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  Chromosome 9 - Clone Overlaps - Single Contig
 
Description of this page Main Reports Page Main Assembly Page Main Overlap Page Whole Chromosome Single Contigs

Line color code:

  • White: overlap with immediately succeeding clone
  • Green: overlap with clone in same contig
  • Pink: overlap with clone in same chromosome, different contig
  • Red: overlap with clone on different chromosome
  • Yellow: overlap with clone not used in assembly
NT_033218 NT_008413 NT_027081 NT_023974 NT_030040 NT_033214 NT_030759 NT_030753
NT_033213 NT_033210 NT_008389 NT_033219 NT_033217 NT_029359 NT_033209 NT_033206
NT_033208 NT_033212 NT_033205 NT_033203 NT_031832 NT_033211 NT_033207 NT_008580
NT_023935 NT_028278 NT_023975 NT_023946 NT_023932 NT_024010 NT_033202 NT_008476
NT_033216 NT_008470 NT_008438 NT_017568 NT_029366 NT_008338 NT_031835 NT_017539
NT_008554 NT_023969 NT_030058 NT_019501 NT_033215 NT_024000 NT_023929 NT_023989


  NT_029366
 
LinksContig1Acc1Start1PhsChr2Contig2Acc2Start2PhsStrong OverlapMedium OverlapWeak OverlapTotal Overlap
S/G/Y/R/B/O NT_029366AC0064301120123583chr9NT_029366AL137068112207157300100100
S/G/Y/R/B/O NT_029366AC0064301120123583  AL3547921122071571956910095691
S/G/Y/R/B/O NT_029366AL1370681122071573chr9NT_029366AL51312211235408630000
S/G/Y/R/B/O NT_029366AL5131221123540863chr9NT_029366AL16178411246291630000
S/G/Y/R/B/O NT_029366AL5131221123540863  AC01196911201235813395202183755789
S/G/Y/R/B/O NT_029366AL1617841124629163chr9NT_029366AL35964411248018530000
S/G/Y/R/B/O NT_029366AL1617841124629163  AC0119691120123581191140019114
S/G/Y/R/B/O NT_029366AL1617841124629163  X851171120123583148320014832
S/G/Y/R/B/O NT_029366AL3596441124801853chr9NT_029366AL35793611265078530000
S/G/Y/R/B/O NT_029366AL3596441124801853  AC011969112012358189837018952108789
S/G/Y/R/B/O NT_029366AL3579361126507853chr9NT_029366AL36527411275631430199701997
S/G/Y/R/B/O NT_029366AL3579361126507853  AL353609112012358187761012432100193
S/G/Y/R/B/O NT_029366AL3652741127563143chr9NT_029366AL450285112926255113887700138877
S/G/Y/R/B/O NT_029366AL3652741127563143  AL3536091127563141558050055805
S/G/Y/R/B/O NT_029366AL4502851129262551chr9NT_029366AL5962441129346123290610029061
S/G/Y/R/B/O NT_029366AL4502851129262551  AL3536091129262551243790024379
S/G/Y/R/B/O NT_029366AL5962441129346123chr9NT_029366AL44558711297808132000002000
S/G/Y/R/B/O NT_029366AL4455871129780813chr9NT_029366AL44263411314914332000002000
S/G/Y/R/B/O NT_029366AL4426341131491433chr9NT_029366AL16242311320508632000002000
S/G/Y/R/B/O NT_029366AL1624231132050863chr9NT_029366AL162424113291409300100100
S/G/Y/R/B/O NT_029366AL1624241132914093chr9NT_029366AL35963611351432930000
S/G/Y/R/B/O NT_029366AL1624241132914093  AF4402041131491433177220017722
S/G/Y/R/B/O NT_029366AL1624241132914093  AL35376711320508619922323150101538
S/G/Y/R/B/O NT_029366AL3596361135143293chr9NT_029366AL16225411370816530000
S/G/Y/R/B/O NT_029366AL3596361135143293  AL35376711320508617548023201980297602
S/G/Y/R/B/O NT_029366AL1622541137081653chr9NT_029366AC0063131138175793784370078437
S/G/Y/R/B/O NT_029366AC0063131138175793chr9NT_029366AL35951211392567930199901999
S/G/Y/R/B/O NT_029366AL3595121139256793chr9NT_029366AC00706611398256330199901999
S/G/Y/R/B/O NT_029366AC0070661139825633chr9NT_029366AL35894611417137930000
S/G/Y/R/B/O NT_029366AC0070661139825633  AC0184661139825631142722045768188490
S/G/Y/R/B/O NT_029366AL3589461141713793chr9NT_029366AL36533811418303930000
S/G/Y/R/B/O NT_029366AL3589461141713793  AC0071721139256793136600013660
S/G/Y/R/B/O NT_029366AL3653381141830393chr9NT_029366AL36550411433126930000
S/G/Y/R/B/O NT_029366AL3653381141830393  AC007172113925679315005300150053
S/G/Y/R/B/O NT_029366AL3655041143312693chr9NT_029366AL44548911448578130199701997
S/G/Y/R/B/O NT_029366AL4454891144857813chr9NT_029366AL16179011465965030000
S/G/Y/R/B/O NT_029366AL4454891144857813chr9NT_029366AC0107411147785461448471725046572
S/G/Y/R/B/O NT_029366AL1617901146596503chr9NT_029366AC010741114778546175074044667119741
S/G/Y/R/B/O NT_029366AC0107411147785461chr9NT_029366AL3907741147977761212300021230
S/G/Y/R/B/O NT_029366AC0107411147785461chr9NT_029366AL4454891144857813448471725046572
S/G/Y/R/B/O NT_029366AL3907741147977761chr9NT_029366AL15820811498359930000
S/G/Y/R/B/O NT_029366AL1582081149835993chr9NT_029366AC006450114991943300100100
S/G/Y/R/B/O NT_029366AC0064501149919433chr9NT_029366AL1580521151693981512700051270
S/G/Y/R/B/O NT_029366AC0064501149919433  AL160164114983599114844619819649160076
S/G/Y/R/B/O NT_029366AL1580521151693981chr9NT_029366AL44528411534001532000002000
S/G/Y/R/B/O NT_029366AL1580521151693981  AC02489911499194311293548021378131518
S/G/Y/R/B/O NT_029366AL1580521151693981  AL1601641149919431290580029058
S/G/Y/R/B/O NT_029366AL4452841153400153chr9NT_029366AL16272411534200932000002000
S/G/Y/R/B/O NT_029366AL1627241153420093chr9NT_029366AL13784611546255130000
S/G/Y/R/B/O NT_029366AL1378461154625513chr9NT_029366AL35497911562529032000002000
S/G/Y/R/B/O NT_029366AL3549791156252903chr9NT_029366AL6698181157092872748160074816
S/G/Y/R/B/O NT_029366AL3549791156252903  AL16145611546255112528612631432242239
S/G/Y/R/B/O NT_029366AL6698181157092872chr9NT_029366AL1580751157739963346830034683
S/G/Y/R/B/O NT_029366AL6698181157092872  AL161456115773996180855197377514108106
S/G/Y/R/B/O NT_029366AL1580751157739963chr9NT_029366AL354928115876863300100100
S/G/Y/R/B/O NT_029366AL1580751157739963  AL1614561156252901196654945246627076
S/G/Y/R/B/O NT_029366AL3549281158768633chr9NT_029366AL45112511605330230000
S/G/Y/R/B/O NT_029366AL4511251160533023chr9NT_029366AL44593011618247430199801998
S/G/Y/R/B/O NT_029366AL4511251160533023  AC0091951157739961223350022335
S/G/Y/R/B/O NT_029366AL4511251160533023  AL15999311577399618493901020295141
S/G/Y/R/B/O NT_029366AL4459301161824743chr9NT_029366AL35471011634962330000
S/G/Y/R/B/O NT_029366AL4459301161824743  AC009195116182474188160163640952130748
S/G/Y/R/B/O NT_029366AL4459301161824743  AL1599931161824741402080040208
S/G/Y/R/B/O NT_029366AL4459301161824743  AL4452341161824741243245315363133270
S/G/Y/R/B/O NT_029366AL3547101163496233chr9NT_029366AL6272231164793311406080040608
S/G/Y/R/B/O NT_029366AL3547101163496233chr9NT_029366AC02615511654499212191202373745649
S/G/Y/R/B/O NT_029366AL3547101163496233  AL44523411654499211130588401049630641
S/G/Y/R/B/O NT_029366AL3547101163496233  AL5838231165449921772740941086684
S/G/Y/R/B/O NT_029366AL6272231164793311chr9NT_029366AC026155116544992153198055694108892
S/G/Y/R/B/O NT_029366AL6272231164793311chr9NT_029366AL3596321165649553601190060119
S/G/Y/R/B/O NT_029366AL6272231164793311  AL583823116564955195680012325108005
S/G/Y/R/B/O NT_029366AC0261551165449921chr9NT_029366AL35963211656495530000
S/G/Y/R/B/O NT_029366AC0261551165449921chr9NT_029366AL35471011634962332191202373745649
S/G/Y/R/B/O NT_029366AC0261551165449921  AL58382311634962313450920982413160738
S/G/Y/R/B/O NT_029366AL3596321165649553chr9NT_029366AL16258411666035230199801998
S/G/Y/R/B/O NT_029366AL3596321165649553chr9NT_029366AL6272231164793311601190060119
S/G/Y/R/B/O NT_029366AL1625841166603523chr9NT_029366AL35807411681853030199901999
S/G/Y/R/B/O NT_029366AL3580741168185303chr9NT_029366AL62730311692561132000002000
S/G/Y/R/B/O NT_029366AL6273031169256113chr9NT_029366AL44518611699380310199901999
S/G/Y/R/B/O NT_029366AL4451861169938031chr9NT_029366AL5899231171479272617680061768
S/G/Y/R/B/O NT_029366AL4451861169938031  AL162387116993803113616100136161
S/G/Y/R/B/O NT_029366AL5899231171479272chr9NT_029366AL4456641172486143542150054215
S/G/Y/R/B/O NT_029366AL5899231171479272  AL1623871169256111819160081916
S/G/Y/R/B/O NT_029366AL4456641172486143chr9NT_029366AL16239111740961630199601996
S/G/Y/R/B/O NT_029366AL1623911174096163chr9NT_029366AC00644311743603630199801998
S/G/Y/R/B/O NT_029366AC0064431174360363chr9NT_029366AL35630911764267232000002000
S/G/Y/R/B/O NT_029366AL3563091176426723chr9NT_029366AL16190811768692732000002000
S/G/Y/R/B/O NT_029366AL1619081176869273chr9NT_029366AL161731117791143300100100
S/G/Y/R/B/O NT_029366AL1617311177911433chr9NT_029366AL3549441179734951002333123331
S/G/Y/R/B/O NT_029366AL3549441179734951chr9NT_029366AL13610811799568910000
S/G/Y/R/B/O NT_029366AL3549441179734951chr9NT_029366AL1601691193634583871440087144
S/G/Y/R/B/O NT_029366AL1361081179956891chr9NT_029366AL36000411800504730000
S/G/Y/R/B/O NT_029366AL1361081179956891  AL67214211922330914832502672475049
S/G/Y/R/B/O NT_029366AL3600041180050473chr9NT_029366AL39210511818525830000
S/G/Y/R/B/O NT_029366AL3600041180050473  AC0062411192233093753980075398
S/G/Y/R/B/O NT_029366AL3921051181852583chr9NT_029366AL13614111821913530000
S/G/Y/R/B/O NT_029366AL3921051181852583  AC0062411192233093358770035877
S/G/Y/R/B/O NT_029366AL1361411182191353chr9NT_029366AL158207118346918300100100
S/G/Y/R/B/O NT_029366AL1361411182191353  AC0062411192233093798010079801
S/G/Y/R/B/O NT_029366AL1361411182191353  AC0270081192233091147752654669424123
S/G/Y/R/B/O NT_029366AL1582071183469183chr9NT_029366AL59221911851488130000
S/G/Y/R/B/O NT_029366AL1582071183469183  AC0156671183469181112810011281
S/G/Y/R/B/O NT_029366AL1582071183469183  AC027008118346918113145249532902139307
S/G/Y/R/B/O NT_029366AL5922191185148813chr9NT_029366AL59036911857448732000002000
S/G/Y/R/B/O NT_029366AL5922191185148813  AC01566711821913513964610690050336
S/G/Y/R/B/O NT_029366AL5903691185744873chr9NT_029366AL39105611869824330000
S/G/Y/R/B/O NT_029366AL5903691185744873  AC0077791185744871887803641331295733
S/G/Y/R/B/O NT_029366AL5903691185744873  AC0156671185744871732427018555885818
S/G/Y/R/B/O NT_029366AL3910561186982433chr9NT_029366AL35380311882570532000002000
S/G/Y/R/B/O NT_029366AL3910561186982433  AC0077791185148811687631718205872539
S/G/Y/R/B/O NT_029366AL3910561186982433  AC0730751185148811268820255629438
S/G/Y/R/B/O NT_029366AL3538031188257053chr9NT_029366AL16178511898940132000002000
S/G/Y/R/B/O NT_029366AL3538031188257053  AC07307511882570514509804615591253
S/G/Y/R/B/O NT_029366AL1617851189894013chr9NT_029366AL15815111906086432000002000
S/G/Y/R/B/O NT_029366AL1581511190608643chr9NT_029366AL5922111192233092534770053477
S/G/Y/R/B/O NT_029366AL5922111192233092chr9NT_029366AL16016911936345830000
S/G/Y/R/B/O NT_029366AL5922111192233092  AL6721421190608641195160019516
S/G/Y/R/B/O NT_029366AL1601691193634583chr9NT_029366AL35686211948748332000002000
S/G/Y/R/B/O NT_029366AL1601691193634583chr9NT_029366AL3549441179734951871440087144
S/G/Y/R/B/O NT_029366AL3568621194874833chr9NT_029366AL35762311963096430199601996
S/G/Y/R/B/O NT_029366AL3576231196309643chr9NT_029366AL45026311966838430199801998
S/G/Y/R/B/O NT_029366AL3576231196309643  AL3547051196309641203830020383
S/G/Y/R/B/O NT_029366AL4502631196683843chr9NT_029366AL44522211982405630000
S/G/Y/R/B/O NT_029366AL4502631196683843  AL354705119668384114227300142273
S/G/Y/R/B/O NT_029366AL4452221198240563chr9NT_029366AL39011612004932630199601996
S/G/Y/R/B/O NT_029366AL3901161200493263chr9NT_029366AL16242612006842832000002000
S/G/Y/R/B/O NT_029366AL1624261200684283chr9NT_029366AC007430120229766114579445002844153138
S/G/Y/R/B/O NT_029366AL1624261200684283chr9NT_029366AL1625861202480002450930045093
S/G/Y/R/B/O NT_029366AC0074301202297661chr9NT_029366AL1625861202480002473170047317
S/G/Y/R/B/O NT_029366AL1625861202480002chr9NT_029366AL1579351203067082667100066710
S/G/Y/R/B/O NT_029366AL1625861202480002chr9NT_029366AL1624261200684283450930045093
S/G/Y/R/B/O NT_029366AL1579351203067082chr9NT_029366AL360268120470909300303303
S/G/Y/R/B/O NT_029366AL3602681204709093chr9NT_029366AL59070812058073622000002000
S/G/Y/R/B/O NT_029366AL5907081205807362chr9NT_029366AL59072212077279230200002000
S/G/Y/R/B/O NT_029366AL5907081205807362  AC0063121205807363555380055538
S/G/Y/R/B/O NT_029366AL5907221207727923chr9NT_029366AL35909112078284530200002000
S/G/Y/R/B/O NT_029366AL5907221207727923  AC0063121207727923120530012053
S/G/Y/R/B/O NT_029366AL3590911207828453chr9NT_029366AL44528712096528832000002000
S/G/Y/R/B/O NT_029366AL3590911207828453  AC006312120580736314402200144022
S/G/Y/R/B/O NT_029366AL4452871209652883chr9NT_029366AL35648112100140432000002000
S/G/Y/R/B/O NT_029366AL3564811210014043chr9NT_029366AL35967812117507032000002000
S/G/Y/R/B/O NT_029366AL3596781211750703chr9NT_029366AL44199212118145432000002000
S/G/Y/R/B/O NT_029366AL4419921211814543         
S/G/Y/R/B/O NT_029366AL4419921211814543  AF2090691211814542329131633034546
S/G/Y/R/B/O NT_029366AL4419921211814543  AL672142121175070116666200166662