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  Chromosome 9 - Clone Overlaps - Single Contig
 
Description of this page Main Reports Page Main Assembly Page Main Overlap Page Whole Chromosome Single Contigs

Line color code:

  • White: overlap with immediately succeeding clone
  • Green: overlap with clone in same contig
  • Pink: overlap with clone in same chromosome, different contig
  • Red: overlap with clone on different chromosome
  • Yellow: overlap with clone not used in assembly
NT_033218 NT_008413 NT_027081 NT_023974 NT_030040 NT_033214 NT_030759 NT_030753
NT_033213 NT_033210 NT_008389 NT_033219 NT_033217 NT_029359 NT_033209 NT_033206
NT_033208 NT_033212 NT_033205 NT_033203 NT_031832 NT_033211 NT_033207 NT_008580
NT_023935 NT_028278 NT_023975 NT_023946 NT_023932 NT_024010 NT_033202 NT_008476
NT_033216 NT_008470 NT_008438 NT_017568 NT_029366 NT_008338 NT_031835 NT_017539
NT_008554 NT_023969 NT_030058 NT_019501 NT_033215 NT_024000 NT_023929 NT_023989


  NT_008580
 
LinksContig1Acc1Start1PhsChr2Contig2Acc2Start2PhsStrong OverlapMedium OverlapWeak OverlapTotal Overlap
S/G/Y/R/B/O NT_008580AL353608599324963chr9NT_008580AL1614576010548730000
S/G/Y/R/B/O NT_008580AL161457601054873chr9NT_008580AL3536166022787530000
S/G/Y/R/B/O NT_008580AL161457601054873  AC025021321060111171500111715
S/G/Y/R/B/O NT_008580AL353616602278753chr9NT_008580AL3547946039586830000
S/G/Y/R/B/O NT_008580AL353616602278753  AC0250213210601243500024350
S/G/Y/R/B/O NT_008580AL354794603958683chr9NT_008580AL3562196054983930000
S/G/Y/R/B/O NT_008580AL356219605498393chr9NT_008580AL1627306066520832000002000
S/G/Y/R/B/O NT_008580AL162730606652083chr9NT_008580AL5902386083458932000002000
S/G/Y/R/B/O NT_008580AL590238608345893chr9NT_008580AL3581136087822630199801998
S/G/Y/R/B/O NT_008580AL358113608782263chr9NT_008580AL3551406100594422000002000
S/G/Y/R/B/O NT_008580AL355140610059442chr9NT_008580AL3536936118904030199401994
S/G/Y/R/B/O NT_008580AL353693611890403chr9NT_008580AL1624216125074132000002000
S/G/Y/R/B/O NT_008580AL162421612507413chr9NT_008580AL1624126135677312000002000
S/G/Y/R/B/O NT_008580AL162421612507413  AC008248610059441658020225668058
S/G/Y/R/B/O NT_008580AL162412613567731chr9NT_008580AL6036256154405032000002000
S/G/Y/R/B/O NT_008580AL162412613567731  AC008248611890401944892461096950
S/G/Y/R/B/O NT_008580AL603625615440503chr9NT_008580AL5912156155544222000002000
S/G/Y/R/B/O NT_008580AL591215615554422chr9NT_008580AL6066666170803430000
S/G/Y/R/B/O NT_008580AL591215615554422  AC022857615554421929671658131250140798
S/G/Y/R/B/O NT_008580AL591215615554422  AF165139615554422249300024930
S/G/Y/R/B/O NT_008580AL606666617080343chr9NT_008580AL3920446173605510199601996
S/G/Y/R/B/O NT_008580AL606666617080343  AF165139615440502303120030312
S/G/Y/R/B/O NT_008580AL392044617360551chr9NT_008580AL15815361901261300100100
S/G/Y/R/B/O NT_008580AL392044617360551  AF16513961736055210244800102448
S/G/Y/R/B/O NT_008580AL158153619012613chr9NT_008580AL1623906194627230000
S/G/Y/R/B/O NT_008580AL162390619462723chr9NT_008580AL4426456212859932000002000
S/G/Y/R/B/O NT_008580AL162390619462723  AL356139617360551324792248034727
S/G/Y/R/B/O NT_008580AL442645621285993chr9NT_008580AL3587866227728332000002000
S/G/Y/R/B/O NT_008580AL442645621285993  AL35613961946272113425919940136253
S/G/Y/R/B/O NT_008580AL358786622772833chr9NT_008580AL15999062396090300100100
S/G/Y/R/B/O NT_008580AL159990623960903chr9NT_008580AL35631862544823300100100
S/G/Y/R/B/O NT_008580AL356318625448233chr9NT_008580AL5924386268606232000002000
S/G/Y/R/B/O NT_008580AL592438626860623chr9NT_008580AL1619136272657530000
S/G/Y/R/B/O NT_008580AL592438626860623  AL592213625448232386780038678
S/G/Y/R/B/O NT_008580AL161913627265753chr9NT_008580AL1602736286247232000002000
S/G/Y/R/B/O NT_008580AL161913627265753  AL59221362862472211855500118555
S/G/Y/R/B/O NT_008580AL160273628624723chr9NT_008580AL39181963020406300100100
S/G/Y/R/B/O NT_008580AL391819630204063chr9NT_008580AL3921066318210830000
S/G/Y/R/B/O NT_008580AL391819630204063  AL360003628624721685520068552
S/G/Y/R/B/O NT_008580AL392106631821083chr9NT_008580AL16173263332779300100100
S/G/Y/R/B/O NT_008580AL392106631821083  AL360003633327791752020075202
S/G/Y/R/B/O NT_008580AL161732633327793chr9NT_008580AL671309634700702459920045992
S/G/Y/R/B/O NT_008580AL161732633327793  AC0247235249120315238237143442690522
S/G/Y/R/B/O NT_008580AL671309634700702chr9NT_008580AL138751635840463193270019327
S/G/Y/R/B/O NT_008580AL671309634700702  AC0247235249120313280218252635460981
S/G/Y/R/B/O NT_008580AL671309634700702  AC07312452491203191313035730127043
S/G/Y/R/B/O NT_008580AL138751635840463chr9NT_008580AL5838296377989032000002000
S/G/Y/R/B/O NT_008580AL583829637798903chr9NT_008580AL5903116382746332000002000
S/G/Y/R/B/O NT_008580AL590311638274633chr9NT_008580AL1359246395739632000002000
S/G/Y/R/B/O NT_008580AL135924639573963chr9NT_008580AL4456466411838130000
S/G/Y/R/B/O NT_008580AL135924639573963  AF062072637798903108010010801
S/G/Y/R/B/O NT_008580AL445646641183813chr9NT_008580AL5964486418240132000002000
S/G/Y/R/B/O NT_008580AL596448641824013chr9NT_008580AL4493236419087532000002000
S/G/Y/R/B/O NT_008580AL449323641908753chr9NT_008580AL5916626430825332000002000
S/G/Y/R/B/O NT_008580AL591662643082533chr9NT_008580AL5906626447706832000002000
S/G/Y/R/B/O NT_008580AL591662643082533  AL35963564182401110278400102784
S/G/Y/R/B/O NT_008580AL590662644770683chr9NT_008580AL1624166450923932000002000
S/G/Y/R/B/O NT_008580AL590662644770683  AL359635645092391329110032911
S/G/Y/R/B/O NT_008580AL162416645092393chr9NT_008580AL5910316458284830199801998
S/G/Y/R/B/O NT_008580AL591031645828483chr9NT_008580AL3599976471774530199701997
S/G/Y/R/B/O NT_008580AL359997647177453chr9NT_008580AL4490836488484832000002000
S/G/Y/R/B/O NT_008580AL449083648848483chr9NT_008580AL3556046501179322000002000
S/G/Y/R/B/O NT_008580AL355604650117932chr9NT_008580AL4511276519280330000
S/G/Y/R/B/O NT_008580AL355604650117932  AC053471647177451112661706012972
S/G/Y/R/B/O NT_008580AL451127651928033chr9NT_008580AL5125946530166130000
S/G/Y/R/B/O NT_008580AL451127651928033  AC05347164884848110623900106239
S/G/Y/R/B/O NT_008580AL451127651928033  AL391558648848481215940021594
S/G/Y/R/B/O NT_008580AL451127651928033  AL590712648848482694150069415
S/G/Y/R/B/O NT_008580AL512594653016613chr9NT_008580AL6273246546585330199501995
S/G/Y/R/B/O NT_008580AL512594653016613  AC0242876488484811065435430992112965
S/G/Y/R/B/O NT_008580AL512594653016613  AC053471416514091417242542117745443
S/G/Y/R/B/O NT_008580AL512594653016613  AL39155841651409175224070976146200
S/G/Y/R/B/O NT_008580AL512594653016613  AL59071241651409210331400103314
S/G/Y/R/B/O NT_008580AL627324654658533chr9NT_008580AL5131246549354020000
S/G/Y/R/B/O NT_008580AL513124654935402chr9NT_008580AL5126446566430632000002000
S/G/Y/R/B/O NT_008580AL513124654935402  AC02117765301661115148300151483
S/G/Y/R/B/O NT_008580AL512644656643063chr9NT_008580AL6036526580622530199701997
S/G/Y/R/B/O NT_008580AL603652658062253chr9NT_008580AL3578726586173232000002000
S/G/Y/R/B/O NT_008580AL357872658617323chr9NT_008580AL3551526595290430199901999
S/G/Y/R/B/O NT_008580AL357872658617323  AC019287656643061419530041953
S/G/Y/R/B/O NT_008580AL355152659529043chr9NT_008580AL3556746606905530000
S/G/Y/R/B/O NT_008580AL355152659529043  AC019287658062251197610019761
S/G/Y/R/B/O NT_008580AL355674660690553chr9NT_008580AL1370186624382930000
S/G/Y/R/B/O NT_008580AL137018662438293chr9NT_008580AL15883366400897300100100
S/G/Y/R/B/O NT_008580AL158833664008973chr9NT_008580AL35479566409667200100100
S/G/Y/R/B/O NT_008580AL354795664096672chr9NT_008580AL3908746660485730000
S/G/Y/R/B/O NT_008580AL390874666048573chr9NT_008580AL1588256661356230000
S/G/Y/R/B/O NT_008580AL158825666135623chr9NT_008580AL1335486674086130000
S/G/Y/R/B/O NT_008580AL133548667408613chr9NT_008580AL3537566689415330199901999
S/G/Y/R/B/O NT_008580AL353756668941533chr9NT_008580AL1580736703830830199801998
S/G/Y/R/B/O NT_008580AL158073670383083chr9NT_008580AL3537806722264130000
S/G/Y/R/B/O NT_008580AL158073670383083  AC01082867038308110059000100590
S/G/Y/R/B/O NT_008580AL353780672226413chr9NT_008580AL1602806730887932000002000
S/G/Y/R/B/O NT_008580AL353780672226413  AC0108286689415314194001329755237
S/G/Y/R/B/O NT_008580AL160280673088793chr9NT_008580AL1578836741591030000
S/G/Y/R/B/O NT_008580AL157883674159103chr9NT_008580AL3592536759078830199801998
S/G/Y/R/B/O NT_008580AL359253675907883chr9NT_008580AL3536076777839632000002000
S/G/Y/R/B/O NT_008580AL359253675907883  AL357653677783961638572120815374130
S/G/Y/R/B/O NT_008580AL353607677783963chr9NT_008580AL5896536791756632000002000
S/G/Y/R/B/O NT_008580AL353607677783963  AL3576531441817041712140071214
S/G/Y/R/B/O NT_008580AL589653679175663chr9NT_008580AL3918686802086530199501995
S/G/Y/R/B/O NT_008580AL391868680208653chr9NT_008580AL5906646812100230199901999
S/G/Y/R/B/O NT_008580AL590664681210023chr9NT_008580AL1616266818721930000
S/G/Y/R/B/O NT_008580AL590664681210023  AL138757681210021660290066029
S/G/Y/R/B/O NT_008580AL161626681872193chr9NT_008580AL3593146836907730000
S/G/Y/R/B/O NT_008580AL161626681872193  AC009556680208651464100046410
S/G/Y/R/B/O NT_008580AL161626681872193  AL138757680208651851050383088935
S/G/Y/R/B/O NT_008580AL161626681872193  AL161625680208651289190028919
S/G/Y/R/B/O NT_008580AL359314683690773chr9NT_008580AL3902396849745730000
S/G/Y/R/B/O NT_008580AL359314683690773  AC0095566802086517452601871493240
S/G/Y/R/B/O NT_008580AL359314683690773  AL161625163674211110802403250111274
S/G/Y/R/B/O NT_008580AL390239684974573chr9NT_008580AL353637686264661273610027361
S/G/Y/R/B/O NT_008580AL353637686264661chr9NT_008580AL1617896876911632000228304283
S/G/Y/R/B/O NT_008580AL161789687691163chr9NT_008580AL3537106883608532000002000
S/G/Y/R/B/O NT_008580AL353710688360853chr9NT_008580AL35920468944718300100100
S/G/Y/R/B/O NT_008580AL359204689447183chr9NT_008580AL15815969044309300100100
S/G/Y/R/B/O NT_008580AL158159690443093chr9NT_008580AL3537946921121530199901999
S/G/Y/R/B/O NT_008580AL158159690443093  AC016011688360851538970594359840
S/G/Y/R/B/O NT_008580AL353794692112153chr9NT_008580AL3598496927957130000
S/G/Y/R/B/O NT_008580AL353794692112153  AC016011689447181682880271170999
S/G/Y/R/B/O NT_008580AL359849692795713chr9NT_008580AL3555356929978230000
S/G/Y/R/B/O NT_008580AL359849692795713  AC016011690443091221590022159
S/G/Y/R/B/O NT_008580AL355535692997823chr9NT_008580AL1602686948444030000
S/G/Y/R/B/O NT_008580AL355535692997823  AC0121966904430914687224642509074426
S/G/Y/R/B/O NT_008580AL355535692997823  AC016011690443091132533079016332
S/G/Y/R/B/O NT_008580AL160268694844403chr9NT_008580AL16027869576162300100100
S/G/Y/R/B/O NT_008580AL160268694844403  AC01219669044309182776024983025
S/G/Y/R/B/O NT_008580AL160278695761623         
S/G/Y/R/B/O NT_008580AL160278695761623  AL16145669484440189066312132664122943