Home    Genome Browser    BLAT Search    Help
  Chromosome 3 - Clone Overlaps - Single Contig
 
Description of this page Main Reports Page Main Assembly Page Main Overlap Page Whole Chromosome Single Contigs

Line color code:

  • White: overlap with immediately succeeding clone
  • Green: overlap with clone in same contig
  • Pink: overlap with clone in same chromosome, different contig
  • Red: overlap with clone on different chromosome
  • Yellow: overlap with clone not used in assembly
NT_005927 NT_029265 NT_028123 NT_006044 NT_022517 NT_005507 NT_022516 NT_005564
NT_005762 NT_005646 NT_028139 NT_033044 NT_005502 NT_022539 NT_022464 NT_005580
NT_033049 NT_005498 NT_006036 NT_005825 NT_029949 NT_005991 NT_005585 NT_022567
NT_028129 NT_005990 NT_030623 NT_022439 NT_006014 NT_033032 NT_005986 NT_033015
NT_033038 NT_022552 NT_005787 NT_033040 NT_022481 NT_005607 NT_033026 NT_005999
NT_005531 NT_022473 NT_022423 NT_005510 NT_022510 NT_022665 NT_028127 NT_022400
NT_005530 NT_029258 NT_022442 NT_005769 NT_005526 NT_022540 NT_022717 NT_005644
NT_022446 NT_005583 NT_033034 NT_005882 NT_033036 NT_022419 NT_006031 NT_022551
NT_022459 NT_033029 NT_022713 NT_022460 NT_033011 NT_022554 NT_022720 NT_005684
NT_005663 NT_033018 NT_022420 NT_033043 NT_022642 NT_005791 NT_022452 NT_022435
NT_033028 NT_022497 NT_022625 NT_005568 NT_022401 NT_033031 NT_026983 NT_022475
NT_033037 NT_022451 NT_005509 NT_005527 NT_033050 NT_030634 NT_033041 NT_005863
NT_022454 NT_022607 NT_022453 NT_025670 NT_030622 NT_033045 NT_022728 NT_031768
NT_019350 NT_022434 NT_029256 NT_022405 NT_022569 NT_006042 NT_022484 NT_005795
NT_015150 NT_022445 NT_030625 NT_005532 NT_029269 NT_022455 NT_029931 NT_033022
NT_029257 NT_005513 NT_005994 NT_030635 NT_022411 NT_005824 NT_033021 NT_005543
NT_005588 NT_006029 NT_022513 NT_005523 NT_033014 NT_006025 NT_022404 NT_005823
NT_033019 NT_022393 NT_025663 NT_005567 NT_030630 NT_005969 NT_033051 NT_025664
NT_005655 NT_022503 NT_022632 NT_033024 NT_022416 NT_022432 NT_033020 NT_033035
NT_033042 NT_005832 NT_022502 NT_005772 NT_019358 NT_005591 NT_005775 NT_022616
NT_005540 NT_029939 NT_005616 NT_005539 NT_022555 NT_005849 NT_005657 NT_005678
NT_005846 NT_005612 NT_033030 NT_022463 NT_022594 NT_022449 NT_022421 NT_005744
NT_022565 NT_022518 NT_005638 NT_022397 NT_022700 NT_022422 NT_025667 NT_033052
NT_022472 NT_033033 NT_022526 NT_022674 NT_022458 NT_022509 NT_005635 NT_033053
NT_005950 NT_022396 NT_005952 NT_022406 NT_022676 NT_029253 NT_030638 NT_005910
NT_022549 NT_033009 NT_005911 NT_005962 NT_031766 NT_005883 NT_005501 NT_005571
NT_033017 NT_033013 NT_029928 NT_033010 NT_005834 NT_005535 NT_033012 NT_033016
NT_022508


  NT_005787
 
LinksContig1Acc1Start1PhsChr2Contig2Acc2Start2PhsStrong OverlapMedium OverlapWeak OverlapTotal Overlap
S/G/Y/R/B/O NT_005787AC068753550279971chr3NT_005787AC09205755063820311143549383554119927
S/G/Y/R/B/O NT_005787AC092057550638203chr3NT_005787AC079032552273551912129833232544429
S/G/Y/R/B/O NT_005787AC092057550638203chr3NT_005787AC109584552782731241610024161
S/G/Y/R/B/O NT_005787AC079032552273551chr3NT_005787AC1095845527827312934327386409096171
S/G/Y/R/B/O NT_005787AC079032552273551chr3NT_005787AC0927975528425433697627384067680390
S/G/Y/R/B/O NT_005787AC109584552782731chr3NT_005787AC0927975528425431204160924121340
S/G/Y/R/B/O NT_005787AC109584552782731chr3NT_005787AC092057550638203241610024161
S/G/Y/R/B/O NT_005787AC092797552842543chr3NT_005787AC104298554845323657340065734
S/G/Y/R/B/O NT_005787AC092797552842543chr3NT_005787AC0790325522735513697627384067680390
S/G/Y/R/B/O NT_005787AC092797552842543  AC093417552273551256320025632
S/G/Y/R/B/O NT_005787AC104298554845323chr3NT_005787AC092059555941141580850058085
S/G/Y/R/B/O NT_005787AC104298554845323  AC018594552782731672812670069951
S/G/Y/R/B/O NT_005787AC104298554845323  AC0212521447678031573362430059766
S/G/Y/R/B/O NT_005787AC104298554845323  AC093417552842541739911899147177361
S/G/Y/R/B/O NT_005787AC092059555941141chr3NT_005787AC016306557097731124400012440
S/G/Y/R/B/O NT_005787AC092059555941141chr3NT_005787AC027002557214411618480792869776
S/G/Y/R/B/O NT_005787AC092059555941141  AC01859455709773110329826790105977
S/G/Y/R/B/O NT_005787AC092059555941141  AC021252144767803110794325970110540
S/G/Y/R/B/O NT_005787AC016306557097731chr3NT_005787AC0270025572144118162311010092633
S/G/Y/R/B/O NT_005787AC016306557097731chr3NT_005787AC016323557266691723511593206276006
S/G/Y/R/B/O NT_005787AC016306557097731chr3NT_005787AC068773558466041371630037163
S/G/Y/R/B/O NT_005787AC016306557097731chr3NT_005787AC107298558814871142050014205
S/G/Y/R/B/O NT_005787AC027002557214411chr3NT_005787AC01632355726669150324436845555147
S/G/Y/R/B/O NT_005787AC027002557214411chr3NT_005787AC092059555941141618480792869776
S/G/Y/R/B/O NT_005787AC027002557214411  AC018594557266691277550027755
S/G/Y/R/B/O NT_005787AC016323557266691chr3NT_005787AC06877355846604169710499506075269
S/G/Y/R/B/O NT_005787AC016323557266691chr3NT_005787AC011106558872231291122439733838889
S/G/Y/R/B/O NT_005787AC016323557266691chr3NT_005787AC016306557097731723511593206276006
S/G/Y/R/B/O NT_005787AC016323557266691chr3NT_005787AC1072985588148712227237481179637816
S/G/Y/R/B/O NT_005787AC068773558466041chr3NT_005787AC10729855881487187829233415708105871
S/G/Y/R/B/O NT_005787AC068773558466041chr3NT_005787AC01110655887223193144219610360105700
S/G/Y/R/B/O NT_005787AC068773558466041chr3NT_005787AC016306557097731371630037163
S/G/Y/R/B/O NT_005787AC068773558466041chr3NT_005787AC0263265601588015657556071078172963
S/G/Y/R/B/O NT_005787AC107298558814871chr3NT_005787AC0111065588722315786225102497585347
S/G/Y/R/B/O NT_005787AC107298558814871chr3NT_005787AC016306557097731142050014205
S/G/Y/R/B/O NT_005787AC107298558814871chr3NT_005787AC0163235572666912227237481179637816
S/G/Y/R/B/O NT_005787AC107298558814871chr3NT_005787AC026326560158801645441037987975460
S/G/Y/R/B/O NT_005787AC011106558872231chr3NT_005787AC026326560158801480494582052631
S/G/Y/R/B/O NT_005787AC011106558872231chr3NT_005787AC016323557266691291122439733838889
S/G/Y/R/B/O NT_005787AC011106558872231chr3NT_005787AC06877355846604193144219610360105700
S/G/Y/R/B/O NT_005787AC011106558872231chr3NT_005787AC078978560240091110850388414969
S/G/Y/R/B/O NT_005787AC026326560158801chr3NT_005787AC0789785602400917141841161859594129
S/G/Y/R/B/O NT_005787AC026326560158801chr3NT_005787AC0255725610907831343126971424530373
S/G/Y/R/B/O NT_005787AC026326560158801chr3NT_005787AC0687735584660415657556071078172963
S/G/Y/R/B/O NT_005787AC026326560158801chr3NT_005787AC107298558814871645441037987975460
S/G/Y/R/B/O NT_005787AC078978560240091chr3NT_005787AC0255725610907835847803228690764
S/G/Y/R/B/O NT_005787AC078978560240091chr3NT_005787AC011106558872231110850388414969
S/G/Y/R/B/O NT_005787AC078978560240091  AC0970145584660436408302672890811
S/G/Y/R/B/O NT_005787AC025572561090783chr3NT_005787AC0796245631058810000
S/G/Y/R/B/O NT_005787AC025572561090783chr3NT_005787AC0263265601588011343126971424530373
S/G/Y/R/B/O NT_005787AC025572561090783  AC09701456024009314340100143401
S/G/Y/R/B/O NT_005787AC079624563105881chr3NT_005787AC06925456316086124082272041227214
S/G/Y/R/B/O NT_005787AC079624563105881chr3NT_005787AC098479571086663362700998046250
S/G/Y/R/B/O NT_005787AC079624563105881chr3NT_005787AC110008571086631277240998037704
S/G/Y/R/B/O NT_005787AC079624563105881chr3NT_005787AC114399571077241258352720733035885
S/G/Y/R/B/O NT_005787AC069254563160861chr3NT_005787AC0939285632211210000
S/G/Y/R/B/O NT_005787AC069254563160861chr3NT_005787AC0997775690397613861323322613167076
S/G/Y/R/B/O NT_005787AC069254563160861chr3NT_005787AC1143995710772415426967931885679918
S/G/Y/R/B/O NT_005787AC093928563221121chr3NT_005787AC0677595633424810000
S/G/Y/R/B/O NT_005787AC093928563221121chr3NT_005787AC069438563876351466600046660
S/G/Y/R/B/O NT_005787AC093928563221121chr3NT_005787AC097358587533491226760022676
S/G/Y/R/B/O NT_005787AC067759563342481chr3NT_005787AC0694385638763510000
S/G/Y/R/B/O NT_005787AC067759563342481chr3NT_005787AC098478580011021813343912247387719
S/G/Y/R/B/O NT_005787AC067759563342481chr3NT_005787AC099775578022873343723709205140132
S/G/Y/R/B/O NT_005787AC067759563342481chr3NT_005787AC105753579837303441253709205149885
S/G/Y/R/B/O NT_005787AC069438563876351chr3NT_005787AC092418565224361145410143415975
S/G/Y/R/B/O NT_005787AC069438563876351chr3NT_005787AC093928563221121466600046660
S/G/Y/R/B/O NT_005787AC092418565224361chr3NT_005787AC1080405658362411504907218687235
S/G/Y/R/B/O NT_005787AC092418565224361chr3NT_005787AC114480566338521109550010955
S/G/Y/R/B/O NT_005787AC108040565836241chr3NT_005787AC114480566338521236180699730615
S/G/Y/R/B/O NT_005787AC114480566338521chr3NT_005787AC09955856698225194192389017343115425
S/G/Y/R/B/O NT_005787AC114480566338521chr3NT_005787AC092418565224361109550010955
S/G/Y/R/B/O NT_005787AC099558566982251chr3NT_005787AC099777569039761603291553061882
S/G/Y/R/B/O NT_005787AC099777569039761chr3NT_005787AC114399571077241487960048796
S/G/Y/R/B/O NT_005787AC099777569039761chr3NT_005787AC0692545631608613861323322613167076
S/G/Y/R/B/O NT_005787AC114399571077241chr3NT_005787AC1100085710866310000
S/G/Y/R/B/O NT_005787AC114399571077241chr3NT_005787AC0692545631608615426967931885679918
S/G/Y/R/B/O NT_005787AC114399571077241chr3NT_005787AC079624563105881258352720733035885
S/G/Y/R/B/O NT_005787AC110008571086631chr3NT_005787AC09847957108666315726407681164945
S/G/Y/R/B/O NT_005787AC110008571086631chr3NT_005787AC079624563105881277240998037704
S/G/Y/R/B/O NT_005787AC098479571086663chr3NT_005787AC1043025745523230000
S/G/Y/R/B/O NT_005787AC098479571086663chr3NT_005787AC079624563105881362700998046250
S/G/Y/R/B/O NT_005787AC104302574552323chr3NT_005787AC105748576621043308660030866
S/G/Y/R/B/O NT_005787AC105748576621043chr3NT_005787AC023558577934941764154588081003
S/G/Y/R/B/O NT_005787AC023558577934941chr3NT_005787AC099775578022873796466796550091942
S/G/Y/R/B/O NT_005787AC023558577934941chr3NT_005787AC105753579837303469624096051058
S/G/Y/R/B/O NT_005787AC099775578022873chr3NT_005787AC10575357983730314235400142354
S/G/Y/R/B/O NT_005787AC099775578022873chr3NT_005787AC067759563342481343723709205140132
S/G/Y/R/B/O NT_005787AC105753579837303chr3NT_005787AC0984785800110210000
S/G/Y/R/B/O NT_005787AC105753579837303chr3NT_005787AC023558577934941469624096051058
S/G/Y/R/B/O NT_005787AC105753579837303chr3NT_005787AC067759563342481441253709205149885
S/G/Y/R/B/O NT_005787AC098478580011021chr3NT_005787AC099781582129891190440019044
S/G/Y/R/B/O NT_005787AC098478580011021chr3NT_005787AC067759563342481813343912247387719
S/G/Y/R/B/O NT_005787AC099781582129891chr3NT_005787AC0995595839322835410005410
S/G/Y/R/B/O NT_005787AC099559583932283chr3NT_005787AC099327585559801781230253880661
S/G/Y/R/B/O NT_005787AC099327585559801chr3NT_005787AC092050585908623624212083064504
S/G/Y/R/B/O NT_005787AC092050585908623chr3NT_005787AC097358587533491106606016166122772
S/G/Y/R/B/O NT_005787AC097358587533491         
S/G/Y/R/B/O NT_005787AC097358587533491chr3NT_005787AC093928563221121226760022676