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  Chromosome 3 - Clone Overlaps - Single Contig
 
Description of this page Main Reports Page Main Assembly Page Main Overlap Page Whole Chromosome Single Contigs

Line color code:

  • White: overlap with immediately succeeding clone
  • Green: overlap with clone in same contig
  • Pink: overlap with clone in same chromosome, different contig
  • Red: overlap with clone on different chromosome
  • Yellow: overlap with clone not used in assembly
NT_005927 NT_029265 NT_028123 NT_006044 NT_022517 NT_005507 NT_022516 NT_005564
NT_005762 NT_005646 NT_028139 NT_033044 NT_005502 NT_022539 NT_022464 NT_005580
NT_033049 NT_005498 NT_006036 NT_005825 NT_029949 NT_005991 NT_005585 NT_022567
NT_028129 NT_005990 NT_030623 NT_022439 NT_006014 NT_033032 NT_005986 NT_033015
NT_033038 NT_022552 NT_005787 NT_033040 NT_022481 NT_005607 NT_033026 NT_005999
NT_005531 NT_022473 NT_022423 NT_005510 NT_022510 NT_022665 NT_028127 NT_022400
NT_005530 NT_029258 NT_022442 NT_005769 NT_005526 NT_022540 NT_022717 NT_005644
NT_022446 NT_005583 NT_033034 NT_005882 NT_033036 NT_022419 NT_006031 NT_022551
NT_022459 NT_033029 NT_022713 NT_022460 NT_033011 NT_022554 NT_022720 NT_005684
NT_005663 NT_033018 NT_022420 NT_033043 NT_022642 NT_005791 NT_022452 NT_022435
NT_033028 NT_022497 NT_022625 NT_005568 NT_022401 NT_033031 NT_026983 NT_022475
NT_033037 NT_022451 NT_005509 NT_005527 NT_033050 NT_030634 NT_033041 NT_005863
NT_022454 NT_022607 NT_022453 NT_025670 NT_030622 NT_033045 NT_022728 NT_031768
NT_019350 NT_022434 NT_029256 NT_022405 NT_022569 NT_006042 NT_022484 NT_005795
NT_015150 NT_022445 NT_030625 NT_005532 NT_029269 NT_022455 NT_029931 NT_033022
NT_029257 NT_005513 NT_005994 NT_030635 NT_022411 NT_005824 NT_033021 NT_005543
NT_005588 NT_006029 NT_022513 NT_005523 NT_033014 NT_006025 NT_022404 NT_005823
NT_033019 NT_022393 NT_025663 NT_005567 NT_030630 NT_005969 NT_033051 NT_025664
NT_005655 NT_022503 NT_022632 NT_033024 NT_022416 NT_022432 NT_033020 NT_033035
NT_033042 NT_005832 NT_022502 NT_005772 NT_019358 NT_005591 NT_005775 NT_022616
NT_005540 NT_029939 NT_005616 NT_005539 NT_022555 NT_005849 NT_005657 NT_005678
NT_005846 NT_005612 NT_033030 NT_022463 NT_022594 NT_022449 NT_022421 NT_005744
NT_022565 NT_022518 NT_005638 NT_022397 NT_022700 NT_022422 NT_025667 NT_033052
NT_022472 NT_033033 NT_022526 NT_022674 NT_022458 NT_022509 NT_005635 NT_033053
NT_005950 NT_022396 NT_005952 NT_022406 NT_022676 NT_029253 NT_030638 NT_005910
NT_022549 NT_033009 NT_005911 NT_005962 NT_031766 NT_005883 NT_005501 NT_005571
NT_033017 NT_033013 NT_029928 NT_033010 NT_005834 NT_005535 NT_033012 NT_033016
NT_022508


  NT_005527
 
LinksContig1Acc1Start1PhsChr2Contig2Acc2Start2PhsStrong OverlapMedium OverlapWeak OverlapTotal Overlap
S/G/Y/R/B/O NT_005527AC0259421011893281chr3NT_005527AC1087301012800931324810368336164
S/G/Y/R/B/O NT_005527AC1087301012800931chr3NT_005527AC0742741013766103242300503029260
S/G/Y/R/B/O NT_005527AC1087301012800931chr3NT_005527AC0216601014211403185330174220275
S/G/Y/R/B/O NT_005527AC0742741013766103chr3NT_005527AC02166010142114030000
S/G/Y/R/B/O NT_005527AC0216601014211403chr3NT_005527AC1087371015837011124942540015034
S/G/Y/R/B/O NT_005527AC0216601014211403chr3NT_005527AC1087301012800931185330174220275
S/G/Y/R/B/O NT_005527AC1087371015837011chr3NT_005527AC016962101592114193918450810289108715
S/G/Y/R/B/O NT_005527AC1087371015837011chr3NT_005527AC0134971025898001481374502383156470
S/G/Y/R/B/O NT_005527AC1087371015837011chr3NT_005527AC0263031021734311245590024559
S/G/Y/R/B/O NT_005527AC1087371015837011chr3NT_005527AC1067281021329571439834308818956480
S/G/Y/R/B/O NT_005527AC0169621015921141chr3NT_005527AC02616310164091210000
S/G/Y/R/B/O NT_005527AC0169621015921141chr3NT_005527AC013497102589800181138033483114621
S/G/Y/R/B/O NT_005527AC0169621015921141chr3NT_005527AC0263031021734311661590066159
S/G/Y/R/B/O NT_005527AC0169621015921141chr3NT_005527AC106728102132957182035018193100228
S/G/Y/R/B/O NT_005527AC0261631016409121chr3NT_005527AC02347710167253915641001755473964
S/G/Y/R/B/O NT_005527AC0261631016409121chr15NT_024654AC0157987581011221501941813671755917
S/G/Y/R/B/O NT_005527AC0261631016409121chr3NT_005527AC0665911016986851624290921271641
S/G/Y/R/B/O NT_005527AC0261631016409121chr15NT_024654AC090751759753783792030827187474
S/G/Y/R/B/O NT_005527AC0261631016409121  AC01181210158370129749818951047100440
S/G/Y/R/B/O NT_005527AC0261631016409121  AC087844101859325394572418139631138384
S/G/Y/R/B/O NT_005527AC0261631016409121  AC090182101859325194249608422456122789
S/G/Y/R/B/O NT_005527AC0261631016409121  AC0904731018593251739481899636882215
S/G/Y/R/B/O NT_005527AC0261631016409121  AC0905401018593251868771888104989814
S/G/Y/R/B/O NT_005527AC0234771016725391chr3NT_005527AC0665911016986851137399492024718167037
S/G/Y/R/B/O NT_005527AC0234771016725391chr3NT_005527AC0240591017351701104030010403
S/G/Y/R/B/O NT_005527AC0234771016725391chr3NT_005527AC06952710185932515188438361788473604
S/G/Y/R/B/O NT_005527AC0234771016725391chr15NT_024654AC090179761832663175790017579
S/G/Y/R/B/O NT_005527AC0234771016725391chr15NT_024654AC090751759753783137687023925161612
S/G/Y/R/B/O NT_005527AC0234771016725391  AC011812759753782103971021727125698
S/G/Y/R/B/O NT_005527AC0234771016725391  AC08784410185932536306303018893251
S/G/Y/R/B/O NT_005527AC0234771016725391  AC09018276183266179090030135109225
S/G/Y/R/B/O NT_005527AC0234771016725391  AC090473761832661118819023919142738
S/G/Y/R/B/O NT_005527AC0234771016725391  AC0905407618326617311026792163497423
S/G/Y/R/B/O NT_005527AC0665911016986851chr3NT_005527AC0240581017142101139070013907
S/G/Y/R/B/O NT_005527AC0665911016986851chr3NT_005527AC0240591017351701104030010403
S/G/Y/R/B/O NT_005527AC0665911016986851chr3NT_005527AC0261631016409121624290921271641
S/G/Y/R/B/O NT_005527AC0665911016986851chr3NT_005527AC06952710185932515185217341788371469
S/G/Y/R/B/O NT_005527AC0665911016986851chr15NT_024654AC090179761832663108630489015753
S/G/Y/R/B/O NT_005527AC0665911016986851chr15NT_024654AC090751759753783120425015586136011
S/G/Y/R/B/O NT_005527AC0665911016986851  AC01181275975378293511010680104191
S/G/Y/R/B/O NT_005527AC0665911016986851  AC0878441018593253593260921668542
S/G/Y/R/B/O NT_005527AC0665911016986851  AC0901827618326617483701069585532
S/G/Y/R/B/O NT_005527AC0665911016986851  AC09047376183266196882011885108767
S/G/Y/R/B/O NT_005527AC0665911016986851  AC0905407618326615112026791554069339
S/G/Y/R/B/O NT_005527AC0240581017142101chr3NT_005527AC0220031017247681201170202322140
S/G/Y/R/B/O NT_005527AC0240581017142101chr3NT_005527AC0240591017351701101124385696321460
S/G/Y/R/B/O NT_005527AC0240581017142101chr15NT_024654AC0272437618912512436265901497145923
S/G/Y/R/B/O NT_005527AC0240581017142101chr15NT_024654AC090179761832663526368723447765836
S/G/Y/R/B/O NT_005527AC0240581017142101chr15NT_024654AC0902687631877611779944241710439327
S/G/Y/R/B/O NT_005527AC0240581017142101chr15NT_024654AC090751759753783282722138030410
S/G/Y/R/B/O NT_005527AC0240581017142101  AC011812759753782177422007019749
S/G/Y/R/B/O NT_005527AC0240581017142101  AC090473763187761178030017803
S/G/Y/R/B/O NT_005527AC0240581017142101  AC090540763187761223324145026477
S/G/Y/R/B/O NT_005527AC0220031017247681chr3NT_005527AC0240591017351701308071949210434860
S/G/Y/R/B/O NT_005527AC0220031017247681chr15NT_024654AC0272437618912514090720991109754103
S/G/Y/R/B/O NT_005527AC0220031017247681chr15NT_024654AC06832276336493124207121971938455788
S/G/Y/R/B/O NT_005527AC0220031017247681chr15NT_024654AC0901797618326637758420991876798450
S/G/Y/R/B/O NT_005527AC0220031017247681chr15NT_024654AC0902687631877613073220991108043911
S/G/Y/R/B/O NT_005527AC0220031017247681chr15NT_024654AC0907517597537833645501223648691
S/G/Y/R/B/O NT_005527AC0220031017247681  AC011812759753782166390016639
S/G/Y/R/B/O NT_005527AC0220031017247681  AC090473763187761238180023818
S/G/Y/R/B/O NT_005527AC0240591017351701chr3NT_005527AC06952710185932516458006458
S/G/Y/R/B/O NT_005527AC0240591017351701chr3NT_005527AC0234771016725391104030010403
S/G/Y/R/B/O NT_005527AC0240591017351701chr3NT_005527AC0240581017142101101124385696321460
S/G/Y/R/B/O NT_005527AC0240591017351701chr15NT_024654AC0272437618912513860648731783661315
S/G/Y/R/B/O NT_005527AC0240591017351701chr3NT_005527AC0665911016986851104030010403
S/G/Y/R/B/O NT_005527AC0240591017351701chr15NT_024654AC0683227633649312194313044888443871
S/G/Y/R/B/O NT_005527AC0240591017351701chr15NT_024654AC0901797618326635780501260170406
S/G/Y/R/B/O NT_005527AC0240591017351701chr15NT_024654AC0902687631877613855502267861233
S/G/Y/R/B/O NT_005527AC0240591017351701chr15NT_024654AC090751759753783194760019476
S/G/Y/R/B/O NT_005527AC0240591017351701  AC090540763187761194590019459
S/G/Y/R/B/O NT_005527AC0695271018593251chr3NT_005527AC10672810213295710000
S/G/Y/R/B/O NT_005527AC0695271018593251chr3NT_005527AC02347710167253915188438361788473604
S/G/Y/R/B/O NT_005527AC0695271018593251chr3NT_005527AC06659110169868515185217341788371469
S/G/Y/R/B/O NT_005527AC0695271018593251chr15NT_024654AC090179761832663227374884027621
S/G/Y/R/B/O NT_005527AC0695271018593251chr15NT_024654AC09075175975378367880488449161121925
S/G/Y/R/B/O NT_005527AC0695271018593251  AC0118127597537825373004365097380
S/G/Y/R/B/O NT_005527AC0695271018593251  AC08784410169868531823703199950236
S/G/Y/R/B/O NT_005527AC0695271018593251  AC0901827618326612599517344494272671
S/G/Y/R/B/O NT_005527AC0695271018593251  AC09047376183266160313661039699106622
S/G/Y/R/B/O NT_005527AC0695271018593251  AC09054076183266159148487738373102398
S/G/Y/R/B/O NT_005527AC1067281021329571chr3NT_005527AC0912131021360211111672475531118953
S/G/Y/R/B/O NT_005527AC1067281021329571chr3NT_005527AC013497102589800158327247452771113572
S/G/Y/R/B/O NT_005527AC1067281021329571chr3NT_005527AC016962101592114182035018193100228
S/G/Y/R/B/O NT_005527AC1067281021329571chr3NT_005527AC02630310217343113020942203483669265
S/G/Y/R/B/O NT_005527AC1067281021329571chr3NT_005527AC1087371015837011439834308818956480
S/G/Y/R/B/O NT_005527AC0912131021360211chr3NT_005527AC0263031021734311549110321458125
S/G/Y/R/B/O NT_005527AC0912131021360211chr3NT_005527AC0228381021864311258560336229218
S/G/Y/R/B/O NT_005527AC0912131021360211chr3NT_005527AC0912121022277753288980028898
S/G/Y/R/B/O NT_005527AC0912131021360211chr3NT_005527AC10670410220161612877803730066078
S/G/Y/R/B/O NT_005527AC0263031021734311chr3NT_005527AC0228381021864311130730013073
S/G/Y/R/B/O NT_005527AC0263031021734311chr3NT_005527AC0134971025898001766810700583686
S/G/Y/R/B/O NT_005527AC0263031021734311chr3NT_005527AC0169621015921141661590066159
S/G/Y/R/B/O NT_005527AC0263031021734311chr3NT_005527AC1067041022016161125640012564
S/G/Y/R/B/O NT_005527AC0263031021734311chr3NT_005527AC10672810213295713020942203483669265
S/G/Y/R/B/O NT_005527AC0263031021734311chr3NT_005527AC1087371015837011245590024559
S/G/Y/R/B/O NT_005527AC0228381021864311chr3NT_005527AC106704102201616110817422206203116597
S/G/Y/R/B/O NT_005527AC0228381021864311chr3NT_005527AC0730931023285571245200862933149
S/G/Y/R/B/O NT_005527AC0228381021864311chr3NT_005527AC0912121022277753587070129259999
S/G/Y/R/B/O NT_005527AC0228381021864311chr3NT_005527AC0912131021360211258560336229218
S/G/Y/R/B/O NT_005527AC1067041022016161chr3NT_005527AC0912121022277753786270078627
S/G/Y/R/B/O NT_005527AC1067041022016161chr3NT_005527AC0263031021734311125640012564
S/G/Y/R/B/O NT_005527AC1067041022016161chr3NT_005527AC0730931023285571147140014714
S/G/Y/R/B/O NT_005527AC1067041022016161chr3NT_005527AC09121310213602112877803730066078
S/G/Y/R/B/O NT_005527AC1067041022016161chr3NT_005527AC1086781023496861181317113025244
S/G/Y/R/B/O NT_005527AC0912121022277753chr3NT_005527AC0730931023285571146230014623
S/G/Y/R/B/O NT_005527AC0912121022277753chr3NT_005527AC0228381021864311587070129259999
S/G/Y/R/B/O NT_005527AC0912121022277753chr3NT_005527AC0912131021360211288980028898
S/G/Y/R/B/O NT_005527AC0912121022277753chr3NT_005527AC1086781023496861180212393465825072
S/G/Y/R/B/O NT_005527AC0730931023285571chr3NT_005527AC108678102349686110748351927921120596
S/G/Y/R/B/O NT_005527AC0730931023285571chr3NT_005527AC0228381021864311245200862933149
S/G/Y/R/B/O NT_005527AC0730931023285571chr3NT_005527AC069411102406419313930023427921149563
S/G/Y/R/B/O NT_005527AC0730931023285571chr3NT_005527AC0921811025100223691742340790079414
S/G/Y/R/B/O NT_005527AC0730931023285571chr3NT_005527AC1067041022016161147140014714
S/G/Y/R/B/O NT_005527AC0730931023285571  AC0686391021864311119542349014303
S/G/Y/R/B/O NT_005527AC1086781023496861chr3NT_005527AC0694111024064193108803043675152478
S/G/Y/R/B/O NT_005527AC1086781023496861chr3NT_005527AC0912121022277753180212393465825072
S/G/Y/R/B/O NT_005527AC1086781023496861chr3NT_005527AC0921811025100223247890024789
S/G/Y/R/B/O NT_005527AC1086781023496861chr3NT_005527AC1067041022016161181317113025244
S/G/Y/R/B/O NT_005527AC1086781023496861  AC0686391021864311169132350019263
S/G/Y/R/B/O NT_005527AC0694111024064193chr3NT_005527AC092181102510022310079300100793
S/G/Y/R/B/O NT_005527AC0694111024064193chr3NT_005527AC073093102328557113930023427921149563
S/G/Y/R/B/O NT_005527AC0694111024064193  AC0686391021864311404532350042803
S/G/Y/R/B/O NT_005527AC0921811025100223chr3NT_005527AC01349710258980010000
S/G/Y/R/B/O NT_005527AC0921811025100223chr3NT_005527AC0730931023285571691742340790079414
S/G/Y/R/B/O NT_005527AC0921811025100223chr3NT_033050AC09115610325614013156724142977663757
S/G/Y/R/B/O NT_005527AC0921811025100223chr3NT_005527AC1086781023496861247890024789
S/G/Y/R/B/O NT_005527AC0921811025100223  AC068639103321045182545950832036124089
S/G/Y/R/B/O NT_005527AC0134971025898001         
S/G/Y/R/B/O NT_005527AC0134971025898001chr3NT_005527AC016962101592114181138033483114621
S/G/Y/R/B/O NT_005527AC0134971025898001chr3NT_005527AC0263031021734311766810700583686
S/G/Y/R/B/O NT_005527AC0134971025898001chr3NT_005527AC106728102132957158327247452771113572
S/G/Y/R/B/O NT_005527AC0134971025898001chr3NT_005527AC1087371015837011481374502383156470