009863192488472137138116181096859724
S/G/Y/R/B/O NT_005962AC0720181926731941chr3NT_005962AC01214919253854814624447483414285134
S/G/Y/R/B/O NT_005962AC0720181926731941chr3NT_005962AC0266121925382731232835646028929
S/G/Y/R/B/O NT_005962AC0720181926731941chr3NT_005962AC11290719248847812553870192591158468
S/G/Y/R/B/O NT_005962AC0720181926731941  AC0929831925382731200218380347831879
S/G/Y/R/B/O NT_005962AC0686311927592993chr3NT_005962AC00769019295965230000
S/G/Y/R/B/O NT_005962AC0686311927592993chr3NT_005962AC1097801924861741481829659376861609
S/G/Y/R/B/O NT_005962AC0686311927592993  AB0386891924884783103090010309
S/G/Y/R/B/O NT_005962AC0686311927592993  AC016926192488478185023426761270150560
S/G/Y/R/B/O NT_005962AC0076901929596523chr3NT_005962AC00748819309676330000
S/G/Y/R/B/O NT_005962AC0076901929596523chr3NT_005962AC0266121925382731217996773143130003
S/G/Y/R/B/O NT_005962AC0076901929596523chr3NT_005962AC104638192607156188744012645101389
S/G/Y/R/B/O NT_005962AC0076901929596523  AC0262111924861741288829455947047807
S/G/Y/R/B/O NT_005962AC0076901929596523  AC03719619253827311381743481580733972
S/G/Y/R/B/O NT_005962AC0076901929596523  AC0666021925382731288829455947047807
S/G/Y/R/B/O NT_005962AC0076901929596523  AC0929831925382731247912477027268
S/G/Y/R/B/O NT_005962AC0074881930967633chr3NT_005962AC06906919324100332000002000
S/G/Y/R/B/O NT_005962AC0074881930967633chr3NT_005962AC03419019350089714129602002861324
S/G/Y/R/B/O NT_005962AC0074881930967633  AC0720191932410031386180259841216
S/G/Y/R/B/O NT_005962AC0690691932410033chr3NT_005962AC00792019326079230000
S/G/Y/R/B/O NT_005962AC0079201932607923chr3NT_005962AC068299193432326184894048767133661
S/G/Y/R/B/O NT_005962AC0079201932607923chr3NT_005962AC034190193500897121888100392651458441
S/G/Y/R/B/O NT_005962AC0079201932607923  AC046154193500897184970474827831117549
S/G/Y/R/B/O NT_005962AC0079201932607923  AC072019193545263115060200150602
S/G/Y/R/B/O NT_005962AC0682991934323261chr3NT_005962AC0341901935008971752383481310728978
S/G/Y/R/B/O NT_005962AC0682991934323261chr3NT_005962AC0268351924791391232191375492429518
S/G/Y/R/B/O NT_005962AC0682991934323261chr3NT_005962AC0683181935452631138757157021032
S/G/Y/R/B/O NT_005962AC0682991934323261chr3NT_005962AC10463519350765411428224671102027769
S/G/Y/R/B/O NT_005962AC0682991934323261  AC04615419350089717222347472081897788
S/G/Y/R/B/O NT_005962AC0341901935008971chr3NT_005962AC10463519350765410000
S/G/Y/R/B/O NT_005962AC0341901935008971chr3NT_005962AC00748819309676334129602002861324
S/G/Y/R/B/O NT_005962AC0341901935008971chr3NT_005962AC007920193260792321888100392651458441
S/G/Y/R/B/O NT_005962AC0341901935008971  AC072019193241003147991110192363882648
S/G/Y/R/B/O NT_005962AC1046351935076541chr3NT_005962AC068318193545263132680703710305
S/G/Y/R/B/O NT_005962AC1046351935076541chr3NT_005962AC0096531937904801232287443897639647
S/G/Y/R/B/O NT_005962AC1046351935076541chr3NT_005962AC0189191936189513542946768568866750
S/G/Y/R/B/O NT_005962AC1046351935076541chr3NT_005962AC0268351924791391509595422329059671
S/G/Y/R/B/O NT_005962AC1046351935076541chr3NT_005962AC06829919343232611428224671102027769
S/G/Y/R/B/O NT_005962AC1046351935076541chr3NT_005962AC08385419378780611451601323127747
S/G/Y/R/B/O NT_005962AC1046351935076541  AC03418419247913911451601323127747
S/G/Y/R/B/O NT_005962AC0683181935452631chr3NT_005962AC01891919361895130000
S/G/Y/R/B/O NT_005962AC0683181935452631chr3NT_005962AC0682991934323261138757157021032
S/G/Y/R/B/O NT_005962AC0189191936189513chr3NT_005962AC0720221937470951464100046410
S/G/Y/R/B/O NT_005962AC0189191936189513chr3NT_005962AC009653193790480115548307723163206
S/G/Y/R/B/O NT_005962AC0189191936189513chr3NT_005962AC02683519247913916137913467074846
S/G/Y/R/B/O NT_005962AC0189191936189513chr3NT_005962AC0341851937899291194522580514227174
S/G/Y/R/B/O NT_005962AC0189191936189513chr3NT_005962AC0838541937878061698871257418732101193
S/G/Y/R/B/O NT_005962AC0189191936189513chr3NT_005962AC1046351935076541542946768568866750
S/G/Y/R/B/O NT_005962AC0189191936189513  AC0341841924791391698871257418732101193
S/G/Y/R/B/O NT_005962AC0720221937470951chr3NT_005962AC0838541937878061248437954032797
S/G/Y/R/B/O NT_005962AC0720221937470951chr3NT_005962AC00965319379048014204501268754732
S/G/Y/R/B/O NT_005962AC0720221937470951chr3NT_005962AC034185193789929133769136823293780388
S/G/Y/R/B/O NT_005962AC0720221937470951chr3NT_005962AC08001019395608212919204141970611
S/G/Y/R/B/O NT_005962AC0720221937470951  AC0341841939613271248907931032821
S/G/Y/R/B/O NT_005962AC0838541937878061chr3NT_005962AC0341851937899291148442846567823368
S/G/Y/R/B/O NT_005962AC0838541937878061chr3NT_005962AC0096531937904801776509792216189603
S/G/Y/R/B/O NT_005962AC0838541937878061chr3NT_005962AC0189191936189513698871257418732101193
S/G/Y/R/B/O NT_005962AC0838541937878061chr3NT_005962AC10463519350765411451601323127747
S/G/Y/R/B/O NT_005962AC0838541937878061  AC0341841924791391106036283850134421
S/G/Y/R/B/O NT_005962AC0341851937899291chr3NT_005962AC0096531937904801194464748715631350
S/G/Y/R/B/O NT_005962AC0341851937899291chr3NT_005962AC0189191936189513194522580514227174
S/G/Y/R/B/O NT_005962AC0341851937899291chr3NT_005962AC072022193747095133769136823293780388
S/G/Y/R/B/O NT_005962AC0341851937899291  AC0341841939613271148442846567823368
S/G/Y/R/B/O NT_005962AC0096531937904801chr3NT_005962AC08001019395608210000
S/G/Y/R/B/O NT_005962AC0096531937904801chr3NT_005962AC018919193618951315548307723163206
S/G/Y/R/B/O NT_005962AC0096531937904801chr3NT_005962AC02683519247913912585618272227046398
S/G/Y/R/B/O NT_005962AC0096531937904801chr3NT_005962AC07202219374709514204501268754732
S/G/Y/R/B/O NT_005962AC0096531937904801chr3NT_005962AC0838541937878061776509792216189603
S/G/Y/R/B/O NT_005962AC0096531937904801chr3NT_005962AC1046351935076541232287443897639647
S/G/Y/R/B/O NT_005962AC0096531937904801  AC0341841924791391776509792216189603
S/G/Y/R/B/O NT_005962AC0800101939560821chr3NT_005962AC02141419396132713861501778556400
S/G/Y/R/B/O NT_005962AC0800101939560821chr3NT_005962AC06829519399068033287702393956816
S/G/Y/R/B/O NT_005962AC0800101939560821chr3NT_005962AC07202219374709512919204141970611
S/G/Y/R/B/O NT_005962AC0214141939613271chr3NT_005962AC1086811939613333192720019272
S/G/Y/R/B/O NT_005962AC0214141939613271chr3NT_005962AC068295193990680311137201543112915
S/G/Y/R/B/O NT_005962AC0214141939613271  AC01641019396133314572653811070561812
S/G/Y/R/B/O NT_005962AC1086811939613333chr3NT_005962AC06829519399068030000
S/G/Y/R/B/O NT_005962AC0682951939906803chr3NT_005962AC02601519415057618958008958
S/G/Y/R/B/O NT_005962AC0682951939906803chr3NT_005962AC021414193961327111137201543112915
S/G/Y/R/B/O NT_005962AC0682951939906803chr3NT_005962AC08001019395608213287702393956816
S/G/Y/R/B/O NT_005962AC0682951939906803  AC0164101939560821108232464820217133097
S/G/Y/R/B/O NT_005962AC0260151941505761chr3NT_005962AC092941194168759110254206063108605
S/G/Y/R/B/O NT_005962AC0260151941505761chr3NT_005962AC0224981926177131251512214108828453
S/G/Y/R/B/O NT_005962AC0260151941505761chr3NT_005962AC0666031926152351267041754580834266
S/G/Y/R/B/O NT_005962AC0260151941505761chr3NT_005962AC112479194168785114549715344973152004
S/G/Y/R/B/O NT_005962AC0929411941687591chr3NT_005962AC1124791941687851101835031752133587
S/G/Y/R/B/O NT_005962AC0929411941687591chr3NT_005962AC0224981926177131251212214108828423
S/G/Y/R/B/O NT_005962AC0929411941687591chr3NT_005962AC0666031926152351140902814578222686
S/G/Y/R/B/O NT_005962AC1124791941687851         
S/G/Y/R/B/O NT_005962AC1124791941687851chr3NT_005962AC0224981926177131258752214108829177
S/G/Y/R/B/O NT_005962AC1124791941687851chr3NT_005962AC026015194150576114549715344973152004
S/G/Y/R/B/O NT_005962AC1124791941687851chr3NT_005962AC06660319261523516481117541107877643