Home    Genome Browser    BLAT Search    Help
  Chromosome 9 - Clone Overlaps - Single Contig
 
Description of this page Main Reports Page Main Assembly Page Main Overlap Page Whole Chromosome Single Contigs

Line color code:

  • White: overlap with immediately succeeding clone
  • Green: overlap with clone in same contig
  • Pink: overlap with clone in same chromosome, different contig
  • Red: overlap with clone on different chromosome
  • Yellow: overlap with clone not used in assembly
NT_033218 NT_008413 NT_027081 NT_023974 NT_030040 NT_033214 NT_030759 NT_030753
NT_033213 NT_033210 NT_008389 NT_033219 NT_033217 NT_029359 NT_033209 NT_033206
NT_033208 NT_033212 NT_033205 NT_033203 NT_031832 NT_033211 NT_033207 NT_008580
NT_023935 NT_028278 NT_023975 NT_023946 NT_023932 NT_024010 NT_033202 NT_008476
NT_033216 NT_008470 NT_008438 NT_017568 NT_029366 NT_008338 NT_031835 NT_017539
NT_008554 NT_023969 NT_030058 NT_019501 NT_033215 NT_024000 NT_023929 NT_023989


  NT_008476
 
LinksContig1Acc1Start1PhsChr2Contig2Acc2Start2PhsStrong OverlapMedium OverlapWeak OverlapTotal Overlap
S/G/Y/R/B/O NT_008476AC074086818887211chr9NT_008476AL58384181891221363973106602361798250
S/G/Y/R/B/O NT_008476AC074086818887211chr9NT_008476AL39121982084020310252122932089843443
S/G/Y/R/B/O NT_008476AL583841818912213chr9NT_008476AL3912198208402032000002000
S/G/Y/R/B/O NT_008476AL391219820840203chr9NT_008476AL3547518222692032000002000
S/G/Y/R/B/O NT_008476AL391219820840203chr9NT_008476AC07408681888721110252122932089843443
S/G/Y/R/B/O NT_008476AL354751822269203chr9NT_008476AL13609782329148300100100
S/G/Y/R/B/O NT_008476AL136097823291483chr9NT_008476AL1378488252253630000
S/G/Y/R/B/O NT_008476AL136097823291483  AC01684444272655112671225740129286
S/G/Y/R/B/O NT_008476AL136097823291483  AL35492482226920114961900149619
S/G/Y/R/B/O NT_008476AL137848825225363chr9NT_008476AL157827826728773292260029226
S/G/Y/R/B/O NT_008476AL137848825225363  AB009589822269203123680012368
S/G/Y/R/B/O NT_008476AL137848825225363  AC025394822269201417040144043144
S/G/Y/R/B/O NT_008476AL137848825225363  AL354924826728771561750056175
S/G/Y/R/B/O NT_008476AL157827826728773chr9NT_008476AL13707482811385300100100
S/G/Y/R/B/O NT_008476AL157827826728773  AC025394826728771141238105526265158055
S/G/Y/R/B/O NT_008476AL137074828113853chr9NT_008476AL13698182894324300100100
S/G/Y/R/B/O NT_008476AL136981828943243chr9NT_008476AL3899248307650432000002000
S/G/Y/R/B/O NT_008476AL389924830765043chr9NT_008476AL4510658314690630200002000
S/G/Y/R/B/O NT_008476AL451065831469063chr9NT_008476AL390760833085953457300045730
S/G/Y/R/B/O NT_008476AL390760833085953chr9NT_008476AL3549918343866232000002000
S/G/Y/R/B/O NT_008476AL354991834386623chr9NT_008476AL5838398347360630000
S/G/Y/R/B/O NT_008476AL354991834386623chrXNT_030874AC02208263319101236780023678
S/G/Y/R/B/O NT_008476AL583839834736063chr9NT_008476AL3536298361232432000002000
S/G/Y/R/B/O NT_008476AL583839834736063chrXNT_030874AC022082633191013972102215961880
S/G/Y/R/B/O NT_008476AL353629836123243chr9NT_008476AL3591818378116930199501995
S/G/Y/R/B/O NT_008476AL359181837811693chr9NT_008476AL4422248394458430199501995
S/G/Y/R/B/O NT_008476AL442224839445843chr9NT_008476AL3570738404554112000268424427126
S/G/Y/R/B/O NT_008476AL357073840455411chr9NT_008476AL360020841452082697760069776
S/G/Y/R/B/O NT_008476AL360020841452082chr9NT_008476AL1581528430391830000
S/G/Y/R/B/O NT_008476AL360020841452082chr9NT_008476AC083821844772661342097482260844299
S/G/Y/R/B/O NT_008476AL360020841452082chr9NT_008476AC08778484485521152539048953028
S/G/Y/R/B/O NT_008476AL360020841452082  AC007924839445841511360156652702
S/G/Y/R/B/O NT_008476AL360020841452082  AL353226844855211642200064220
S/G/Y/R/B/O NT_008476AL158152843039183chr9NT_008476AL6698158441643530000
S/G/Y/R/B/O NT_008476AL158152843039183chr9NT_008476AC0838218447726614876526395846483624
S/G/Y/R/B/O NT_008476AL158152843039183chr9NT_008476AC087784844855211917432151260296496
S/G/Y/R/B/O NT_008476AL158152843039183  AC007924840455411759717678465688305
S/G/Y/R/B/O NT_008476AL669815844164353chr9NT_008476AL691447844584941438440043844
S/G/Y/R/B/O NT_008476AL669815844164353  AL160055844584941336900033690
S/G/Y/R/B/O NT_008476AL691447844584941chr9NT_008476AC0838218447726610011071107
S/G/Y/R/B/O NT_008476AL691447844584941  AL16005588778692112929818078939140044
S/G/Y/R/B/O NT_008476AC083821844772661chr9NT_008476AC087784844855211725092508614562112157
S/G/Y/R/B/O NT_008476AC083821844772661chr9NT_008476AL1581528430391834876526395846483624
S/G/Y/R/B/O NT_008476AC083821844772661chr9NT_008476AL360020841452082342097482260844299
S/G/Y/R/B/O NT_008476AC083821844772661  AC00792484416435142709230011084576555
S/G/Y/R/B/O NT_008476AC087784844855211chr9NT_008476AL3582328458693830000
S/G/Y/R/B/O NT_008476AC087784844855211chr9NT_008476AL158152843039183917432151260296496
S/G/Y/R/B/O NT_008476AC087784844855211chr9NT_008476AL36002084145208252539048953028
S/G/Y/R/B/O NT_008476AC087784844855211  AC007924844584941912772675539099342
S/G/Y/R/B/O NT_008476AL358232845869383chr9NT_008476AL1617288470127830019781978
S/G/Y/R/B/O NT_008476AL358232845869383  AC0683178445849413284975191331453682
S/G/Y/R/B/O NT_008476AL358232845869383  AL160055844584941359780035978
S/G/Y/R/B/O NT_008476AL161728847012783chr9NT_008476AL1579368486980730000
S/G/Y/R/B/O NT_008476AL161728847012783  AC0683178470127814627910153547861910
S/G/Y/R/B/O NT_008476AL157936848698073chr9NT_008476AC0156718499236614200811098272155827
S/G/Y/R/B/O NT_008476AC015671849923661chr9NT_008476AL353768850300593181770018177
S/G/Y/R/B/O NT_008476AL353768850300593chr9NT_008476AL3548938519612132000002000
S/G/Y/R/B/O NT_008476AL353768850300593  AC02218584992366115285726901080156627
S/G/Y/R/B/O NT_008476AL354893851961213chr9NT_008476AL1573848530010130000
S/G/Y/R/B/O NT_008476AL354893851961213  AC01666785196121147975162467250271
S/G/Y/R/B/O NT_008476AL354893851961213  AC027180851961211310062244196635216
S/G/Y/R/B/O NT_008476AL157384853001013chr9NT_008476AL4460238545814430199801998
S/G/Y/R/B/O NT_008476AL157384853001013chr9NT_008476AC027096856923341503860050386
S/G/Y/R/B/O NT_008476AL157384853001013  AC0166678503005916777403117998953
S/G/Y/R/B/O NT_008476AL157384853001013  AC02718085692334113370746173764142088
S/G/Y/R/B/O NT_008476AL446023854581443chr9NT_008476AL1617298550006320000
S/G/Y/R/B/O NT_008476AL446023854581443chr9NT_008476AC027096856923341382772444148942210
S/G/Y/R/B/O NT_008476AL161729855000632chr9NT_008476AC053475856877061117546104203918131884
S/G/Y/R/B/O NT_008476AL161729855000632chr9NT_008476AC027096856923341798093853179785459
S/G/Y/R/B/O NT_008476AC053475856877061chr9NT_008476AC027096856923341327946773309442661
S/G/Y/R/B/O NT_008476AC027096856923341chr9NT_008476AL3921858570535030000
S/G/Y/R/B/O NT_008476AC027096856923341chr9NT_008476AL157384853001013503860050386
S/G/Y/R/B/O NT_008476AC027096856923341chr9NT_008476AL161729855000632798093853179785459
S/G/Y/R/B/O NT_008476AC027096856923341chr9NT_008476AL446023854581443382772444148942210
S/G/Y/R/B/O NT_008476AC027096856923341  AC027180857053501304941882032376
S/G/Y/R/B/O NT_008476AL392185857053503chr9NT_008476AL3555368577503230000
S/G/Y/R/B/O NT_008476AL392185857053503  AC011845854581441312080031208
S/G/Y/R/B/O NT_008476AL355536857750323chr9NT_008476AL3548618577567430000
S/G/Y/R/B/O NT_008476AL354861857756743chr9NT_008476AL1614548595822730199901999
S/G/Y/R/B/O NT_008476AL354861857756743  AC011845161419031115140172614116162778
S/G/Y/R/B/O NT_008476AL161454859582273chr9NT_008476AL1591678610076332000002000
S/G/Y/R/B/O NT_008476AL161454859582273  AC06198013552283129244300241544974717
S/G/Y/R/B/O NT_008476AL159167861007633chr9NT_008476AL4494038617366612000002000
S/G/Y/R/B/O NT_008476AL159167861007633  AC0619808577567411226121394839942054
S/G/Y/R/B/O NT_008476AL449403861736661chr9NT_008476AL1387548634558232000002000
S/G/Y/R/B/O NT_008476AL138754863455823chr9NT_008476AL1602698634966730199801998
S/G/Y/R/B/O NT_008476AL160269863496673chr9NT_008476AL13347786517311300100100
S/G/Y/R/B/O NT_008476AL133477865173113chr9NT_008476AL3535788665632932000002000
S/G/Y/R/B/O NT_008476AL353578866563293chr9NT_008476AL5898438679109432000002000
S/G/Y/R/B/O NT_008476AL589843867910943chr9NT_008476AL4511228693172130000
S/G/Y/R/B/O NT_008476AL451122869317213chr9NT_008476AL1616298696999930000
S/G/Y/R/B/O NT_008476AL451122869317213  AC015889866563291382000038200
S/G/Y/R/B/O NT_008476AL161629869699993chr9NT_008476AL35364987128340300100100
S/G/Y/R/B/O NT_008476AL161629869699993  AC009900866563291383690038369
S/G/Y/R/B/O NT_008476AL161629869699993  AC01588918447638113017028020132972
S/G/Y/R/B/O NT_008476AL353649871283403chr9NT_008476AL3898888719303130000
S/G/Y/R/B/O NT_008476AL353649871283403  AC009900871283401647730064773
S/G/Y/R/B/O NT_008476AL389888871930313chr9NT_008476AL1616328739580530000
S/G/Y/R/B/O NT_008476AL389888871930313  AC009900869699991581270058127
S/G/Y/R/B/O NT_008476AL161632873958053chr9NT_008476AL3548538739910430000
S/G/Y/R/B/O NT_008476AL354853873991043chr9NT_008476AL3536198757542630000
S/G/Y/R/B/O NT_008476AL354853873991043  AC00978786969999112676726020129369
S/G/Y/R/B/O NT_008476AL354853873991043  AC021583869699992950370095037
S/G/Y/R/B/O NT_008476AL353619875754263chr9NT_008476AL4460248771672530000
S/G/Y/R/B/O NT_008476AL353619875754263  AC02158286969999211923700119237
S/G/Y/R/B/O NT_008476AL353619875754263  AC02158386969999210009800100098
S/G/Y/R/B/O NT_008476AL446024877167253chr9NT_008476AL3548628776812820000
S/G/Y/R/B/O NT_008476AL446024877167253  AC021582869699992534030053403
S/G/Y/R/B/O NT_008476AL354862877681282chr9NT_008476AL1625858792008130192401924
S/G/Y/R/B/O NT_008476AL354862877681282chr9NT_033202AC021580816281643116710011671
S/G/Y/R/B/O NT_008476AL354862877681282  AC01061286969999311105600111056
S/G/Y/R/B/O NT_008476AL354862877681282  AC02158181628164314834600148346
S/G/Y/R/B/O NT_008476AL354862877681282  AC021582816281642305550030555
S/G/Y/R/B/O NT_008476AL162585879200813chr9NT_008476AL3556078796212230000
S/G/Y/R/B/O NT_008476AL162585879200813chr9NT_033202AC021580816281643438900043890
S/G/Y/R/B/O NT_008476AL355607879621223chr9NT_008476AL1580718807343020000
S/G/Y/R/B/O NT_008476AL355607879621223chr9NT_033202AC02158081628164311311100113111
S/G/Y/R/B/O NT_008476AL158071880734302chr9NT_008476AL5133538825305332000002000
S/G/Y/R/B/O NT_008476AL158071880734302chr9NT_033202AC021580816281643474990047499
S/G/Y/R/B/O NT_008476AL513353882530533chr9NT_008476AL3536458835627830199901999
S/G/Y/R/B/O NT_008476AL353645883562783chr9NT_008476AL3537648838574120000
S/G/Y/R/B/O NT_008476AL353764883857412chr9NT_008476AL1599998855463930000
S/G/Y/R/B/O NT_008476AL353764883857412chr9NT_008476AC016177887195571131701488421112157697
S/G/Y/R/B/O NT_008476AL353764883857412  AL359391887195571184580018458
S/G/Y/R/B/O NT_008476AL159999885546393chr9NT_008476AL5912148865449832000002000
S/G/Y/R/B/O NT_008476AL159999885546393  AL3593918871955717226501421586480
S/G/Y/R/B/O NT_008476AL591214886544983chr9NT_008476AC0161778871955710000
S/G/Y/R/B/O NT_008476AL591214886544983  AL359391885546391436395698837957716
S/G/Y/R/B/O NT_008476AC016177887195571         
S/G/Y/R/B/O NT_008476AC016177887195571chr9NT_008476AL353764883857412131701488421112157697