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  Chromosome 9 - Clone Overlaps - Single Contig
 
Description of this page Main Reports Page Main Assembly Page Main Overlap Page Whole Chromosome Single Contigs

Line color code:

  • White: overlap with immediately succeeding clone
  • Green: overlap with clone in same contig
  • Pink: overlap with clone in same chromosome, different contig
  • Red: overlap with clone on different chromosome
  • Yellow: overlap with clone not used in assembly
NT_033218 NT_008413 NT_027081 NT_023974 NT_030040 NT_033214 NT_030759 NT_030753
NT_033213 NT_033210 NT_008389 NT_033219 NT_033217 NT_029359 NT_033209 NT_033206
NT_033208 NT_033212 NT_033205 NT_033203 NT_031832 NT_033211 NT_033207 NT_008580
NT_023935 NT_028278 NT_023975 NT_023946 NT_023932 NT_024010 NT_033202 NT_008476
NT_033216 NT_008470 NT_008438 NT_017568 NT_029366 NT_008338 NT_031835 NT_017539
NT_008554 NT_023969 NT_030058 NT_019501 NT_033215 NT_024000 NT_023929 NT_023989


  NT_008413
 
LinksContig1Acc1Start1PhsChr2Contig2Acc2Start2PhsStrong OverlapMedium OverlapWeak OverlapTotal Overlap
S/G/Y/R/B/O NT_008413AL5919683210603chr9NT_008413AL15883239500732000002000
S/G/Y/R/B/O NT_008413AL5919683210603chr9NT_033218AL3562441450033716040071604
S/G/Y/R/B/O NT_008413AL5919683210603chr9NT_033218AL44904313505880050588
S/G/Y/R/B/O NT_008413AL1588323950073chr9NT_008413AL161725560538300100100
S/G/Y/R/B/O NT_008413AL1588323950073chr9NT_033218AL356244145003310374300103743
S/G/Y/R/B/O NT_008413AL1617255605383chr9NT_008413AL392089741617300100100
S/G/Y/R/B/O NT_008413AL1617255605383  AC025306321060193440206015075110575
S/G/Y/R/B/O NT_008413AL3920897416173chr9NT_008413AL136979819548300100100
S/G/Y/R/B/O NT_008413AL3920897416173  AC0253067416171566124129119861939
S/G/Y/R/B/O NT_008413AL1369798195483chr9NT_008413AL1363651016547300100100
S/G/Y/R/B/O NT_008413AL13636510165473chr9NT_008413AL3589761195453300100100
S/G/Y/R/B/O NT_008413AL35897611954533chr9NT_008413AL591474130545132000002000
S/G/Y/R/B/O NT_008413AL59147413054513chr9NT_008413AL356498132742332000002000
S/G/Y/R/B/O NT_008413AL35649813274233chr9NT_008413AL3589341445990300100100
S/G/Y/R/B/O NT_008413AL35893414459903chr9NT_008413AL353696154181230000
S/G/Y/R/B/O NT_008413AL35369615418123chr9NT_008413AL35805317234291696770069677
S/G/Y/R/B/O NT_008413AL35805317234291chr9NT_008413AC022053175709210000
S/G/Y/R/B/O NT_008413AL35805317234291chr9NT_008413AL35628417685793667230066723
S/G/Y/R/B/O NT_008413AL35805317234291  AL13697817234291730270936782394
S/G/Y/R/B/O NT_008413AC02205317570921chr9NT_008413AL35628417685793637841830255168165
S/G/Y/R/B/O NT_008413AC02205317570921chr9NT_008413AL35359019491903390353587774050362
S/G/Y/R/B/O NT_008413AL35628417685793chr9NT_008413AL353590194919030019991999
S/G/Y/R/B/O NT_008413AL35628417685793chr9NT_008413AL35805317234291667230066723
S/G/Y/R/B/O NT_008413AL35628417685793  AL1369781757092113733556646854149853
S/G/Y/R/B/O NT_008413AL35359019491903chr9NT_008413AL591644210711730199701997
S/G/Y/R/B/O NT_008413AL35359019491903chr9NT_008413AC02205317570921390353587774050362
S/G/Y/R/B/O NT_008413AL59164421071173chr9NT_008413AL359076220286432000002000
S/G/Y/R/B/O NT_008413AL35907622028643chr9NT_008413AL1387552339723300100100
S/G/Y/R/B/O NT_008413AL13875523397233chr9NT_008413AL3536672499661300100100
S/G/Y/R/B/O NT_008413AL35366724996613chr9NT_008413AL3536142667927300100100
S/G/Y/R/B/O NT_008413AL35361426679273chr9NT_008413AL450467278708230000
S/G/Y/R/B/O NT_008413AL45046727870823chr9NT_008413AL354723286194330000
S/G/Y/R/B/O NT_008413AL45046727870823  AC01922224996611749380074938
S/G/Y/R/B/O NT_008413AL35472328619433chr9NT_008413AL589675301987632000002000
S/G/Y/R/B/O NT_008413AL35472328619433  AC0192222499661112371401234124948
S/G/Y/R/B/O NT_008413AL58967530198763chr9NT_008413AL359077312765932000002000
S/G/Y/R/B/O NT_008413AL35907731276593chr9NT_008413AL133549330816530000
S/G/Y/R/B/O NT_008413AL35907731276593  AL3546583127659112655500126555
S/G/Y/R/B/O NT_008413AL35907731276593  AL35903231276591120330256013689149620
S/G/Y/R/B/O NT_008413AL13354933081653chr9NT_008413AL354941347030232000002000
S/G/Y/R/B/O NT_008413AL13354933081653  AC01583330198761438530043853
S/G/Y/R/B/O NT_008413AL13354933081653  AL35465830198761675250067525
S/G/Y/R/B/O NT_008413AL35494134703023chr9NT_008413AL603631356133130000
S/G/Y/R/B/O NT_008413AL35494134703023  AC015833347030214868368082027375764
S/G/Y/R/B/O NT_008413AL35494134703023  AL15816133081651531272591055718
S/G/Y/R/B/O NT_008413AL60363135613313chr9NT_008413AL365202356332530000
S/G/Y/R/B/O NT_008413AL36520235633253chr9NT_008413AL354977373848932000002000
S/G/Y/R/B/O NT_008413AL36520235633253  AC01583333081651544420054442
S/G/Y/R/B/O NT_008413AL36520235633253  AL158161330816515215121301239766678
S/G/Y/R/B/O NT_008413AL35497737384893chr9NT_008413AL353577389993632000002000
S/G/Y/R/B/O NT_008413AL35357738999363chr9NT_008413AL137071395912032000002000
S/G/Y/R/B/O NT_008413AL13707139591203chr9NT_008413AL158012412911030000
S/G/Y/R/B/O NT_008413AL13707139591203  AC01645337384891641510416668317
S/G/Y/R/B/O NT_008413AL13707139591203  AC0193053738489115975043753844167969
S/G/Y/R/B/O NT_008413AL15801241291103chr9NT_008413AL359095425348432000002000
S/G/Y/R/B/O NT_008413AL15801241291103  AC0164533899936110611602369108485
S/G/Y/R/B/O NT_008413AL35909542534843chr9NT_008413AL133283428389930199601996
S/G/Y/R/B/O NT_008413AL13328342838993chr9NT_008413AL162419444050123140003140
S/G/Y/R/B/O NT_008413AL16241944405012chr9NT_008413AL16258746110083186820018682
S/G/Y/R/B/O NT_008413AL16258746110083chr9NT_008413AL136231475443630000
S/G/Y/R/B/O NT_008413AL13623147544363chr9NT_008413AL353151491434830199701997
S/G/Y/R/B/O NT_008413AL13623147544363  AC0234794440501163053422741324108604
S/G/Y/R/B/O NT_008413AL35315149143483chr9NT_008413AL158147502492130199901999
S/G/Y/R/B/O NT_008413AL35315149143483  AL35314250249211411692552043721
S/G/Y/R/B/O NT_008413AL15814750249213chr9NT_008413AL5133505195107300100100
S/G/Y/R/B/O NT_008413AL15814750249213  AL35314250249211249791233026212
S/G/Y/R/B/O NT_008413AL51335051951073chr9NT_008413AL161450521207530000
S/G/Y/R/B/O NT_008413AL16145052120753chr9NT_008413AL133547538312130000
S/G/Y/R/B/O NT_008413AL13354753831213chr9NT_008413AL135786549128630000
S/G/Y/R/B/O NT_008413AL13578654912863chr9NT_008413AL1622535647778300100100
S/G/Y/R/B/O NT_008413AL16225356477783chr9NT_008413AL3547445794005300100100
S/G/Y/R/B/O NT_008413AL35474457940053chr9NT_008413AL1369805842864300100100
S/G/Y/R/B/O NT_008413AL13698058428643chr9NT_008413AL365360601232630000
S/G/Y/R/B/O NT_008413AL36536060123263chr9NT_008413AL353606616924930000
S/G/Y/R/B/O NT_008413AL36536060123263  AC02225257940051495351883298554403
S/G/Y/R/B/O NT_008413AL35360661692493chr9NT_008413AL162384619894332000002000
S/G/Y/R/B/O NT_008413AL35360661692493  AC02225257940051232226340029562
S/G/Y/R/B/O NT_008413AL16238461989433chr9NT_008413AL353741626540830000
S/G/Y/R/B/O NT_008413AL16238461989433  AC02225261989431561933214135260759
S/G/Y/R/B/O NT_008413AL35374162654083chr9NT_008413AL3602216464825300100100
S/G/Y/R/B/O NT_008413AL36022164648253chr9NT_008413AL1334806470674300100100
S/G/Y/R/B/O NT_008413AL13348064706743chr9NT_008413AL353718666024630199801998
S/G/Y/R/B/O NT_008413AL13348064706743  AC0216456265408150948229376461129702
S/G/Y/R/B/O NT_008413AL35371866602463chr9NT_008413AL162411680499232000002000
S/G/Y/R/B/O NT_008413AL16241168049923chr9NT_008413AL354707686295610000
S/G/Y/R/B/O NT_008413AL16241168049923  AC01258368049921406852649121244546
S/G/Y/R/B/O NT_008413AL35470768629561chr9NT_008413AL445592703192632000002000
S/G/Y/R/B/O NT_008413AL35470768629561  AC0125836660246155691201281087686695
S/G/Y/R/B/O NT_008413AL44559270319263chr9NT_008413AL51341270996323409760040976
S/G/Y/R/B/O NT_008413AL51341270996323chr9NT_008413AL13702072503253879300087930
S/G/Y/R/B/O NT_008413AL13702072503253chr9NT_008413AL161443734445630000
S/G/Y/R/B/O NT_008413AL16144373444563chr9NT_008413AL513313748479530199501995
S/G/Y/R/B/O NT_008413AL51331374847953chr9NT_008413AL157703750820132000002000
S/G/Y/R/B/O NT_008413AL15770375082013chr9NT_008413AL391872759647930199501995
S/G/Y/R/B/O NT_008413AL39187275964793chr9NT_008413AL591509777041730000
S/G/Y/R/B/O NT_008413AL39187275964793  AC02347574847951144680014468
S/G/Y/R/B/O NT_008413AL59150977704173chr9NT_008413AL354694787526130000
S/G/Y/R/B/O NT_008413AL59150977704173  AC023475132032258149138053365102503
S/G/Y/R/B/O NT_008413AL35469478752613chr9NT_008413AL39198380284853009999
S/G/Y/R/B/O NT_008413AL35469478752613  AC0234751320322581282770661734894
S/G/Y/R/B/O NT_008413AL35469478752613  AL1359001320322581151445042272022906
S/G/Y/R/B/O NT_008413AL39198380284853chr9NT_008413AL1359238107768300100100
S/G/Y/R/B/O NT_008413AL39198380284853  AL13590080284851184149799028213
S/G/Y/R/B/O NT_008413AL13592381077683chr9NT_008413AL1357888260138300100100
S/G/Y/R/B/O NT_008413AL13578882601383chr9NT_008413AL3577738356241300100100
S/G/Y/R/B/O NT_008413AL35777383562413chr9NT_008413AL445926838901630000
S/G/Y/R/B/O NT_008413AL44592683890163chr9NT_008413AL5903978556169311022700110227
S/G/Y/R/B/O NT_008413AL44592683890163  AC0264668260138288781095789738
S/G/Y/R/B/O NT_008413AL44592683890163  AL3912758260138112284520965020129961
S/G/Y/R/B/O NT_008413AL44592683890163  AL3913818260138128692129921022851912
S/G/Y/R/B/O NT_008413AL59039785561693chr9NT_008413AL13712586142653124160012416
S/G/Y/R/B/O NT_008413AL59039785561693  AC0264668556169216855901200169759
S/G/Y/R/B/O NT_008413AL59039785561693  AL39127586142651827820502087802
S/G/Y/R/B/O NT_008413AL59039785561693  AL3913818614265118405129921022841625
S/G/Y/R/B/O NT_008413AL13712586142653chr9NT_008413AL3565848694233300100100
S/G/Y/R/B/O NT_008413AL35658486942333chr9NT_008413AL583805885972232000002000
S/G/Y/R/B/O NT_008413AL58380588597223chr9NT_008413AL451130894745032000002000
S/G/Y/R/B/O NT_008413AL45113089474503chr9NT_008413AL669908904567830199401994
S/G/Y/R/B/O NT_008413AL45113089474503  AC01164289474501180330018033
S/G/Y/R/B/O NT_008413AL66990890456783chr9NT_008413AL596451904840532000002000
S/G/Y/R/B/O NT_008413AL59645190484053chr9NT_008413AL353638917691820000
S/G/Y/R/B/O NT_008413AL59645190484053  AC01164290484051114094123520126446
S/G/Y/R/B/O NT_008413AL35363891769182chr9NT_008413AL591133933598532000002000
S/G/Y/R/B/O NT_008413AL35363891769182  AC0116429045678110069091410983
S/G/Y/R/B/O NT_008413AL35363891769182  AC0164189045678113119400131194
S/G/Y/R/B/O NT_008413AL35363891769182  AL3560339045678213484300134843
S/G/Y/R/B/O NT_008413AL59113393359853chr9NT_008413AL591622940046230000
S/G/Y/R/B/O NT_008413AL59113393359853  AC01641893359851302081639254634393
S/G/Y/R/B/O NT_008413AL59113393359853  AL35603391769182664180066418
S/G/Y/R/B/O NT_008413AL59162294004623chr9NT_008413AL354722948840630199201992
S/G/Y/R/B/O NT_008413AL59162294004623  AL391643948840613000610073040079
S/G/Y/R/B/O NT_008413AL35472294884063chr9NT_008413AL353733961245230000
S/G/Y/R/B/O NT_008413AL35472294884063  AL39164394884061239289164033092
S/G/Y/R/B/O NT_008413AL35373396124523chr9NT_008413AL1578269707794300100100
S/G/Y/R/B/O NT_008413AL15782697077943chr9NT_008413AL3918649856781300100100
S/G/Y/R/B/O NT_008413AL39186498567813chr9NT_008413AL51342298876013267250026725
S/G/Y/R/B/O NT_008413AL51342298876013chr9NT_008413AL13785110026825310031500100315
S/G/Y/R/B/O NT_008413AL137851100268253chr9NT_008413AL44188410065410300100100
S/G/Y/R/B/O NT_008413AL441884100654103chr9NT_008413AL3907231020309330000
S/G/Y/R/B/O NT_008413AL390723102030933chr9NT_008413AL1334791029763630000
S/G/Y/R/B/O NT_008413AL390723102030933  AC013781100268251346211879036500
S/G/Y/R/B/O NT_008413AL390723102030933  AC037423100268253653010065301
S/G/Y/R/B/O NT_008413AL133479102976363chr9NT_008413AL5903071046503330198501985
S/G/Y/R/B/O NT_008413AL133479102976363  AC013781100268251454272113047540
S/G/Y/R/B/O NT_008413AL133479102976363  AC03742310026825310569300105693
S/G/Y/R/B/O NT_008413AL590307104650333chr9NT_008413AL1370691046702712000002000
S/G/Y/R/B/O NT_008413AL137069104670271chr9NT_008413AL3560541063687932000002000
S/G/Y/R/B/O NT_008413AL356054106368793chr9NT_008413AL1357901067204930199401994
S/G/Y/R/B/O NT_008413AL135790106720493chr9NT_008413AL5130241084632232000002000
S/G/Y/R/B/O NT_008413AL513024108463223chr9NT_008413AL1617881092527932000002000
S/G/Y/R/B/O NT_008413AL161788109252793chr9NT_008413AL162413110937392439460043946
S/G/Y/R/B/O NT_008413AL162413110937392chr9NT_008413AL3549521120404032000002000
S/G/Y/R/B/O NT_008413AL354952112040403chr9NT_008413AL3549921125880432000002000
S/G/Y/R/B/O NT_008413AL354992112588043chr9NT_008413AL45112911430715300100100
S/G/Y/R/B/O NT_008413AL451129114307153chr9NT_008413AL35567211506643300100100
S/G/Y/R/B/O NT_008413AL355672115066433chr9NT_008413AL44558611592914300100100
S/G/Y/R/B/O NT_008413AL445586115929143chr9NT_008413AL5922271179131232000002000
S/G/Y/R/B/O NT_008413AL445586115929143  AC015898114307151418150041815
S/G/Y/R/B/O NT_008413AL592227117913123chr9NT_008413AL5133321184484730199501995
S/G/Y/R/B/O NT_008413AL592227117913123  AC015898117913121555340055534
S/G/Y/R/B/O NT_008413AL513332118448473chr9NT_008413AL5125961196737832000002000
S/G/Y/R/B/O NT_008413AL513332118448473  AC015898118448471626762716065392
S/G/Y/R/B/O NT_008413AL512596119673783chr9NT_008413AL3535951198850332000002000
S/G/Y/R/B/O NT_008413AL353595119885033chr9NT_008413AL5962621215413232000002000
S/G/Y/R/B/O NT_008413AL596262121541323chr9NT_008413AL5896781219327132000002000
S/G/Y/R/B/O NT_008413AL589678121932713chr9NT_008413AL3577721232619330199801998
S/G/Y/R/B/O NT_008413AL357772123261933chr9NT_008413AL1624221248669832000002000
S/G/Y/R/B/O NT_008413AL162422124866983chr9NT_008413AL3536051255000930197801978
S/G/Y/R/B/O NT_008413AL353605125500093chr9NT_008413AL13911412683163300100100
S/G/Y/R/B/O NT_008413AL139114126831633chr9NT_008413AL13875312815202300100100
S/G/Y/R/B/O NT_008413AL138753128152023chr9NT_008413AL15782812977253300100100
S/G/Y/R/B/O NT_008413AL138753128152023  AF001295125500093246160024616
S/G/Y/R/B/O NT_008413AL157828129772533chr9NT_008413AL3537111307808030199001990
S/G/Y/R/B/O NT_008413AL353711130780803chr9NT_008413AL1614491315543132000002000
S/G/Y/R/B/O NT_008413AL161449131554313chr9NT_008413AL3536391332309132000002000
S/G/Y/R/B/O NT_008413AL353639133230913chr9NT_008413AL1623861342491332000002000
S/G/Y/R/B/O NT_008413AL162386134249133chr9NT_008413AL583785135870513612050061205
S/G/Y/R/B/O NT_008413AL583785135870513chr9NT_008413AL354948137005873778190077819
S/G/Y/R/B/O NT_008413AL354948137005873chr9NT_008413AL1387501379786532000002000
S/G/Y/R/B/O NT_008413AL138750137978653chr9NT_008413AL3538101382348332000002000
S/G/Y/R/B/O NT_008413AL353810138234833chr9NT_008413AL1581571393281330000
S/G/Y/R/B/O NT_008413AL353810138234833  AC016003137005871174882703020191
S/G/Y/R/B/O NT_008413AL158157139328133chr9NT_008413AL691508141161231866580086658
S/G/Y/R/B/O NT_008413AL158157139328133  AC01600313797865114459297367493161821
S/G/Y/R/B/O NT_008413AL158157139328133  AC01840713797865123594084324437
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