Home    Genome Browser    BLAT Search    Help
  Chromosome 3 - Clone Overlaps - Single Contig
 
Description of this page Main Reports Page Main Assembly Page Main Overlap Page Whole Chromosome Single Contigs

Line color code:

  • White: overlap with immediately succeeding clone
  • Green: overlap with clone in same contig
  • Pink: overlap with clone in same chromosome, different contig
  • Red: overlap with clone on different chromosome
  • Yellow: overlap with clone not used in assembly
NT_005927 NT_029265 NT_028123 NT_006044 NT_022517 NT_005507 NT_022516 NT_005564
NT_005762 NT_005646 NT_028139 NT_033044 NT_005502 NT_022539 NT_022464 NT_005580
NT_033049 NT_005498 NT_006036 NT_005825 NT_029949 NT_005991 NT_005585 NT_022567
NT_028129 NT_005990 NT_030623 NT_022439 NT_006014 NT_033032 NT_005986 NT_033015
NT_033038 NT_022552 NT_005787 NT_033040 NT_022481 NT_005607 NT_033026 NT_005999
NT_005531 NT_022473 NT_022423 NT_005510 NT_022510 NT_022665 NT_028127 NT_022400
NT_005530 NT_029258 NT_022442 NT_005769 NT_005526 NT_022540 NT_022717 NT_005644
NT_022446 NT_005583 NT_033034 NT_005882 NT_033036 NT_022419 NT_006031 NT_022551
NT_022459 NT_033029 NT_022713 NT_022460 NT_033011 NT_022554 NT_022720 NT_005684
NT_005663 NT_033018 NT_022420 NT_033043 NT_022642 NT_005791 NT_022452 NT_022435
NT_033028 NT_022497 NT_022625 NT_005568 NT_022401 NT_033031 NT_026983 NT_022475
NT_033037 NT_022451 NT_005509 NT_005527 NT_033050 NT_030634 NT_033041 NT_005863
NT_022454 NT_022607 NT_022453 NT_025670 NT_030622 NT_033045 NT_022728 NT_031768
NT_019350 NT_022434 NT_029256 NT_022405 NT_022569 NT_006042 NT_022484 NT_005795
NT_015150 NT_022445 NT_030625 NT_005532 NT_029269 NT_022455 NT_029931 NT_033022
NT_029257 NT_005513 NT_005994 NT_030635 NT_022411 NT_005824 NT_033021 NT_005543
NT_005588 NT_006029 NT_022513 NT_005523 NT_033014 NT_006025 NT_022404 NT_005823
NT_033019 NT_022393 NT_025663 NT_005567 NT_030630 NT_005969 NT_033051 NT_025664
NT_005655 NT_022503 NT_022632 NT_033024 NT_022416 NT_022432 NT_033020 NT_033035
NT_033042 NT_005832 NT_022502 NT_005772 NT_019358 NT_005591 NT_005775 NT_022616
NT_005540 NT_029939 NT_005616 NT_005539 NT_022555 NT_005849 NT_005657 NT_005678
NT_005846 NT_005612 NT_033030 NT_022463 NT_022594 NT_022449 NT_022421 NT_005744
NT_022565 NT_022518 NT_005638 NT_022397 NT_022700 NT_022422 NT_025667 NT_033052
NT_022472 NT_033033 NT_022526 NT_022674 NT_022458 NT_022509 NT_005635 NT_033053
NT_005950 NT_022396 NT_005952 NT_022406 NT_022676 NT_029253 NT_030638 NT_005910
NT_022549 NT_033009 NT_005911 NT_005962 NT_031766 NT_005883 NT_005501 NT_005571
NT_033017 NT_033013 NT_029928 NT_033010 NT_005834 NT_005535 NT_033012 NT_033016
NT_022508


  NT_005678
 
LinksContig1Acc1Start1PhsChr2Contig2Acc2Start2PhsStrong OverlapMedium OverlapWeak OverlapTotal Overlap
S/G/Y/R/B/O NT_005678AC0245371593756021chr3NT_005678AC02718815937811210000
S/G/Y/R/B/O NT_005678AC0245371593756021chr3NT_005678AC0681611595873361257501407326030417
S/G/Y/R/B/O NT_005678AC0245371593756021chr3NT_005678AC069509159436504192696597826523125197
S/G/Y/R/B/O NT_005678AC0245371593756021chr3NT_005678AC1074231594037163228500693829788
S/G/Y/R/B/O NT_005678AC0271881593781121chr3NT_005678AC0929981593883281864548143094597
S/G/Y/R/B/O NT_005678AC0271881593781121chr3NT_005678AC0681611595873361434270043427
S/G/Y/R/B/O NT_005678AC0271881593781121chr3NT_005678AC0689851597765323270960027096
S/G/Y/R/B/O NT_005678AC0271881593781121chr3NT_005678AC07315615964539039364457941373100811
S/G/Y/R/B/O NT_005678AC0929981593883281chr3NT_005678AC07203415939848910000
S/G/Y/R/B/O NT_005678AC0929981593883281chr3NT_005678AC0681611595873361345290034529
S/G/Y/R/B/O NT_005678AC0929981593883281chr3NT_005678AC0689851597765323269870026987
S/G/Y/R/B/O NT_005678AC0929981593883281chr3NT_005678AC073156159645390372673050000122673
S/G/Y/R/B/O NT_005678AC0720341593984891chr3NT_005678AC10742315940371630000
S/G/Y/R/B/O NT_005678AC0720341593984891chr3NT_005678AC0123411601030711722440706979313
S/G/Y/R/B/O NT_005678AC0720341593984891chr3NT_005678AC0184521599982013468622671440553938
S/G/Y/R/B/O NT_005678AC0720341593984891chr3NT_005678AC0410121601445891684762671260173748
S/G/Y/R/B/O NT_005678AC0720341593984891chr3NT_005678AC0647951602521731165463107124520898
S/G/Y/R/B/O NT_005678AC0720341593984891chr3NT_005678AC0929461602521791386680038668
S/G/Y/R/B/O NT_005678AC1074231594037163chr3NT_005678AC06950915943650410000
S/G/Y/R/B/O NT_005678AC1074231594037163chr3NT_005678AC0245371593756021228500693829788
S/G/Y/R/B/O NT_005678AC0695091594365041chr3NT_005678AC0681611595873361717974507530981613
S/G/Y/R/B/O NT_005678AC0695091594365041chr3NT_005678AC024537159375602192696597826523125197
S/G/Y/R/B/O NT_005678AC0681611595873361chr3NT_005678AC06824015962633810000
S/G/Y/R/B/O NT_005678AC0681611595873361chr3NT_005678AC0245371593756021257501407326030417
S/G/Y/R/B/O NT_005678AC0681611595873361chr3NT_005678AC0271881593781121434270043427
S/G/Y/R/B/O NT_005678AC0681611595873361chr3NT_005678AC0929981593883281345290034529
S/G/Y/R/B/O NT_005678AC0682401596263381chr3NT_005678AC07315615964539030000
S/G/Y/R/B/O NT_005678AC0682401596263381chr3NT_005678AC0123411601030711357932295038088
S/G/Y/R/B/O NT_005678AC0682401596263381chr3NT_005678AC0184521599982013707944993125077037
S/G/Y/R/B/O NT_005678AC0682401596263381chr3NT_005678AC0739081599547573421760042176
S/G/Y/R/B/O NT_005678AC0731561596453903chr3NT_005678AC06898515977653230199501995
S/G/Y/R/B/O NT_005678AC0731561596453903chr3NT_005678AC02718815937811219364457941373100811
S/G/Y/R/B/O NT_005678AC0731561596453903chr3NT_005678AC092998159388328172673050000122673
S/G/Y/R/B/O NT_005678AC0689851597765323chr3NT_005678AC07390815995475730000
S/G/Y/R/B/O NT_005678AC0689851597765323chr3NT_005678AC0271881593781121270960027096
S/G/Y/R/B/O NT_005678AC0689851597765323chr3NT_005678AC0929981593883281269870026987
S/G/Y/R/B/O NT_005678AC0739081599547573chr3NT_005678AC01845215999820130000
S/G/Y/R/B/O NT_005678AC0739081599547573chr3NT_005678AC0682401596263381421760042176
S/G/Y/R/B/O NT_005678AC0184521599982013chr3NT_005678AC01234116010307116950416982361194813
S/G/Y/R/B/O NT_005678AC0184521599982013chr3NT_005678AC0410121601445891251100025110
S/G/Y/R/B/O NT_005678AC0184521599982013chr3NT_005678AC0682401596263381707944993125077037
S/G/Y/R/B/O NT_005678AC0184521599982013chr3NT_005678AC0720341593984891468622671440553938
S/G/Y/R/B/O NT_005678AC0123411601030711chr3NT_005678AC0410121601445891653270153366860
S/G/Y/R/B/O NT_005678AC0123411601030711chr3NT_005678AC0682401596263381357932295038088
S/G/Y/R/B/O NT_005678AC0123411601030711chr3NT_005678AC0720341593984891722440706979313
S/G/Y/R/B/O NT_005678AC0410121601445891chr3NT_005678AC0647951602521731260230124627269
S/G/Y/R/B/O NT_005678AC0410121601445891chr3NT_005678AC0184521599982013251100025110
S/G/Y/R/B/O NT_005678AC0410121601445891chr3NT_005678AC0720341593984891684762671260173748
S/G/Y/R/B/O NT_005678AC0410121601445891chr3NT_005678AC0929461602521791661860110567291
S/G/Y/R/B/O NT_005678AC0410121601445891chr3NT_005678AC1104171602960841185870018587
S/G/Y/R/B/O NT_005678AC0647951602521731chr3NT_005678AC092946160252179111915555092227126891
S/G/Y/R/B/O NT_005678AC0647951602521731chr3NT_005678AC0720341593984891165463107124520898
S/G/Y/R/B/O NT_005678AC0647951602521731chr3NT_005678AC092994160420916323914098724901
S/G/Y/R/B/O NT_005678AC0647951602521731chr3NT_005678AC110417160296084190445238498793816
S/G/Y/R/B/O NT_005678AC0929461602521791chr3NT_005678AC110417160296084110597900105979
S/G/Y/R/B/O NT_005678AC0929461602521791chr3NT_005678AC0410121601445891661860110567291
S/G/Y/R/B/O NT_005678AC0929461602521791chr3NT_005678AC0685211605251281161732019143819630
S/G/Y/R/B/O NT_005678AC0929461602521791chr3NT_005678AC0720341593984891386680038668
S/G/Y/R/B/O NT_005678AC0929461602521791chr3NT_005678AC0929941604209163363850036385
S/G/Y/R/B/O NT_005678AC1104171602960841chr3NT_005678AC092994160420916355229075816131045
S/G/Y/R/B/O NT_005678AC1104171602960841chr3NT_005678AC0410121601445891185870018587
S/G/Y/R/B/O NT_005678AC1104171602960841chr3NT_005678AC064795160252173190445238498793816
S/G/Y/R/B/O NT_005678AC1104171602960841chr3NT_005678AC06852116052512815511863271855079995
S/G/Y/R/B/O NT_005678AC0929941604209163chr3NT_005678AC06852116052512811194951176321260152518
S/G/Y/R/B/O NT_005678AC0929941604209163chr3NT_005678AC064795160252173123914098724901
S/G/Y/R/B/O NT_005678AC0929941604209163chr3NT_005678AC0929461602521791363850036385
S/G/Y/R/B/O NT_005678AC0685211605251281         
S/G/Y/R/B/O NT_005678AC0685211605251281chr3NT_005678AC0929461602521791161732019143819630
S/G/Y/R/B/O NT_005678AC0685211605251281chr3NT_005678AC11041716029608415511863271855079995