Home    Genome Browser    BLAT Search    Help
  Chromosome 3 - Clone Overlaps - Single Contig
 
Description of this page Main Reports Page Main Assembly Page Main Overlap Page Whole Chromosome Single Contigs

Line color code:

  • White: overlap with immediately succeeding clone
  • Green: overlap with clone in same contig
  • Pink: overlap with clone in same chromosome, different contig
  • Red: overlap with clone on different chromosome
  • Yellow: overlap with clone not used in assembly
NT_005927 NT_029265 NT_028123 NT_006044 NT_022517 NT_005507 NT_022516 NT_005564
NT_005762 NT_005646 NT_028139 NT_033044 NT_005502 NT_022539 NT_022464 NT_005580
NT_033049 NT_005498 NT_006036 NT_005825 NT_029949 NT_005991 NT_005585 NT_022567
NT_028129 NT_005990 NT_030623 NT_022439 NT_006014 NT_033032 NT_005986 NT_033015
NT_033038 NT_022552 NT_005787 NT_033040 NT_022481 NT_005607 NT_033026 NT_005999
NT_005531 NT_022473 NT_022423 NT_005510 NT_022510 NT_022665 NT_028127 NT_022400
NT_005530 NT_029258 NT_022442 NT_005769 NT_005526 NT_022540 NT_022717 NT_005644
NT_022446 NT_005583 NT_033034 NT_005882 NT_033036 NT_022419 NT_006031 NT_022551
NT_022459 NT_033029 NT_022713 NT_022460 NT_033011 NT_022554 NT_022720 NT_005684
NT_005663 NT_033018 NT_022420 NT_033043 NT_022642 NT_005791 NT_022452 NT_022435
NT_033028 NT_022497 NT_022625 NT_005568 NT_022401 NT_033031 NT_026983 NT_022475
NT_033037 NT_022451 NT_005509 NT_005527 NT_033050 NT_030634 NT_033041 NT_005863
NT_022454 NT_022607 NT_022453 NT_025670 NT_030622 NT_033045 NT_022728 NT_031768
NT_019350 NT_022434 NT_029256 NT_022405 NT_022569 NT_006042 NT_022484 NT_005795
NT_015150 NT_022445 NT_030625 NT_005532 NT_029269 NT_022455 NT_029931 NT_033022
NT_029257 NT_005513 NT_005994 NT_030635 NT_022411 NT_005824 NT_033021 NT_005543
NT_005588 NT_006029 NT_022513 NT_005523 NT_033014 NT_006025 NT_022404 NT_005823
NT_033019 NT_022393 NT_025663 NT_005567 NT_030630 NT_005969 NT_033051 NT_025664
NT_005655 NT_022503 NT_022632 NT_033024 NT_022416 NT_022432 NT_033020 NT_033035
NT_033042 NT_005832 NT_022502 NT_005772 NT_019358 NT_005591 NT_005775 NT_022616
NT_005540 NT_029939 NT_005616 NT_005539 NT_022555 NT_005849 NT_005657 NT_005678
NT_005846 NT_005612 NT_033030 NT_022463 NT_022594 NT_022449 NT_022421 NT_005744
NT_022565 NT_022518 NT_005638 NT_022397 NT_022700 NT_022422 NT_025667 NT_033052
NT_022472 NT_033033 NT_022526 NT_022674 NT_022458 NT_022509 NT_005635 NT_033053
NT_005950 NT_022396 NT_005952 NT_022406 NT_022676 NT_029253 NT_030638 NT_005910
NT_022549 NT_033009 NT_005911 NT_005962 NT_031766 NT_005883 NT_005501 NT_005571
NT_033017 NT_033013 NT_029928 NT_033010 NT_005834 NT_005535 NT_033012 NT_033016
NT_022508


  NT_005823
 
LinksContig1Acc1Start1PhsChr2Contig2Acc2Start2PhsStrong OverlapMedium OverlapWeak OverlapTotal Overlap
S/G/Y/R/B/O NT_005823AC0341601356822751chr3NT_005823AC093006135694022113629119242174647299
S/G/Y/R/B/O NT_005823AC0341601356822751chr3NT_005823AC0234381357224141143616556523226149
S/G/Y/R/B/O NT_005823AC0341601356822751chr3NT_005823AC0258941359352571368304416639947645
S/G/Y/R/B/O NT_005823AC0930061356940221chr3NT_005823AC02343813572241411465782921087733826
S/G/Y/R/B/O NT_005823AC0234381357224141chr3NT_005823AC0693471358463111275170027517
S/G/Y/R/B/O NT_005823AC0234381357224141chr3NT_005823AC0341601356822751143616556523226149
S/G/Y/R/B/O NT_005823AC0693471358463111chr3NT_005823AC097105135863614121337071522052
S/G/Y/R/B/O NT_005823AC0971051358636141chr3NT_005823AC0690921358910621589648112106968145
S/G/Y/R/B/O NT_005823AC0971051358636141chr3NT_005823AC0557331360660813523360052336
S/G/Y/R/B/O NT_005823AC0971051358636141chr3NT_005823AL1365041360517043663750066375
S/G/Y/R/B/O NT_005823AC0690921358910621chr3NT_005823AC02589413593525710000
S/G/Y/R/B/O NT_005823AC0690921358910621chr3NT_005823AC055733136066081384302856712903105772
S/G/Y/R/B/O NT_005823AC0690921358910621chr3NT_005823AL1365041360517043996231080012905123328
S/G/Y/R/B/O NT_005823AC0690921358910621  AC0251481360517041181012214020315
S/G/Y/R/B/O NT_005823AC0258941359352571chr3NT_005823AL13650413605170430000
S/G/Y/R/B/O NT_005823AC0258941359352571chr3NT_005823AC0341601356822751368304416639947645
S/G/Y/R/B/O NT_005823AC0258941359352571chr3NT_005823AC0930041364926053383120130239614
S/G/Y/R/B/O NT_005823AC0258941359352571  AC0190611360517041189340018934
S/G/Y/R/B/O NT_005823AL1365041360517043chr3NT_005823AC055733136066081317048100170481
S/G/Y/R/B/O NT_005823AL1365041360517043chr3NT_005823AC0690921358910621996231080012905123328
S/G/Y/R/B/O NT_005823AL1365041360517043chr3NT_005823AC0971051358636141663750066375
S/G/Y/R/B/O NT_005823AL1365041360517043  AC0251481356940221624061827064233
S/G/Y/R/B/O NT_005823AC0557331360660813chr3NT_005823AC11642413625749530000
S/G/Y/R/B/O NT_005823AC0557331360660813chr3NT_005823AC069092135891062184302856712903105772
S/G/Y/R/B/O NT_005823AC0557331360660813chr3NT_005823AC0971051358636141523360052336
S/G/Y/R/B/O NT_005823AC0557331360660813  AC0251481358636141812501827083077
S/G/Y/R/B/O NT_005823AC1164241362574953chr3NT_005823AC0648391363178931210340021034
S/G/Y/R/B/O NT_005823AC1164241362574953  AC02514813605170414649601310959605
S/G/Y/R/B/O NT_005823AC0648391363178931chr3NT_005823AC083908136376339112171300121713
S/G/Y/R/B/O NT_005823AC0648391363178931chr3NT_005823AC0102101367316923124760012476
S/G/Y/R/B/O NT_005823AC0648391363178931  AC025148342974151178180017818
S/G/Y/R/B/O NT_005823AC0839081363763391chr3NT_005823AC09300413649260530000
S/G/Y/R/B/O NT_005823AC0839081363763391chr3NT_005823AC0102101367316923734340073434
S/G/Y/R/B/O NT_005823AC0839081363763391chr3NT_005823AC10873213681108111315598981881641869
S/G/Y/R/B/O NT_005823AC0930041364926053chr3NT_005823AC1126461366517391685160068516
S/G/Y/R/B/O NT_005823AC0930041364926053chr3NT_005823AC0258941359352571383120130239614
S/G/Y/R/B/O NT_005823AC0930041364926053  AC019061136811081115476301466156229
S/G/Y/R/B/O NT_005823AC1126461366517391chr3NT_005823AC01021013673169230000
S/G/Y/R/B/O NT_005823AC1126461366517391  AC01609513665173915501761041812079241
S/G/Y/R/B/O NT_005823AC1126461366517391  AC0190611366517391666350146468099
S/G/Y/R/B/O NT_005823AC1126461366517391  AC0229451366517391219062438134725691
S/G/Y/R/B/O NT_005823AC1126461366517391  AC10870713649260511389904521559114
S/G/Y/R/B/O NT_005823AC0102101367316923chr3NT_005823AC108732136811081157297145582658098435
S/G/Y/R/B/O NT_005823AC0102101367316923chr3NT_005823AC0648391363178931124760012476
S/G/Y/R/B/O NT_005823AC0102101367316923chr3NT_005823AC0839081363763391734340073434
S/G/Y/R/B/O NT_005823AC1087321368110811chr3NT_005823AC02690613681348010000
S/G/Y/R/B/O NT_005823AC1087321368110811chr3NT_005823AC0237571368792641139412889221619046
S/G/Y/R/B/O NT_005823AC1087321368110811chr3NT_005823AC08390813637633911315598981881641869
S/G/Y/R/B/O NT_005823AC1087321368110811chr3NT_005823AC1070271368784651182654985221625466
S/G/Y/R/B/O NT_005823AC0269061368134801chr3NT_005823AC10702713687846511643730931449434024
S/G/Y/R/B/O NT_005823AC0269061368134801chr3NT_005823AC0237571368792641412040041204
S/G/Y/R/B/O NT_005823AC1070271368784651chr3NT_005823AC023757136879264112326884317692139391
S/G/Y/R/B/O NT_005823AC1070271368784651chr3NT_005823AC1087321368110811182654985221625466
S/G/Y/R/B/O NT_005823AC0237571368792641         
S/G/Y/R/B/O NT_005823AC0237571368792641chr3NT_005823AC0269061368134801412040041204
S/G/Y/R/B/O NT_005823AC0237571368792641chr3NT_005823AC1087321368110811139412889221619046