Fish Genomes assembly hubs, assembly statistics

Assemblies from NCBI/Genbank/Refseq sources, subset of fish only.

See also: hub accesstrack statistics


Data resource links

NOTE: Click on the column headers to sort the table by that column
The link to genome browser will attach only that single assembly to the genome browser.
count common name
link to genome browser
scientific name
and data download
NCBI assembly sequence
count
genome size
nucleotides
gap
count
unknown bases
(gap size sum)
masking
percent
1 Acadian redfish (alternate hap 2024) Sebastes fasciatus GCA_043250585.1_fSebFas1.alt 11,377 834,216,046 0 0 45.07
2 Acadian redfish (fSebFas1 primary hap 2024 refseq) Sebastes fasciatus GCF_043250625.1_fSebFas1.pri 204 833,851,473 472 84,201 37.07
3 alewife (anadromous, Long Island Sound Yale_2024_CS 2024) Alosa pseudoharengus GCF_046254945.1_YU_APseudo_1.1 329 1,050,070,452 1,061 207,652 52.49
4 alligator pipefish (LvHL_M 2021) Syngnathoides biaculeatus GCF_019802595.1_ASM1980259v1 143 636,535,704 144 14,400 38.03
5 allis shad Alosa alosa GCF_017589495.1_AALO_Geno_1.1 1,095 854,464,681 1,541 767,536 38.87
6 Amazon molly Poecilia formosa GCF_000485575.1_Poecilia_formosa-5.1.2 3,985 748,923,461 36,429 34,735,552 26.04
7 amberjack S.aureovittata (China HTS-2021-v1 2021) Seriola aureovittata GCF_021018895.1_ASM2101889v1 31 647,095,223 150 75,500 26.68
8 American shad (fAloSap1 alternate hap 2021) Alosa sapidissima GCA_018492705.1_fAloSap1.alt 5,410 852,425,339 1 20 38.65
9 American shad (primary hap 2021 genbank) Alosa sapidissima GCA_018492685.1_fAloSap1.pri 73 903,564,947 1,639 4,995,812 47.70
10 American shad (primary hap 2021 refseq) Alosa sapidissima GCF_018492685.1_fAloSap1.pri 74 903,581,644 1,639 4,995,812 39.49
11 Andean cavefish (hap1 2023 genbank) Trichomycterus rosablanca GCA_030014385.1_fTriRos1.hap1 349 1,045,025,885 198 39,600 49.04
12 Andean cavefish (hap1 2023 refseq) Trichomycterus rosablanca GCF_030014385.1_fTriRos1.hap1 349 1,045,025,885 198 39,600 49.04
13 annual killifish Austrofundulus limnaeus GCF_001266775.1_Austrofundulus_limnaeus-1.0 29,784 866,963,076 1,025,519 172,836,531 28.75
14 annular seabream (2025) Diplodus annularis GCA_977110885.1_fDipAnn1.1 28 780,857,085 23 2,700 30.67
15 Antarctic jonasfish (primary hap 2024) Notolepis coatsorum GCA_963971535.1_fNotCoa1.1 5,983 3,427,809,033 15,113 3,020,567 68.42
16 Antarctic lanternfish (alternate hap 2023) Electrona antarctica GCA_951214905.1_fEleAnt2.1_alternate_haplotype 11,436 1,301,265,211 0 0 47.62
17 Antarctic lanternfish (primary hap 2023 genbank) Electrona antarctica GCA_951216825.1_fEleAnt2.1 1,901 1,427,445,741 3,179 635,800 52.88
18 Antarctic lanternfish (primary hap 2023 refseq) Electrona antarctica GCF_951216825.1_fEleAnt2.1 1,901 1,427,445,741 3,179 635,800 59.83
19 Antarctic spiny plunderfish (primary hap 2020) Harpagifer antarcticus GCA_902827135.1_fHarAnt1.1 1,541 941,503,312 1,039 113,043 43.03
20 Arctic char (2024) Salvelinus alpinus GCF_045679555.1_SLU_Salpinus.1 939 2,367,887,750 3,854 385,400 56.53
21 Arctic char (CBP00131 primary hap 2024) Salvelinus alpinus oquassa GCA_036784965.1_fSalAlp2_p1.0 1,169 2,129,031,653 3,235 647,000 58.15
22 Arctic char (hap1 2025) Salvelinus alpinus GCA_054100595.1_fSalAlp3.hap1 1,443 2,264,666,818 4,441 888,200 56.53
23 Arctic char (hap2 2025) Salvelinus alpinus GCA_054100575.1_fSalAlp3.hap2 1,796 2,008,814,543 4,287 857,400 55.57
24 Arctic char (IW2-2015 2018) Salvelinus sp. IW2-2015 GCF_002910315.2_ASM291031v2 15,253 2,169,549,916 1,718,015 148,387,905 44.87
25 Aristotle's catfish (alternate hap 2022) Silurus aristotelis GCA_946807865.1_fSilAri3.1_alternate_haplotype 7,617 713,076,206 0 0 40.74
26 Aristotle's catfish (primary hap 2022 genbank) Silurus aristotelis GCA_946808225.1_fSilAri3.1 241 800,118,513 795 159,000 42.15
27 Aristotle's catfish (primary hap 2022 refseq) Silurus aristotelis GCF_946808225.1_fSilAri3.1 241 800,118,513 795 159,000 44.14
28 Arkansas darter Etheostoma cragini GCF_013103735.1_CSU_Ecrag_1.0 4,664 643,078,674 35,052 3,314,141 26.64
29 arrowtail (hap1 2026) Melanonus zugmayeri GCA_057876845.1_fMelZyg2.hap1 2,987 735,065,728 1,365 269,000 41.49
30 arrowtail (hap2 2026) Melanonus zugmayeri GCA_057877015.1_fMelZyg2.hap2 1,559 742,016,821 1,366 270,100 43.05
31 arroyo chub (AC-1 alternate hap 2022) Gila orcuttii GCA_026230005.1_fGilOrc1.0.hap1 179 1,263,410,250 327 32,700 50.53
32 arroyo chub (AC-1 primary hap 2022) Gila orcuttii GCA_026230025.1_fGilOrc1.0.hap2 341 1,272,848,069 318 31,800 50.58
33 Asian bonytongue (2019) Scleropages formosus GCF_900964775.1_fSclFor1.1 72 784,563,014 145 41,360 26.53
34 Asian bonytongue (alternate hap) Scleropages formosus GCA_900964985.2_fSclFor1.1_alternate_haplotype 2,006 751,313,211 1 25 26.29
35 Asian redtail catfish (EC202008001 2021) Hemibagrus wyckioides GCF_019097595.1_SWU_Hwy_1.0 73 789,816,092 107 10,700 37.39
36 Atlantic bluefin tuna (alternate hap 2024) Thunnus thynnus GCA_963924655.1_fThuThy2.1_alternate_haplotype 3,713 806,472,619 2 400 33.61
37 Atlantic bluefin tuna (primary hap 2024 genbank) Thunnus thynnus GCA_963924715.1_fThuThy2.1 120 799,063,593 468 93,600 33.12
38 Atlantic bluefin tuna (primary hap 2024 refseq) Thunnus thynnus GCF_963924715.1_fThuThy2.1 119 799,047,066 468 93,600 33.12
39 Atlantic cod (2019) Gadus morhua GCF_902167405.1_gadMor3.0 227 669,966,409 1,216 23,573,743 33.47
40 Atlantic cod (alternate hap) Gadus morhua GCA_902167395.1_gadMor3.0_alternate_haplotype 3,592 584,119,146 3 75 33.87
41 Atlantic halibut (2019 refseq) Hippoglossus hippoglossus GCF_009819705.1_fHipHip1.pri 57 596,792,615 290 3,413,390 24.17
42 Atlantic halibut (alternate hap 2019) Hippoglossus hippoglossus GCA_009819745.1_fHipHip1.alt 4,053 676,690,381 62 3,468 24.50
43 Atlantic herring (v2) Clupea harengus GCF_900700415.2_Ch_v2.0.2 1,724 786,325,606 1,990 870,691 32.57
44 Atlantic horse mackerel (alternate hap 2021) Trachurus trachurus GCA_905171655.2_fTraTra1.2_alternate_haplotype 1,049 797,027,743 74 4,927 32.73
45 Atlantic horse mackerel (primary hap 2021 genbank) Trachurus trachurus GCA_905171665.2_fTraTra1.2 153 801,243,942 222 29,162 32.85
46 Atlantic horse mackerel (primary hap 2021 reference) Trachurus trachurus GCF_905171665.1_fTraTra1.2 152 801,227,381 222 29,162 37.07
47 Atlantic mackerel (alternate hap 2023) Scomber scombrus GCA_963691945.1_fScoSco1.1_alternate_haplotype 4,905 731,363,837 12 2,400 28.33
48 Atlantic mackerel (primary hap 2023 genbank) Scomber scombrus GCA_963691925.1_fScoSco1.1 666 764,157,853 1,489 297,822 29.96
49 Atlantic mackerel (primary hap 2023 refseq) Scomber scombrus GCF_963691925.1_fScoSco1.1 665 764,141,294 1,489 297,822 29.96
50 Atlantic salmon (2025) Salmo salar GCF_965601325.1_fSalSal1 509 2,825,058,374 11 1,100 61.35
51 Atlantic salmon (refseq 2021) Salmo salar GCF_905237065.1_Ssal_v3.1 4,011 2,756,584,103 211 21,100 59.39
52 Atlantic salmon (Sally 2015) Salmo salar GCF_000233375.1_ICSASG_v2 232,152 2,966,861,068 138,207 348,002,350 51.87
53 Atlantic silverside (fMenMen1 hap1 2025) Menidia menidia GCA_048628825.1_ASM4862882v1 457 571,276,089 867 86,700 28.90
54 Atlantic silverside (fMenMen1 hap2 2025) Menidia menidia GCA_048544195.1_ASM4854419v1 567 553,547,304 804 80,400 28.19
55 Atlantic turbot (AOZZmale01 2020) Scophthalmus maximus GCF_013347765.1_ASM1334776v1 127 556,696,898 51 2,160 25.82
56 Australian ruff (RE-2024a hap1 2024) Arripis georgiana GCA_042242115.1_fArrGeo1.hap1 625 735,099,811 91 18,000 33.44
57 Australian ruff (RE-2024a hap2 2024) Arripis georgiana GCA_042242135.1_fArrGeo1.hap2 552 801,586,327 98 19,400 38.19
58 axillary wrasse (2026) Symphodus mediterraneus GCA_980914855.1_fSymMed1.1 224 653,105,232 1,051 115,000 30.48
59 baldchin grouper (hap1 2026) Choerodon rubescens GCA_056506755.1_fChoRub1.hap1 156 863,113,419 94 18,800 33.10
60 ballan wrasse (2016) Labrus bergylta GCF_900080235.1_BallGen_V1 13,466 805,480,521 257 137,791 30.40
61 ballan wrasse (alternate hap 2024) Labrus bergylta GCA_963930765.1_fLabBer1.1_alternate_haplotype 2,798 695,444,047 6 1,200 29.65
62 ballan wrasse (primary hap 2024 genbank) Labrus bergylta GCA_963930695.1_fLabBer1.1 132 720,227,340 815 163,000 30.38
63 ballan wrasse (primary hap 2024 refseq) Labrus bergylta GCF_963930695.1_fLabBer1.1 131 720,210,020 815 163,000 30.38
64 banded archerfish (alternate hap 2021) Toxotes jaculatrix GCA_017976295.1_fToxJac2.alt 2,393 594,660,453 2 26 26.52
65 banded archerfish (primary hap 2021 refseq) Toxotes jaculatrix GCF_017976425.1_fToxJac2.pri 96 621,503,431 98 1,137,472 28.10
66 banded electric knifefish (BG-103 2025) Brachyhypopomus gauderio GCF_052324685.1_BGAUD_0.2 840 796,923,666 810 401,750 36.45
67 banded killifish (hap1 2024) Fundulus diaphanus GCA_037039145.1_fFunDia1.hap1 331 1,351,828,608 293 3,461,740 50.48
68 banded killifish (hap2 2024) Fundulus diaphanus GCA_037038625.1_fFunDia1.hap2 196 1,329,922,595 373 6,322,172 50.37
69 barbel (alternate hap 2022) Barbus barbus GCA_936446605.1_fBarBab1.1_alternate_haplotype 8,034 1,319,370,800 1 200 52.21
70 barbel (primary hap 2021) Barbus barbus GCF_936440315.1_fBarBab1.1 91 1,584,913,304 108 21,600 47.31
71 barbel (primary hap 2022) Barbus barbus GCA_936440315.1_fBarBab1.1 92 1,584,929,904 108 21,600 52.50
72 barramundi perch (ASB-BC8 2022) Lates calcarifer GCF_001640805.2_TLL_Latcal_v3 2,997 673,814,222 674 7,539,228 23.61
73 bay pipefish (2026) Syngnathus leptorhynchus GCF_054491065.1_UIUO_Slep 783 400,874,984 19 404 43.67
74 beardfish (hap1 2025) Polymixia lowei GCA_047511565.1_fPolLow2.hap1 327 675,344,950 752 150,427 30.33
75 beardfish (hap2 2025) Polymixia lowei GCA_047511595.1_fPolLow2.hap2 199 671,709,512 756 151,025 30.40
76 Bermuda beardfish (OG660 hap1 2025) Polymixia cf. hollisterae GCA_048537225.1_ASM4853722v1 846 722,757,191 481 94,400 32.95
77 Bermuda beardfish (OG660 hap2 2025) Polymixia cf. hollisterae GCA_048537235.1_ASM4853723v1 461 707,857,291 508 100,200 32.19
78 bicolor damselfish Stegastes partitus GCF_000690725.1_Stegastes_partitus-1.0.2 5,817 800,485,922 44,409 50,762,588 23.44
79 big-scale sand smelt (2026) Atherina boyeri GCA_978019495.1_fAthBoy1.1 82 993,398,016 128 14,900 37.59
80 bigeye tuna (Bigeye Tuna-1 2026) Thunnus obesus GCA_057929075.1_ASM5792907v1 24 839,276,673 2 700 36.49
81 bigeye tuna (hap1 2026) Thunnus obesus GCA_984655505.1_Thunnus_obesus_haplotype_1_assembly 171 806,794,700 74 14,700 36.56
82 bigeye tuna (hap2 2026) Thunnus obesus GCA_984747685.1_Thunnus_obesus_haplotype_2_assembly 64 803,101,909 57 11,200 36.44
83 bight redfish (2022) Centroberyx gerrardi GCF_026898505.1_AGI_CSIRO_Cger_v1 8,310 735,610,683 0 0 29.23
84 bight redfish (hap1 2025 genbank) Centroberyx gerrardi GCA_048128805.1_fCenGer3.hap1.cur.20231027 279 779,177,424 699 139,800 31.86
85 bight redfish (hap1 2025 refseq) Centroberyx gerrardi GCF_048128805.1_fCenGer3.hap1.cur.20231027 279 779,177,424 699 139,800 46.11
86 bight redfish (hap2 2025) Centroberyx gerrardi GCA_048129085.1_fCenGer3.hap2.cur.20231027 204 774,057,239 680 136,000 32.03
87 black goby (alternate hap 2023) Gobius niger GCA_951799965.1_fGobNig1.1_alternate_haplotype 3,523 838,316,121 0 0 45.69
88 black goby (primary hap 2023 genbank) Gobius niger GCA_951799975.1_fGobNig1.1 298 870,572,126 636 127,200 40.54
89 black goby (primary hap 2023 refseq) Gobius niger GCF_951799975.1_fGobNig1.1 298 870,572,126 636 127,200 48.53
90 black perch (LCO1_2020_lvr alternate hap 2022) Embiotoca jacksoni GCA_022578405.1_fEmbJac1.0.a 62,783 1,686,865,087 639 63,900 26.96
91 black perch (LCO1_2020_lvr primary hap 2022 refseq) Embiotoca jacksoni GCF_022577435.1_fEmbJac1.0.p 229 634,668,633 234 23,401 28.99
92 black porgy (SG-2024 2024) Acanthopagrus schlegelii GCA_041753875.1_ASM4175387v1 24 714,975,658 0 0 24.10
93 black rockcod Notothenia coriiceps GCF_000735185.1_NC01 38,657 636,613,682 59,164 13,288,261 29.51
94 black scorpionfish (2026) Scorpaena porcus GCA_984586865.1_fScoPor1.1 39 1,169,944,165 18 2,900 45.85
95 black seabass (Rhode Island RG_2023a 2023) Centropristis striata GCF_030273125.1_C.striata_1.0 92 926,021,963 341 33,027 38.92
96 black seabream (2025) Spondyliosoma cantharus GCA_965243705.1_fSpoCan1.1 59 794,918,341 99 10,100 35.70
97 black-face blenny T.delaisi (2025) Tripterygion delaisi GCA_965643125.1_fTriDel1.1 40 772,807,839 8 800 32.12
98 blackbar soldierfish (2026) Myripristis jacobus GCA_977872305.1_fMyrJac1.1 63 793,064,773 74 8,900 35.15
99 blackbelly eelpout (fLycPai1 haplotype 1 2023) Lycodopsis pacificus GCA_028021495.1_fLycPai1.hap1 461 661,271,547 373 74,600 30.40
100 blackbelly eelpout (fLycPai1 haplotype 2 2023) Lycodopsis pacificus GCA_028022725.1_fLycPai1.hap2 109 646,369,862 366 73,200 29.94
101 blackbelly rosefish (2026) Helicolenus dactylopterus GCA_981148845.1_fHelDac2.1 212 811,380,064 86 9,000 45.52
102 blackear wrasse (2025) Halichoeres poeyi GCA_965645315.1_fHalPoe1.1 30 785,400,893 12 1,300 32.88
103 blackfin blenny (2026) Paraclinus nigripinnis GCA_984586885.1_fParNin1.1 101 564,641,503 37 5,300 30.14
104 blackfin cardinalfish (2025) Astrapogon puncticulatus GCA_977014485.1_fAstPun1.1 36 770,648,391 205 25,700 30.84
105 blackspot seabream (2026) Pagellus bogaraveo GCA_979666705.1_fPagBog1.1 65 849,849,803 98 10,300 38.33
106 blackspot tuskfish (SL-2024 2025) Choerodon schoenleinii GCA_047301625.1_ASM4730162v1 43 865,958,939 11 1,100 30.05
107 blackstripe livebearer (line A6 2022) Poeciliopsis prolifica GCF_027474105.1_Auburn_PproV2 415 674,152,735 89 44,933 28.58
108 blacktail shiner (hap1 2024) Cyprinella venusta GCA_038021265.1_fCypVen1.hap1 673 918,162,819 709 131,200 46.85
109 blacktail shiner (hap2 2024) Cyprinella venusta GCA_038024135.1_fCypVen1.hap2 413 928,717,837 720 134,500 47.57
110 blotched picarel (2026) Spicara maena GCA_978045295.1_fSpiMae1.1 35 770,867,518 96 11,200 34.93
111 blue catfish (D&B 2022) Ictalurus furcatus GCF_023375685.1_Billie_1.0 43 825,475,682 171 16,147,546 44.46
112 blue runner (2026) Caranx crysos GCA_984588375.1_fCarCry1.1 78 578,101,140 203 20,800 23.34
113 blue tang surgeonfish (2025) Acanthurus coeruleus GCA_977062895.1_fAcaCoe1.1 37 660,715,304 6 1,000 32.17
114 blue tilapia (BGI-SZ) Oreochromis aureus GCF_005870065.1_ASM587006v1 12,952 918,953,803 53,539 93,301,056 23.12
115 blue tilapia (Guangdong) Oreochromis aureus GCF_013358895.1_ZZ_aureus 304 1,005,575,223 723 285,885 32.10
116 blue whiting (alternate hap 2024) Micromesistius poutassou GCA_964030755.1_fMicPou1.1_alternate_haplotype 9,837 982,817,647 3,916 783,200 37.87
117 blue whiting (primary hap 2024 genbank) Micromesistius poutassou GCA_964030765.1_fMicPou1.1 3,832 520,636,573 3,055 611,000 35.17
118 blue whiting (primary hap 2024 refseq) Micromesistius poutassou GCF_964030765.1_fMicPou1.1 3,831 520,620,001 3,055 611,000 35.18
119 bluehead (hap1 2025) Thalassoma bifasciatum GCA_054084025.1_fThaBif1.hap1 52 785,161,433 111 22,200 35.79
120 bluehead (hap2 2025) Thalassoma bifasciatum GCA_054084055.1_fThaBif1.hap2 60 774,616,897 85 17,000 34.96
121 bluespotted cornetfish (2026) Fistularia commersonii GCF_037954325.1_RoL_Fcom_v1.0 184 678,533,898 42 840 36.47
122 bluestreak cleaner wrasse (JK-2023 2023) Labroides dimidiatus GCA_030710495.1_ASM3071049v1 57 726,375,676 211 20,176 30.23
123 bluestripe pipefish (RoL-2023G 2024) Doryrhamphus excisus GCF_037039965.1_RoL_Dexc_Guam_v1.1 50 497,388,357 5 100 40.51
124 bluestripe pipefish (RoL2022-K1 2023) Doryrhamphus excisus GCF_030265055.1_RoL_Dexc_1.0 57 519,378,276 12 240 41.17
125 blunt-snouted clingfish (alternate hap) Gouania willdenowi GCA_900650505.1_fGouWil2.1_alternate_haplotype 7,674 759,272,921 1 31 42.46
126 blunt-snouted clingfish (primary hap 2020) Gouania willdenowi GCF_900634775.2_fGouWil2.2 441 937,150,793 1,160 14,353,515 53.43
127 blunt-snouted clingfish (v2 2020 genbank) Gouania willdenowi GCA_900634775.2_fGouWil2.2 442 937,169,869 1,160 14,353,515 42.93
128 Boeseman's rainbowfish (fMelBoe1 alternate hap 2021) Melanotaenia boesemani GCA_017639755.1_fMelBoe1.alt 3,194 764,404,102 45 60,336 28.42
129 Boeseman's rainbowfish (primary hap 2021 genbank) Melanotaenia boesemani GCA_017639745.1_fMelBoe1.pri 93 865,592,505 440 3,217,901 40.02
130 Boeseman's rainbowfish (primary hap 2021 refseq) Melanotaenia boesemani GCF_017639745.1_fMelBoe1.pri 93 865,592,457 440 3,217,901 29.18
131 Bolin's lanternfish (primary hap 2024 genbank) Protomyctophum bolini GCA_963924005.1_fProBol1.1 951 1,148,224,649 1,785 357,000 47.04
132 Bolin's lanternfish (primary hap 2024 refseq) Protomyctophum bolini GCF_963924005.1_fProBol1.1 951 1,148,224,649 1,785 357,000 55.48
133 bonti-bonti (fTelBon1 alternate hap 2022) Telmatherina bonti GCA_933228925.1_fTelBon1.1_alternate_haplotype 4,619 781,234,592 0 0 38.85
134 bonti-bonti (primary hap 2022) Telmatherina bonti GCA_933228915.1_fTelBon1.1 146 986,039,709 1,329 265,800 40.16
135 bony fish Bassozetus sp. 2 (HX-2024 2025) Bassozetus sp. 2 HX-2024 GCA_048564805.1_ASM4856480v1 143 680,788,385 304 60,623 29.93
136 Borax Lake chub (OS27281-9 2025) Siphateles boraxobius GCF_051911475.1_OSU_SipBor_1 532 1,238,650,365 0 0 66.74
137 bowfin (hap1 2024 refseq) Amia calva GCF_036373705.1_fAmiCal2.hap1 389 989,103,751 97 19,400 37.74
138 bowfin (hap2 2024) Amia calva GCA_036365475.1_fAmiCal2.hap2 297 958,875,937 80 16,000 36.24
139 Brauer's lanternfish (alternate hap 2023) Gymnoscopelus braueri GCA_963281105.1_fGymBra2.1_alternate_haplotype 10,794 1,279,160,753 5 1,000 46.07
140 Brauer's lanternfish (primary hap 2023 genbank) Gymnoscopelus braueri GCA_963280865.1_fGymBra2.1 676 1,367,984,568 2,704 540,800 49.78
141 Brauer's lanternfish (primary hap 2023 refseq) Gymnoscopelus braueri GCF_963280865.1_fGymBra2.1 676 1,367,984,568 2,704 540,800 59.33
142 brilliant pomfret (hap1 2026) Eumegistus illustris GCA_984747365.1_Eumegistus_illustris_haplotype_1_assembly 1,011 951,620,839 373 73,700 34.70
143 brilliant pomfret (hap2 2026) Eumegistus illustris GCA_984747395.1_Eumegistus_illustris_haplotype_2_assembly 478 891,025,178 374 73,900 34.49
144 broad-nosed pipefish (SK-2024d hap1 2025) Syngnathus typhle GCA_048301445.1_SynTyp1_v1.hap1 152 368,300,239 78 7,800 36.58
145 broad-nosed pipefish (SK-2024d hap2 2025) Syngnathus typhle GCA_048301605.1_SynTyp1_v1.hap2 125 356,339,685 90 9,000 34.73
146 broad-nosed pipefish (Sweden RoL2023-S1 2023) Syngnathus typhle GCF_033458585.1_RoL_Styp_1.0 495 435,284,570 40 800 43.83
147 broadstripe goby (2026) Elacatinus prochilos GCA_984808015.1_fElaPro1.1 494 953,763,457 478 59,000 39.24
148 brook trout (EN_2023a 2023) Salvelinus fontinalis GCF_029448725.1_ASM2944872v1 2,721 2,496,185,110 4,299 4,308,856 57.12
149 brown trout (2021) Salmo trutta GCF_901001165.2_fSalTru1.2 1,440 2,371,863,509 3,941 73,600,705 61.29
150 brown-marbled grouper (2020) Epinephelus fuscoguttatus GCF_011397635.1_E.fuscoguttatus.final_Chr_v1 26 1,047,012,452 205 20,500 31.35
151 brownstripe red snapper (3 fLutVit1fLutVit1.hap1.cur.20230825 2026) Lutjanus vitta GCA_059550215.1_fLutVit1.hap1.cur.20230825 326 999,730,650 98 18,900 30.49
152 brownstripe red snapper (3 fLutVit1fLutVit1.hap2.cur.20230825 2026) Lutjanus vitta GCA_059550225.1_fLutVit1.hap2.cur.20230825 296 1,002,245,598 95 18,200 31.00
153 Burton's mouthbrooder (Broad 2011) Haplochromis burtoni GCF_000239415.1_AstBur1.0 7,994 831,398,301 61,073 132,461,904 20.26
154 Burton's mouthbrooder (fHapBur1hap1 2026) Haplochromis burtoni GCA_054824465.1_fHapBur1.hap1 210 902,372,047 182 36,400 32.56
155 Burton's mouthbrooder (fHapBur1hap2 2026) Haplochromis burtoni GCA_054824495.1_fHapBur1.hap2 217 881,399,146 211 42,200 32.20
156 Burton's mouthbrooder (NCSU 2021) Haplochromis burtoni GCF_018398535.1_NCSU_Asbu1 7,421 854,588,855 32,418 93,726,465 23.62
157 butterfish (fScaArg1 alternate hap 2021) Scatophagus argus GCA_020382915.1_fScaArg1.alt 1,592 563,244,951 4 52 21.38
158 butterfish (primary hap 2021) Scatophagus argus GCF_020382885.2_fScaArg1.pri 48 570,802,272 77 1,711,559 21.27
159 butterfly blenny (alternate hap 2023) Blennius ocellaris GCA_963422475.1_fBleOce1.1_alternate_haplotype 5,820 675,648,630 0 0 30.34
160 butterfly blenny (primary hap 2023 genbank) Blennius ocellaris GCA_963422515.1_fBleOce1.1 525 728,745,255 1,625 325,000 32.58
161 butterfly blenny (primary hap 2023 refseq) Blennius ocellaris GCF_963422515.1_fBleOce1.1 525 728,745,255 1,625 325,000 32.58
162 C.zebra (hap1 2026) Characidium zebra GCA_059491945.1_fChaZeb2.hap1 288 1,223,360,114 348 65,900 47.10
163 C.zebra (hap2 2026) Characidium zebra GCA_059491955.1_fChaZeb2.hap2 173 1,201,169,872 344 66,125 46.44
164 California grunion (hap1 2024) Leuresthes tenuis GCF_036924035.1_fLeuTen1.0.hap1 296 917,115,632 223 22,300 39.82
165 California sheephead (SPU_LCO1_2020_fin alternate hap 2022) Semicossyphus pulcher GCA_022749735.1_fSemPul1.0.a 13,198 1,095,728,264 2,679 267,900 32.04
166 California sheephead (SPU_LCO1_2020_fin primary hap 2022) Semicossyphus pulcher GCA_022749685.1_fSemPul1.0.p 179 794,122,974 8 807 31.94
167 California sheephead S.pulcher (SPU_LCO1_2020_fin primary hap 2022) Semicossyphus pulcher GCF_022749685.1_fSemPul1.0.p 178 794,106,426 8 807 31.94
168 California slickhead (hap1 2026) Alepocephalus tenebrosus GCA_056824585.1_fAleTen1.hap1 1,502 2,099,819,200 5,964 1,192,800 52.99
169 cardinalfish (2024) Apogon imberbis GCA_964211915.2_fApoImb1.1 33 819,133,141 5 800 32.48
170 channel bull blenny (2019 refseq) Cottoperca gobio GCF_900634415.1_fCotGob3.1 322 609,391,784 445 2,553,975 28.72
171 channel bull blenny (alternate hap 2019) Cottoperca gobio GCA_900634435.1_fCotGob3.1_alternate_haplotype 11,555 671,265,480 10 925 26.88
172 channel catfish (USDA103 2022) Ictalurus punctatus GCA_001660625.3_Coco_2.0 136 842,926,452 100 5,510,128 46.77
173 channel catfish (USDA103 v2.0 2022) Ictalurus punctatus GCF_001660625.3_Coco_2.0 137 842,942,949 100 5,510,128 46.73
174 cherry salmon (Uvic2021 2024) Oncorhynchus masou masou GCF_036934945.1_UVic_Omas_1.1 17,263 2,664,802,492 4,047 1,594,659 55.66
175 chevron butterflyfish (hap1 2024 refseq) Chaetodon trifascialis GCF_039877785.1_fChaTrf1.hap1 36 662,489,023 49 9,600 24.65
176 chevron butterflyfish (hap2 2024) Chaetodon trifascialis GCA_039877575.1_fChaTrf1.hap2 71 664,933,391 43 8,500 24.11
177 chichlid (S. diagramma) Simochromis diagramma GCF_900408965.1_fSimDia1.1 823 848,827,444 942 39,011 29.00
178 Chinaman-leatherjacket (Tasmania G7.1 2024) Nelusetta ayraudi GCF_046127955.1_CSIRO-AGI_Nayr_v1 396 576,472,122 0 0 37.76
179 chinamanfish (hap1 OG11 2025) Symphorus nematophorus GCA_048128725.1_fSymNem1.1_haplotype_1 86 1,079,363,760 70 13,300 32.88
180 chinamanfish (hap2 OG11 2025) Symphorus nematophorus GCA_048128715.1_fSymNem1.1_haplotype_2 60 1,079,709,985 72 13,200 33.07
181 Chinese cavefish (2022) Triplophysa rosa GCF_024868665.1_Trosa_1v2 1,039 684,821,613 9,510 9,903,649 43.83
182 Chinese large-mouth catfish (SWU-2019-XX 2020) Silurus meridionalis GCF_014805685.1_ASM1480568v1 286 742,596,447 597 1,345,608 37.56
183 Chinese longsnout catfish (HL-2024 2024) Leiocassis longirostris GCA_041146805.1_ASM4114680v1 174 695,900,828 425 23,768 36.97
184 Chinese rare minnow G.rarus (2020-XYJJ_v1 2022) Gobiocypris rarus GCA_023029165.1_ASM2302916v1 46 1,134,099,513 410 234,841 60.67
185 Chinese sucker (Aquarium Trade MX2 2022) Myxocyprinus asiaticus GCF_019703515.2_UBuf_Myxa_2 353 2,340,864,798 224 112,000 59.93
186 Chinese trumpetfish (2026) Aulostomus chinensis GCF_037954235.1_RoL_Achi_v1.0 169 743,153,966 54 1,080 32.17
187 Chinook salmon (v1 2018 female) Oncorhynchus tshawytscha GCF_002872995.1_Otsh_v1.0 14,028 2,425,709,133 272,151 66,933,393 47.70
188 Chinook salmon (v2 Ot180627B 2021 male rfseq) Oncorhynchus tshawytscha GCF_018296145.1_Otsh_v2.0 7,665 2,294,859,190 2,334 231,729 54.65
189 chub mackerel (fScoJap1 alternate hap 2022) Scomber japonicus GCA_027409835.1_fScoJap1.alt 2,162 783,090,595 1 39 30.75
190 chub mackerel (primary hap 2022 refseq) Scomber japonicus GCF_027409825.1_fScoJap1.pri 360 828,681,152 1,572 647,100 32.44
191 chum salmon (Oke142-1_Chum_Gynogen 2020) Oncorhynchus keta GCF_012931545.1_Oket_V1 25,265 1,853,104,330 242,238 86,386,492 46.35
192 chum salmon (PuntledgeMale-10-30-2019 2022) Oncorhynchus keta GCF_023373465.1_Oket_V2 14,075 2,556,477,726 3,433 341,979 55.78
193 climbing perch (alternate hap 2019) Anabas testudineus GCA_900650485.1_fAnaTes1.2_alternate_haplotype 2,641 539,091,056 36 2,107,526 21.00
194 climbing perch (primary hap 2021) Anabas testudineus GCF_900324465.3_fAnaTes1.3 51 555,658,001 266 3,606,496 21.33
195 climbing perch (v1.3 2021) Anabas testudineus GCA_900324465.3_fAnaTes1.3 51 555,658,509 266 3,606,496 21.33
196 clown anemonefish (DU_AmpOce 2017) Amphiprion ocellaris GCF_002776465.1_AmpOce1.0 6,405 880,720,895 1,406 545,178 32.00
197 clown anemonefish (Okinawa individual 3 2022) Amphiprion ocellaris GCF_022539595.1_ASM2253959v1 354 863,484,803 1,454 136,641 35.40
198 coho salmon (150728-3 2019) Oncorhynchus kisutch GCF_002021735.2_Okis_V2 4,087 2,375,911,593 5,631 469,357 54.83
199 comb jelly S.cabrilla (2025) Serranus cabrilla GCA_965643205.1_fSerCab1.1 220 735,069,690 3 600 33.52
200 common bream (alternate hap 2024) Abramis brama GCA_963993125.1_fAbrBra2.1_alternate_haplotype 7,764 1,090,103,032 3 600 56.77
201 common bream (primary hap 2024 genbank) Abramis brama GCA_963993115.1_fAbrBra2.1 208 1,108,218,292 685 137,000 48.57
202 common bream (primary hap 2024 refseq) Abramis brama GCF_963993115.1_fAbrBra2.1 207 1,108,201,685 685 137,000 57.10
203 common carp (R8XR3 2021) Cyprinus carpio carpio GCA_905221575.1_Cypcar_WagV4.0 674 1,460,348,793 372 37,200 41.50
204 common carp (SPL01 2021) Cyprinus carpio GCF_018340385.1_ASM1834038v1 6,701 1,680,134,903 26,351 7,988,566 38.58
205 common dab (alternate hap 2023) Limanda limanda GCA_963576525.1_fLimLim1.1_alternate_haplotype 2,962 668,994,872 0 0 34.14
206 common dab (primary hap 2023 genbank) Limanda limanda GCA_963576545.1_fLimLim1.1 339 717,597,899 275 55,000 39.18
207 common dab (primary hap 2023 refseq) Limanda limanda GCF_963576545.1_fLimLim1.1 338 717,580,706 275 55,000 35.04
208 common dace (hap1 2025) Leuciscus leuciscus GCF_965113295.1_fLeuLeu2.hap1.1 876 1,198,377,133 1,202 240,400 58.59
209 common dace (hap1.1 2025) Leuciscus leuciscus GCA_965113295.1_fLeuLeu2.hap1.1 876 1,198,377,133 1,202 240,400 42.69
210 common dace (hap2.1 2025) Leuciscus leuciscus GCA_965113325.1_fLeuLeu2.hap2.1 530 1,179,019,172 1,147 229,400 55.35
211 common pandora (2025) Pagellus erythrinus GCA_965643245.1_fPagEry1.1 94 765,667,122 19 2,100 32.22
212 common rudd (hap1.1 2024) Scardinius erythrophthalmus GCF_964197995.1_fScaEry2.hap1.1 754 1,229,649,543 836 167,200 66.89
213 common seabream (hap1.1 2025 genbank) Pagrus pagrus GCA_965226575.1_fPagPag1.hap1.1 576 825,699,107 536 107,200 29.37
214 common seabream (hap1.1 2025 refseq) Pagrus pagrus GCF_965226575.1_fPagPag1.hap1.1 575 825,682,423 536 107,200 35.95
215 common seabream (hap2.1 2025) Pagrus pagrus GCA_965225695.1_fPagPag1.hap2.1 249 786,794,581 535 107,000 26.85
216 common seadragon (TA_2022b 2022) Phyllopteryx taeniolatus GCF_024500385.1_UOR_Ptae_1.2 1,259 652,173,514 196 3,920 40.24
217 common sole (alternate hap 2023) Solea solea GCA_958295035.1_fSolSol10.1_alternate_haplotype 1,318 627,818,797 0 0 31.70
218 common sole (primary hap 2023 refseq) Solea solea GCF_958295425.1_fSolSol10.1 242 643,757,955 373 74,600 32.91
219 common two-banded seabream (2026) Diplodus vulgaris GCA_978021955.1_fDipVul1.1 41 825,880,091 43 5,100 33.93
220 common whitefish (fCorLav1.hap1.1 2024) Coregonus lavaretus GCA_964263955.1_fCorLav1.hap1.1 11,150 2,842,862,595 5,995 1,199,000 61.61
221 common whitefish (fCorLav1.hap2.1 2024) Coregonus lavaretus GCA_964263835.1_fCorLav1.hap2.1 3,980 2,352,365,286 4,689 937,818 61.14
222 common whitefish (hap1.1 2024) Coregonus lavaretus GCF_964263955.1_fCorLav1.hap1.1 11,149 2,842,845,857 5,995 1,199,000 68.20
223 coney (2025) Cephalopholis fulva GCA_977019285.1_fCepFul1.1 44 1,000,380,871 14 1,700 44.27
224 Connemarra clingfish (2025) Lepadogaster candolii GCA_965278445.2_fLepCan2.1 114 1,100,949,132 143 23,700 50.34
225 convict blenny (fPhoLeu1 alternate hap 2021) Pholidichthys leucotaenia GCA_020510965.1_fPhoLeu1.alt 21,417 1,865,716,438 144 143,564 67.06
226 convict blenny (primary hap 2021) Pholidichthys leucotaenia GCA_020510985.1_fPhoLeu1.pri 512 6,032,307,556 2,580 52,780,824 48.95
227 copperband butterflyfish (fCheRos1 alternate hap 2021) Chelmon rostratus GCA_017976315.1_fCheRos1.alt 2,125 601,666,562 1 500 32.92
228 copperband butterflyfish (primary hap 2021 genbank) Chelmon rostratus GCA_017976325.1_fCheRos1.pri 29 644,208,416 60 11,380 26.00
229 copperband butterflyfish (primary hap 2021 refseq) Chelmon rostratus GCF_017976325.1_fCheRos1.pri 29 644,208,431 60 11,380 21.59
230 corkwing wrasse (alternate_hap 2022) Symphodus melops GCA_947650305.1_fSymMel2.1_alternate_haplotype 4,136 605,169,185 1 200 27.48
231 corkwing wrasse (primary hap 2022 genbank) Symphodus melops GCA_947650265.1_fSymMel2.1 395 636,368,453 1,379 275,800 28.78
232 corkwing wrasse (primary hap 2022 refseq) Symphodus melops GCF_947650265.1_fSymMel2.1 395 636,368,453 1,379 275,800 28.78
233 Cornish sucker (2025) Lepadogaster purpurea GCA_965274325.2_fLepPur2.2 92 863,662,561 78 8,700 48.13
234 Corydoras catfish unclassified (C115 2021) Corydoras sp. C115 GCA_019802505.1_Lin1PacBio.ctg.fa.r3p3_pilon_3_oneline.fasta 2,080 699,660,186 0 0 45.33
235 crested bigscale (hap1.1 2025 genbank) Poromitra crassiceps GCA_964638095.1_fPorCra3.hap1.1 2,788 1,630,001,977 2,975 595,000 57.57
236 crested bigscale (hap1.1 2025 refseq) Poromitra crassiceps GCF_964638095.1_fPorCra3.hap1.1 2,788 1,630,001,977 2,975 595,000 55.36
237 crested bigscale (hap2.1 2025) Poromitra crassiceps GCA_964638665.1_fPorCra3.hap2.1 1,407 1,511,638,839 2,894 578,800 56.40
238 crested weedfish (hap1 OG76 2025) Cristiceps australis GCA_049082185.1_fCriAus1.1_haplotype_1 793 619,674,967 1,180 234,700 29.97
239 crested weedfish (hap2 OG76 2025) Cristiceps australis GCA_049082045.1_fCriAus1.1_haplotype_2 513 559,096,705 1,089 215,900 29.02
240 crimson snapper (hap1 2026) Lutjanus erythropterus GCA_056507045.1_fLutEry1.hap1 171 979,950,876 30 5,600 30.43
241 crimson snapper (hap2 2026 genbank) Lutjanus erythropterus GCA_056507025.1_fLutEry1.hap2 121 970,019,684 45 8,300 30.04
242 crimson snapper (hap2 2026 refseq) Lutjanus erythropterus GCF_056507025.1_fLutEry1.hap2 122 970,036,193 45 8,300 30.04
243 crucian carp (alternate hap 2023) Carassius carassius GCA_963082795.1_fCarCar2.1_alternate_haplotype 3,713 209,623,727 0 0 46.45
244 crucian carp (primary hap 2023 refseq) Carassius carassius GCF_963082965.1_fCarCar2.1 277 1,684,296,438 832 166,400 45.86
245 cuckoo wrasse (alternate hap 2023) Labrus mixtus GCA_963583885.1_fLabMix1.1_alternate_haplotype 2,462 700,699,022 0 0 30.60
246 cuckoo wrasse (primary hap 2023 genbank) Labrus mixtus GCA_963584025.1_fLabMix1.1 325 740,579,663 570 114,014 33.86
247 cuckoo wrasse (primary hap 2023 refseq) Labrus mixtus GCF_963584025.1_fLabMix1.1 324 740,563,171 570 114,014 33.86
248 cunner (fTauAds1 alternate hap 2021) Tautogolabrus adspersus GCA_020745675.1_fTauAds1.alt.cur 1,476 695,716,069 31 74,261 30.23
249 cunner (primary hap 2021) Tautogolabrus adspersus GCA_020745685.1_fTauAds1.pri.cur 64 723,582,185 283 4,256,220 30.38
250 curimbata (fProLin1hap1 2026) Prochilodus lineatus GCA_054851125.1_fProLin1.hap1 812 1,448,396,278 1,008 201,600 42.79
251 curimbata (fProLin1hap2 2026) Prochilodus lineatus GCA_054851135.1_fProLin1.hap2 565 1,421,922,085 972 194,400 42.50
252 Dalai köbertrulling (WHDGS20190420 2020) Triplophysa dalaica GCF_015846415.1_ASM1584641v1 51 607,940,176 116 11,600 40.25
253 damselfish (2026) Chromis chromis GCA_984582935.1_fChrCho1.1 41 896,778,020 52 5,400 33.09
254 Danionella translucida (Bolton 2019) Danionella cerebrum GCA_007224835.1_ASM722483v1 27,639 735,303,417 8,366 9,600,144 35.07
255 Danionella translucida (fDanTra1 2020) Danionella cerebrum GCA_903798025.1_fDanTra1.1 11,344 657,340,729 18,487 38,677,057 28.85
256 dark-edged splitfin (DD_20200921_A 2022 refseq) Girardinichthys multiradiatus GCF_021462225.1_DD_fGirMul_XY1 72 1,150,004,004 409 6,172,100 38.37
257 deepreef scorpionfish (2026) Scorpaenodes tredecimspinosus GCA_978264465.1_fScoTre1.1 55 1,049,559,207 106 13,200 44.03
258 deepwater redfish (fSebMen1hap1 2026) Sebastes mentella GCA_054850865.1_fSebMen1.hap1 463 834,814,673 465 92,845 45.97
259 deepwater redfish (fSebMen1hap2 2026) Sebastes mentella GCA_054851115.1_fSebMen1.hap2 217 817,773,861 476 95,045 45.81
260 delta smelt Hypomesus transpacificus GCF_021917145.1_fHypTra1 376 437,273,953 1,474 354,099 32.53
261 delta smelt (T3M02_BM_FFhap1 2026) Hypomesus transpacificus GCA_059995925.1_fHypTra1.hap1 1,164 514,875,550 2,286 456,875 36.10
262 delta smelt (T3M02_BM_FFhap2 2026) Hypomesus transpacificus GCA_059995935.1_fHypTra1.hap2 1,224 462,374,645 2,057 411,053 34.31
263 denticle herring (alternate hap 2019) Denticeps clupeoides GCA_900700345.2_fDenClu1.1_alternate_haplotype 1,972 457,704,509 4 226 27.74
264 denticle herring (primary hap 2020) Denticeps clupeoides GCF_900700375.2_fDenClu1.2 460 567,401,054 464 4,648,387 29.70
265 denticle herring (v2 2020) Denticeps clupeoides GCA_900700375.2_fDenClu1.2 461 567,417,970 464 4,648,387 28.83
266 doctor fish G.rufa (2025) Garra rufa GCF_049309525.1_GarRuf1.0 1,000 1,391,285,389 14,924 7,496,371 52.96
267 Doderlein's wrasse (2026) Symphodus doderleini GCA_979616585.1_fSymDod1.1 147 658,301,760 823 89,200 29.88
268 dorado (hap1 2023) Salminus brasiliensis GCA_030448965.1_fSalBra1.hap1 182 1,078,246,036 641 20,261,167 36.11
269 dorado (hap2 2023 refseq) Salminus brasiliensis GCF_030463535.1_fSalBra1.hap2 103 1,066,483,687 726 9,072,217 36.78
270 dory snapper (1 fLutFuv1fLutFuv1.hap1.cur.20230525 2026) Lutjanus fulviflamma GCA_059550335.1_fLutFuv1.hap1.cur.20230525 1,003 1,159,405,073 127 24,500 34.81
271 dory snapper (1 fLutFuv1fLutFuv1.hap2.cur.20230525 2026) Lutjanus fulviflamma GCA_059550295.1_fLutFuv1.hap2.cur.20230525 535 1,115,923,382 127 24,600 33.19
272 double-spotted pufferfish T.bimaculatus (TB-2018 2019) Takifugu bimaculatus GCA_004026145.2_XU_Tbim_1.0 1,158 404,311,738 1,033 104,200 22.77
273 dwarf seahorse (Florida 2022) Hippocampus zosterae GCF_025434085.1_ASM2543408v3 213 544,521,268 79 1,580 41.86
274 eastern happy (2025) Astatotilapia calliptera GCA_900246225.6_fAstCal1.5 144 877,738,871 530 1,191,738 37.24
275 eastern happy (alternate hap 2024) Astatotilapia calliptera GCA_964374285.1_fAstCal68.1_alternate_haplotype 1,718 845,253,161 1 100 38.28
276 eastern happy (primary hap 2024) Astatotilapia calliptera GCA_964374335.1_fAstCal68.1 31 933,429,770 40 4,500 32.72
277 Eastern happy (primary hap 2024) Astatotilapia calliptera GCF_964374335.1_fAstCal68.1 30 933,413,188 40 4,500 38.89
278 eastern happy (v3 2021) Astatotilapia calliptera GCA_900246225.5_fAstCal1.3 249 880,445,568 490 1,186,663 35.92
279 Eckström's topknot Z.regius (2025) Zeugopterus regius GCA_965642325.1_fZeuReg1.1 76 476,591,588 22 2,600 26.52
280 electric eel (alternate hap 2020) Electrophorus electricus GCA_013347915.1_fEleEle1.alt 2,629 428,136,346 0 0 24.43
281 electric eel (MRS-EE1 2018 U Wisconsin) Electrophorus electricus GCF_003665695.1_Ee_SOAP_WITH_SSPACE 8,786 551,880,868 119,361 17,042,720 21.59
282 electric eel (primary hap 2020 refseq) Electrophorus electricus GCF_013358815.1_fEleEle1.pri 89 589,358,956 227 10,599,768 24.89
283 electric eel (QZ-2024a 2024 genbank) Electrophorus electricus GCA_041902795.1_ASM4190279v1 460 833,427,914 49 2,104,217 42.36
284 electric eel (QZ-2024a 2024 refseq) Electrophorus electricus GCF_041902795.1_ASM4190279v1 460 833,427,914 49 2,104,217 42.36
285 elephant fish B.brachyistius (T26 2022) Brienomyrus brachyistius GCF_023856365.1_BBRACH_0.4 1,425 988,088,817 234 112,552 35.02
286 emerald rockcod Trematomus bernacchii GCF_902827165.1_fTreBer1.1 864 867,125,071 932 117,692 40.13
287 emperor red snapper (12 fLutSeb1fLutSeb1.hap1.cur.20230516 2026) Lutjanus sebae GCA_059550175.1_fLutSeb1.hap1.cur.20230516 168 989,601,721 347 68,600 29.78
288 emperor red snapper (12 fLutSeb1fLutSeb1.hap2.cur.20230516 2026) Lutjanus sebae GCA_059550155.1_fLutSeb1.hap2.cur.20230516 117 985,004,336 344 68,200 29.79
289 Eurasian minnow (alternate hap 2023) Phoxinus phoxinus GCA_949152275.1_fPhoPho1.1_alternate_haplotype 4,941 925,610,136 8 1,600 44.35
290 Eurasian minnow (primary hap 2023 genbank) Phoxinus phoxinus GCA_949152265.1_fPhoPho1.1 125 950,498,056 881 176,200 44.44
291 Eurasian minnow (primary hap 2023 refseq) Phoxinus phoxinus GCF_949152265.1_fPhoPho1.1 124 950,479,694 881 176,200 51.89
292 European anchovy (BLACKSEA-1 2023) Engraulis encrasicolus GCF_034702125.1_IST_EnEncr_1.0 1,922 1,435,200,347 9,202 222,396 50.58
293 European chub (alternate hap 2023) Squalius cephalus GCA_949319155.1_fSquCep2.1_alternate_haplotype 7,425 979,250,430 12 2,400 48.14
294 European chub (primary hap 2023 genbank) Squalius cephalus GCA_949319135.1_fSquCep2.1 106 1,101,930,522 588 117,600 49.02
295 European chub (primary hap 2023 refseq) Squalius cephalus GCF_949319135.1_fSquCep2.1 105 1,101,913,912 588 117,600 56.93
296 European conger (primary hap 2023 refseq) Conger conger GCF_963514075.1_fConCon1.1 380 1,136,402,888 1,009 201,800 35.55
297 European flounder (alternate hap 2023) Platichthys flesus GCA_949316195.1_fPlaFle2.1_alternate_haplotype 1,915 587,918,088 0 0 26.42
298 European flounder (primary hap 2023 genbank) Platichthys flesus GCA_949316205.1_fPlaFle2.1 109 597,138,466 482 96,400 27.15
299 European flounder (primary hap 2023 refseq) Platichthys flesus GCF_949316205.1_fPlaFle2.1 108 597,120,941 482 96,400 27.16
300 European perch Perca fluviatilis GCF_010015445.1_GENO_Pfluv_1.0 303 951,345,774 801 292,795 37.11
301 European plaice (alternate hap 2022) Pleuronectes platessa GCA_947347695.1_fPlePla1.1_alternate_haplotype 3,219 613,421,917 3 600 28.01
302 European plaice (primary hap 2022 refseq) Pleuronectes platessa GCF_947347685.1_fPlePla1.1 355 687,388,084 1,072 214,400 33.59
303 European pollock (primary hap 2023) Pollachius pollachius GCF_949987615.1_fPolPol2.1 615 606,750,899 1,810 362,000 35.15
304 European sardine (alternate hap 2023) Sardina pilchardus GCA_963854175.1_fSarPil1.1_alternate_haplotype 4,089 935,120,696 3,349 669,625 37.79
305 European seabass (2021) Dicentrarchus labrax GCF_905237075.1_dlabrax2021 303 695,910,406 272 1,022,065 26.22
306 European seabass (2025) Dicentrarchus labrax GCA_977040325.1_fDicLab2.1 59 699,158,478 10 1,200 26.75
307 European smelt (alternate hap 2023) Osmerus eperlanus GCA_963692645.1_fOsmEpe2.1_alternate_haplotype 5,995 420,609,216 3 600 33.72
308 European smelt (primary hap 2023 genbank) Osmerus eperlanus GCA_963692335.1_fOsmEpe2.1 1,008 508,737,883 2,462 492,400 35.91
309 European smelt (primary hap 2023 refseq) Osmerus eperlanus GCF_963692335.1_fOsmEpe2.1 1,007 508,721,272 2,462 492,400 35.92
310 European sprat (alternate hap 2023) Sprattus sprattus GCA_963457685.1_fSprSpr1.1_alternate_haplotype 4,969 803,136,922 2 400 38.74
311 European sprat (primary hap 2023 genbank) Sprattus sprattus GCA_963457725.1_fSprSpr1.1 387 840,332,306 1,501 300,226 35.52
312 European sprat (primary hap 2023 refseq) Sprattus sprattus GCF_963457725.1_fSprSpr1.1 386 840,315,637 1,501 300,226 40.44
313 fathead minnow Pimephales promelas GCF_016745375.1_EPA_FHM_2.0 911 1,066,429,022 5,594 141,038,611 35.72
314 featherfin pearlfish (hap1 2026) Ophthalmolebias constanciae GCA_058774925.1_fOphCon1.hap1 570 1,900,758,768 490 98,000 64.81
315 featherfin pearlfish (hap2 2026) Ophthalmolebias constanciae GCA_058774905.1_fOphCon1.hap2 376 1,794,386,779 490 98,000 63.62
316 five-lined snapper (fLutQui1 2026) Lutjanus quinquelineatus GCA_057930345.1_ASM5793034v1 594 997,111,695 86 17,200 35.59
317 fiveband surgeonfish (2026) Acanthurus tractus GCA_980438365.1_fAcaTra1.1 28 650,177,444 23 2,500 30.17
318 flathead mullet Mugil cephalus GCF_022458985.1_CIBA_Mcephalus_1.1 24 634,849,760 445 222,500 24.79
319 flavescent peacock cichlid (primary hap 2025 genbank) Aulonocara stuartgranti GCA_965226115.1_fAulStu2.1 23 945,383,024 31 4,300 33.28
320 flavescent peacock cichlid (primary hap 2025 refseq) Aulonocara stuartgranti GCF_965226115.1_fAulStu2.1 22 945,366,440 31 4,300 43.09
321 flier cichlid (alternate hap MPI-CPG 2019) Archocentrus centrarchus GCA_007364235.1_fArcCen1_v1.h 9,292 1,034,011,644 13 209,959 30.50
322 flier cichlid (MPI-CPG 2019 refseq) Archocentrus centrarchus GCF_007364275.1_fArcCen1 188 932,930,362 744 16,903,477 30.69
323 forkbeard (2026) Phycis phycis GCA_978484525.1_fPhyPhy1.1 34 565,357,171 10 1,300 34.29
324 four-banded tigerfish (fDatPol1hap1 2026) Datnioides polota GCA_054851445.1_fDatPol1.hap1 68 578,164,631 112 21,900 21.63
325 four-banded tigerfish (fDatPol1hap2 2026) Datnioides polota GCA_054883175.1_fDatPol1.hap2 48 577,847,626 129 24,000 21.74
326 French grunt (2025) Haemulon flavolineatum GCA_977076405.1_fHaeFla1.1 56 709,698,976 11 1,400 38.32
327 freshwater butterflyfish (hap1 2026) Pantodon buchholzi GCA_059756545.1_fPanBuc1.hap1 28 532,066,212 68 13,600 30.76
328 freshwater butterflyfish (hap2 2026) Pantodon buchholzi GCA_059756555.1_fPanBuc1.hap2 25 527,087,326 71 14,200 30.41
329 freshwater garfish (fXenCan1 alternate hap 2020) Xenentodon cancila GCA_014839645.1_fXenCan1.alt 5,169 658,557,970 2 1,000 26.36
330 freshwater garfish (primary hap 2020) Xenentodon cancila GCA_014839995.1_fXenCan1.pri 410 736,214,936 1,373 7,503,584 27.54
331 fringed filefish (2025) Monacanthus ciliatus GCA_977018155.1_fMonCil1.1 146 476,314,676 426 46,200 29.83
332 giant goby (2025) Gobius cobitis GCA_977064505.1_fGobCob1.1 228 859,832,672 131 16,300 41.23
333 giant grouper (andai-2023 2024 genbank) Epinephelus lanceolatus GCA_041903045.1_ASM4190304v1 176 1,089,387,278 7 3,500 33.30
334 giant grouper (andai-2023 2024 refseq) Epinephelus lanceolatus GCF_041903045.1_ASM4190304v1 177 1,089,403,852 7 3,500 45.98
335 giant grouper (Andai001 2019) Epinephelus lanceolatus GCF_005281545.1_ASM528154v1 4,201 1,087,415,941 23,415 39,254,828 30.31
336 giant-fin mudskipper (primary hap 2023) Periophthalmus magnuspinnatus GCA_009829125.3_fPerMag1.2.pri 123 752,622,057 701 7,178,761 43.08
337 gilthead seabream (alternate hap 2019) Sparus aurata GCA_900880695.1_fSpaAur1.1_alternate_haplotype 7,239 668,417,842 2 532 24.38
338 gilthead seabream (primary hap 2021) Sparus aurata GCF_900880675.2_fSpaAur1.2 175 833,578,411 1,050 342,268 29.61
339 gilthead seabream (v2 2021) Sparus aurata GCA_900880675.2_fSpaAur1.2 176 833,595,063 1,050 342,268 29.60
340 girdled pipefish (MCC-2025b 2025) Festucalex cinctus GCF_051991245.1_RoL_Fcin_1.0 463 695,194,371 101 2,020 49.43
341 glasseye (2025) Heteropriacanthus cruentatus GCA_977009785.1_fHetCru1.1 66 681,333,371 59 7,100 36.08
342 glassy sweeper (hap1 2025) Pempheris schomburgkii GCA_054100275.1_fPemSco2.hap1 539 746,095,966 322 64,400 41.50
343 glassy sweeper (hap2 2025) Pempheris schomburgkii GCA_054100245.1_fPemSco2.hap2 485 730,627,138 275 55,000 40.53
344 golden grey mullet (2026) Chelon auratus GCA_982589965.1_fCheAur1.1 95 687,979,409 24 2,700 28.10
345 golden-line barbel Sinocyclocheilus grahami GCF_001515645.1_SAMN03320097.WGS_v1.1 31,277 1,750,287,761 136,894 182,848,609 37.17
346 goldeye (hap1 2026) Hiodon alosoides GCA_056783565.1_fHioAlo1.hap1 283 850,984,464 162 24,700 31.31
347 goldfish Carassius auratus GCF_003368295.1_ASM336829v1 6,216 1,820,635,050 2,247 224,700 40.21
348 goldsinny wrasse (2025) Ctenolabrus rupestris GCA_965358205.2_fCteRup1.2 147 767,190,745 528 58,800 37.77
349 goldspot goby (2026) Gnatholepis thompsoni GCA_984577815.1_fGnaTho1.1 330 1,211,077,838 225 23,200 47.73
350 grass carp (HZGC_01 2021) Ctenopharyngodon idella GCF_019924925.1_HZGC01 31 893,215,104 150 150,000 40.24
351 great blue-spotted mudskipper (Guang Dong 2022) Boleophthalmus pectinirostris GCF_026225935.1_ASM2622593v1 600 941,505,238 3,407 3,486,618 54.69
352 great blue-spotted mudskipper (pooled male+femail 2014 BGI) Boleophthalmus pectinirostris GCF_000788275.1_BP.fa 16,620 955,752,150 92,327 65,847,082 42.56
353 greater amberjack Seriola dumerili GCF_002260705.1_Sdu_1.0 34,656 677,686,174 9,742 5,561,840 24.75
354 greater argentine (alternate hap 2023) Argentina silus GCA_951799415.1_fArgSil1.1_alternate_haplotype 4,805 550,403,860 0 0 35.98
355 greater argentine (primary hap 2023 genbank) Argentina silus GCA_951799395.1_fArgSil1.1 1,024 670,765,936 1,752 350,400 39.30
356 greater argentine (primary hap 2023 refseq) Argentina silus GCF_951799395.1_fArgSil1.1 1,024 670,765,936 1,752 350,400 41.97
357 greater pipefish (primary hap 2020) Syngnathus acus GCA_901709675.2_fSynAcu1.2 88 324,347,687 43 13,700 25.95
358 greater pipefish (v1 alternate hap 2019) Syngnathus acus GCA_901709685.1_fSynAcu1.1_alternate_haplotype 1,848 234,858,432 2 600 23.32
359 greater pipefish (v1.2 2020 refseq) Syngnathus acus GCF_901709675.1_fSynAcu1.2 87 324,331,233 43 13,700 25.95
360 greater pipefish (v2 2023 genbank) Syngnathus acus GCA_948146105.1_fSynAcu2.1 251 359,216,277 95 19,000 34.10
361 greater pipefish (v2 alternate haplotype 2023) Syngnathus acus GCA_948146095.1_fSynAcu2.1_alternate_haplotype 4,533 334,243,819 0 0 29.10
362 greater sand-eel (alternate hap 2023) Hyperoplus immaculatus GCA_949358355.1_fHypImm3.1_alternate_haplotype 4,952 763,769,615 0 0 38.84
363 greater sand-eel (primary hap 2023) Hyperoplus immaculatus GCA_949357725.1_fHypImm3.1 1,568 797,804,280 1,188 237,600 40.07
364 green rivulus (hap1 2026) Rivulus cylindraceus GCA_058775085.1_fRivCyl1.hap1 268 678,148,045 15 3,000 33.60
365 green rivulus (hap2 2026) Rivulus cylindraceus GCA_058775155.1_fRivCyl1.hap2 117 644,485,754 41 8,200 32.18
366 green swordtail Xiphophorus hellerii GCF_003331165.1_Xiphophorus_hellerii-4.1 87 732,906,125 661 2,127,807 28.89
367 green wrasse (2026) Labrus viridis GCA_980909795.1_fLabVir1.1 77 708,878,304 346 37,400 31.61
368 grey gurnard (alternate hap 2023) Eutrigla gurnardus GCA_963514115.1_fEutGur1.1_alternate_haplotype 2,523 662,358,898 0 0 38.23
369 grey gurnard (primary hap 2023 genbank) Eutrigla gurnardus GCA_963514095.1_fEutGur1.1 319 680,483,561 553 110,600 35.71
370 grey gurnard (primary hap 2023 refseq) Eutrigla gurnardus GCF_963514095.1_fEutGur1.1 319 680,483,561 553 110,600 39.58
371 grey wrasse (2026) Symphodus cinereus GCA_977927475.1_fSymCin1.1 48 622,367,766 387 44,000 27.19
372 gudgeon (alternate hap 2023) Gobio gobio GCA_949357705.1_fGobGob1.1_alternate_haplotype 7,245 1,349,092,698 8 1,600 67.88
373 gudgeon (primary hap 2023 genbank) Gobio gobio GCA_949357685.1_fGobGob1.1 231 1,460,679,231 1,046 209,200 68.84
374 gudgeon (primary hap 2023 refseq) Gobio gobio GCF_949357685.1_fGobGob1.1 230 1,460,662,624 1,046 209,200 66.30
375 Gulf pipefish (Florida 2022) Syngnathus scovelli GCF_024217435.2_RoL_Ssco_1.2 495 428,400,902 11 220 43.65
376 Gulf pipefish (RoL_Ssco_1.1 Florida 2022 refseq) Syngnathus scovelli GCF_024217435.1_RoL_Ssco_1.1 496 428,432,749 11 220 43.65
377 Gulf pipefish (RoL_Ssco_1.2 Florida 2022 genbank) Syngnathus scovelli GCA_024217435.4_RoL_Ssco_1.2 496 428,417,373 11 220 43.65
378 guppy Poecilia reticulata GCF_000633615.1_Guppy_female_1.0_MT 2,767 731,621,225 458,354 67,451,939 25.67
379 guppy (2025) Poecilia reticulata GCF_904066995.2_P_reticulata-male-v2 182 744,984,804 343 83,732 30.93
380 herring cale (hap1 2026) Olisthops cyanomelas GCA_984755405.1_Olisthops_cyanomelas_haplotype_1_assembly 506 715,410,824 173 33,800 30.64
381 herring cale (hap2 2026) Olisthops cyanomelas GCA_984755515.1_Olisthops_cyanomelas_haplotype_2_assembly 185 682,342,290 127 23,500 27.68
382 honeycomb rockfish (fSebUmb1 alternate hap 2020) Sebastes umbrosus GCA_015220095.1_fSebUmb1.alt 2,131 765,970,641 21 855 37.65
383 honeycomb rockfish (primary hap 2020 genbank) Sebastes umbrosus GCA_015220745.1_fSebUmb1.pri 139 800,921,631 215 1,393,892 43.58
384 honeycomb rockfish (primary hap 2020 refseq) Sebastes umbrosus GCF_015220745.1_fSebUmb1.pri 138 800,904,020 215 1,393,892 36.28
385 hooknose (2025) Agonus cataphractus GCA_975247245.1_fAgoCat1.1 313 673,574,728 876 102,800 33.36
386 horned golden-line barbel Sinocyclocheilus rhinocerous GCF_001515625.1_SAMN03320098_v1.1 164,172 1,655,785,943 150,790 134,307,852 35.97
387 humpback grouper (ca_2020 2021) Cromileptes altivelis GCA_019925165.1_OUC_Cal_1.0 306 1,083,008,411 518 53,228 45.72
388 humphead wrasse Cheilinus undulatus GCF_018320785.1_ASM1832078v1 46 1,173,472,134 284 28,400 33.01
389 Indian glassy fish (alternate hap 2019) Parambassis ranga GCA_900651595.1_fParRan2.1_alternate_haplotype 2,242 486,545,135 230 2,056,711 24.11
390 Indian glassy fish (primary hap 2020) Parambassis ranga GCF_900634625.2_fParRan2.2 156 551,012,959 1,523 10,561,548 25.10
391 Indian glassy fish (v2 2020) Parambassis ranga GCA_900634625.2_fParRan2.2 157 551,029,983 1,523 10,561,548 25.10
392 Indian medaka Oryzias melastigma GCF_002922805.2_ASM292280v2 8,493 778,703,520 51,550 40,471,418 33.35
393 Indo-Pacific tarpon (2020) Megalops cyprinoides GCF_013368585.1_fMegCyp1.pri 207 959,258,046 63 283,098 22.11
394 Japanese flounder Paralichthys olivaceus GCF_001970005.1_Flounder_ref_guided_V1.0 9,525 643,911,827 40,314 122,165,179 17.39
395 Japanese flounder (ysfri-2021 2022) Paralichthys olivaceus GCF_024713975.1_ASM2471397v2 25 588,187,604 21 2,100 26.58
396 Japanese jack mackerel (2024) Trachurus japonicus GCF_045865225.1_Traja_1.0 1,597 867,708,881 2,141 214,100 39.49
397 Japanese medaka Oryzias latipes GCF_002234675.1_ASM223467v1 25 734,057,086 491 491,000 34.95
398 Japanese medaka (Hd-rR 2025) Oryzias latipes GCF_053564925.1_Olatipes_Hd-rR_3.1 27 863,417,014 0 0 42.56
399 Japanese puffer (torafugu primary hap 2021) Takifugu rubripes GCF_901000725.3_fTakRub1.3 127 384,110,215 402 3,688,529 20.93
400 Japanese smelt (2026) Hypomesus nipponensis GCF_054491055.1_ASM5449105v1 29 526,330,944 0 0 35.04
401 jewelled blenny (alternate hap 2019) Salarias fasciatus GCA_902148835.1_fSalaFa1.1_alternate_haplotype 4,516 894,675,777 9 3,272,521 28.60
402 jewelled blenny (primary hap 2019 genbank) Salarias fasciatus GCA_902148845.1_fSalaFa1.1 202 797,490,645 602 10,447,897 26.62
403 jewelled blenny (primary hap 2019 refseq) Salarias fasciatus GCF_902148845.1_fSalaFa1.1 203 797,507,141 602 10,447,897 26.61
404 John dory (alternate hap 2023) Zeus faber GCA_960530785.1_fZeuFab8.1_alternate_haplotype 5,370 809,816,570 0 0 40.06
405 John dory (alternate hap 2026) Zeus faber GCA_960530785.2_fZeuFab8.2_alternate_haplotype 5,370 809,816,570 0 0 46.81
406 John dory (primary hap 2023 genbank) Zeus faber GCA_960531495.1_fZeuFab8.1 191 804,731,948 887 177,400 39.97
407 John dory (primary hap 2023 refseq) Zeus faber GCF_960531495.1_fZeuFab8.1 190 804,715,226 887 177,400 46.65
408 John dory (primary hap 2026) Zeus faber GCA_960531495.2_fZeuFab8.2 179 804,326,546 887 177,400 46.67
409 kelp grouper (mb 2019) Epinephelus moara GCF_006386435.1_YSFRI_EMoa_1.0 4,563 1,030,477,684 48,394 30,797,138 29.13
410 kelp perch (BFR_SWC_R1_liver_20210118 2023) Brachyistius frenatus GCF_029030835.1_ASM2903083v1 1,003 595,935,260 0 0 26.91
411 Kolombatovic's goby (2026) Chromogobius zebratus GCA_982768625.1_fChrZer1.1 397 1,157,874,580 134 13,800 55.20
412 Korean giant-fin mudskipper (v1 alternate hap 2020 genbank) Periophthalmus magnuspinnatus GCA_009829135.1_fPerMag1.alt 2,799 698,977,026 1 500 39.04
413 Korean giant-fin mudskipper (v1.2 primary hap 2023) Periophthalmus magnuspinnatus GCF_009829125.3_fPerMag1.2.pri 122 752,605,561 701 7,178,761 43.07
414 Lake Tanganyika scale-eating cichlid (2025) Perissodus microlepis GCF_051167445.1_ASM5116744v1 72 853,313,261 127 25,325 41.20
415 lake trout Salvelinus namaycush GCF_016432855.1_SaNama_1.0 4,121 2,345,513,378 3,264 326,400 54.51
416 lake whitefish (EN20210322 male 2021 Laval U) Coregonus clupeaformis GCF_018398675.1_ASM1839867v1 6,355 2,682,612,311 1,716 74,680 61.22
417 lake whitefish (EN_2021a female 2021 Laval U) Coregonus clupeaformis GCF_020615455.1_ASM2061545v1 7,334 2,753,287,365 1,159 120,877 61.18
418 lantern fish (alternate hap 2024) Nannobrachium achirus GCA_963921835.1_fNanAch1.1_alternate_haplotype 9,986 1,620,255,849 108 21,600 53.45
419 lantern fish (primary hap 2024 genbank) Nannobrachium achirus GCA_963921795.1_fNanAch1.1 673 1,658,848,640 2,397 479,400 54.08
420 lantern fish (primary hap 2024 refseq) Nannobrachium achirus GCF_963921795.1_fNanAch1.1 673 1,658,848,640 2,397 479,400 54.08
421 large yellow croaker Larimichthys crocea GCF_000972845.2_L_crocea_2.0 9,998 657,939,657 7,424 2,166,101 24.87
422 large-eye snaggletooth (alternate hap 2023) Borostomias antarcticus GCA_949987545.1_fBorAnt1.1_alternate_haplotype 5,761 788,134,964 0 0 42.72
423 large-eye snaggletooth (primary hap 2023 genbank) Borostomias antarcticus GCA_949987555.1_fBorAnt1.1 1,378 909,249,001 2,631 526,200 46.88
424 large-eye snaggletooth (primary hap 2023 refseq) Borostomias antarcticus GCF_949987555.1_fBorAnt1.1 1,378 909,249,001 2,631 526,200 54.64
425 large-scale loach P.dabryanus (BB 2023) Paramisgurnus dabryanus GCF_030506205.1_PD_contigs_1.0 610 1,425,974,144 1 60 50.18
426 largemouth bass (2-A1 2021) Micropterus salmoides GCA_019677235.1_HNU_Msal_1.0 202 877,669,248 672 335,002 29.68
427 largemouth bass (LMB-PRFRI aquatic 2020) Micropterus salmoides GCF_014851395.1_ASM1485139v1 4,753 963,613,914 2,909 1,454,500 29.63
428 largescale foureyes (fAnaAna1 alternate hap 2020) Anableps anableps GCA_014839705.1_fAnaAna1.alt 5,088 445,542,990 0 0 27.42
429 largescale foureyes (primary hap 2020) Anableps anableps GCA_014839685.1_fAnaAna1.pri 33 867,632,993 107 306,559 29.88
430 leafy seadragon (BA_2022a 2022) Phycodurus eques GCF_024500275.1_UOR_Pequ_1.1 1,537 666,479,602 76 1,760 41.21
431 lemon sole (alternate hap 2024) Microstomus kitt GCA_964266705.1_fMicKit1.1_alternate_haplotype 7,487 928,207,996 0 0 47.15
432 lemon sole (primary hap 2024) Microstomus kitt GCA_964266715.1_fMicKit1.1 1,581 752,333,918 409 81,800 39.40
433 leopard coralgrouper Plectropomus leopardus GCF_008729295.1_YSFRI_Pleo_2.0 94,260 895,705,288 3,611 15,810,414 29.38
434 leopard coralgrouper (2020) Plectropomus leopardus GCA_011397275.1_Pleo_1.0 110 787,600,493 1,076 538,000 29.87
435 leopard coralgrouper (mb 2020) Plectropomus leopardus GCA_008729295.2_YSFRI_Pleo_2.0 94,259 895,688,574 3,611 15,810,414 29.38
436 leopard-spotted goby (2025) Thorogobius ephippiatus GCA_965366085.1_fThoEph1.1 1,051 1,018,347,539 186 20,700 53.08
437 lesser salmon catfish (fNeoGra1 alternate hap 2023) Neoarius graeffei GCA_027579805.1_fNeoGra1.alt 6,590 2,195,086,485 3 67 62.71
438 lesser salmon catfish (primary hap 2023 refseq) Neoarius graeffei GCF_027579695.1_fNeoGra1.pri 38 2,341,916,362 334 13,260,140 71.56
439 lesser sand eel (primary hap 2023) Ammodytes marinus GCF_949987685.1_fAmmMar1.1 616 777,819,083 1,017 203,400 41.75
440 lesser sand-eel (alternate hap 2023) Ammodytes marinus GCA_950004245.1_fAmmMar1.1_alternate_haplotype 3,619 756,335,084 1 200 38.09
441 lesser sand-eel (primary hap 2023) Ammodytes marinus GCA_949987685.1_fAmmMar1.1 617 777,835,610 1,017 203,400 39.22
442 lesser weever (alternate hap 2023) Echiichthys vipera GCA_963691805.1_fEchVip8.1_alternate_haplotype 3,240 738,382,560 2 400 32.68
443 lesser weever (primary hap 2023 genbank) Echiichthys vipera GCA_963691815.1_fEchVip8.1 133 800,398,249 606 121,200 33.26
444 lesser weever (primary hap 2023 refseq) Echiichthys vipera GCF_963691815.1_fEchVip8.1 132 800,381,326 606 121,200 33.54
445 Liechtenstein's goby (2026) Corcyrogobius liechtensteini GCA_982529875.1_fCorLie1.1 213 999,123,557 55 7,000 51.01
446 limp eelpout (alternate hap 2023) Melanostigma gelatinosum GCA_949748265.1_fMelGel1.1_alternate_haplotype 2,698 629,798,166 2 400 30.28
447 limp eelpout (primary hap 2023 genbank) Melanostigma gelatinosum GCA_949748355.1_fMelGel1.1 534 661,975,483 589 119,200 33.26
448 limp eelpout (primary hap 2023 refseq) Melanostigma gelatinosum GCF_949748355.1_fMelGel1.1 534 661,975,483 589 119,200 35.69
449 live sharksucker (alternate hap 2019) Echeneis naucrates GCA_900963505.1_fEcheNa1.1_alternate_haplotype 1,405 528,272,450 19 224,651 22.09
450 live sharksucker (primary hap 2021) Echeneis naucrates GCF_900963305.2_fEcheNa1.2 37 544,212,633 140 599,356 21.82
451 live sharksucker (v2 2021) Echeneis naucrates GCA_900963305.2_fEcheNa1.2 38 544,229,243 140 599,356 21.82
452 long-snouted boarfish (hap1 2026) Pentaceropsis recurvirostris GCA_984749165.1_Pentaceropsis_recurvirostris_haplotype_1_assembly 178 708,455,635 66 12,800 28.31
453 long-snouted boarfish (hap2 2026) Pentaceropsis recurvirostris GCA_984749275.1_Pentaceropsis_recurvirostris_haplotype_2_assembly 112 690,885,203 61 10,900 26.29
454 long-snouted seahorse (2026) Hippocampus guttulatus GCF_054856545.1_RoL_Hgut_1.0 193 493,111,157 0 0 37.59
455 long-spine porcupinefish (2026) Diodon holocanthus GCA_984586875.1_fDioHol1.1 25 666,440,257 99 18,300 30.33
456 long-spined sea scorpion (primary hap 2021) Taurulus bubalis GCF_910589615.1_fTauBub2.1 27 615,153,901 242 77,100 28.62
457 longfin smelt (GVL_Longfin_01 2026) Spirinchus thaleichthys GCA_052324805.2_GVL_SpThal_2.0 601 591,435,008 1,493 149,300 43.43
458 longfin smelt (hap1 2026) Spirinchus thaleichthys GCA_057657765.1_bSpiTri1.hap1 1,436 572,147,838 783 156,600 44.65
459 longfin smelt (hap2 2026) Spirinchus thaleichthys GCA_057657725.1_bSpiTri1.hap2 1,239 594,132,119 824 164,831 44.15
460 longhead flathead (hap1 2026) Leviprora inops GCA_984748375.1_Leviprora_inops_haplotype_1_assembly 81 835,356,336 110 21,200 47.37
461 longhead flathead (hap2 2026) Leviprora inops GCA_984746715.1_Leviprora_inops_haplotype_2_assembly 72 838,060,885 125 22,700 47.44
462 longspine squirrelfish (2026) Holocentrus rufus GCA_978836905.1_fHolRuf1.1 44 727,580,121 14 1,400 26.74
463 longspined bullhead (.1 primary hap 2021) Taurulus bubalis GCA_910589615.1_fTauBub2.1 27 615,153,901 242 77,100 28.62
464 longspined bullhead (fTauBub2.1 alternate hap 2021) Taurulus bubalis GCA_910589325.1_fTauBub2.1_alternate_haplotype 1,778 614,755,631 0 0 28.10
465 lumpfish (alternate hap 2019) Cyclopterus lumpus GCA_009769515.1_fCycLum1.alt 1,866 480,967,379 0 0 28.18
466 lumpfish (alternate hap 2023) Cyclopterus lumpus GCA_963457675.1_fCycLum2.1_alternate_haplotype 4,450 570,055,135 0 0 29.29
467 lumpfish (primary hap v2.1 2023 genbank) Cyclopterus lumpus GCA_963457625.1_fCycLum2.1 232 586,296,809 954 190,814 30.29
468 lumpfish (v1 primary hap 2019 refseq) Cyclopterus lumpus GCF_009769545.1_fCycLum1.pri 48 572,885,595 347 10,182,204 28.09
469 lyretail cichlid Neolamprologus brichardi GCF_000239395.1_NeoBri1.0 9,083 847,883,811 109,100 161,986,532 19.51
470 Macquarie perch (MP_SCH12 2025) Macquaria australasica GCA_005408345.2_DU_Maus_v2.0 1,971 677,147,139 2,749 1,293,123 27.05
471 Mainland's goby (hap1 2026) Psilogobius mainlandi GCA_059746265.1_fPsiMai1.hap1 254 1,388,358,147 80 16,000 49.45
472 Mainland's goby (hap2 2026) Psilogobius mainlandi GCA_059746255.1_fPsiMai1.hap2 154 1,358,949,366 82 16,400 48.84
473 Malawi cichilid R.sp. 'chilingali' (alternate hap 2024) Rhamphochromis sp. 'chilingali' GCA_963969275.1_fRhaChi2.1_alternate_haplotype 2,406 738,725,802 0 0 39.87
474 Malawi cichlid R.sp.'chilingali' (2024) Rhamphochromis sp. 'chilingali' GCA_963969265.1_fRhaChi2.1 82 921,184,210 422 84,400 38.20
475 mandarin fish (A2ci 2020) Siniperca chuatsi GCA_011952085.1_sinChu7 1,155 755,045,244 308 1,078,130 27.27
476 mandarin fish (FFG_IHB_CAS 2021) Siniperca chuatsi GCF_020085105.1_ASM2008510v1 65 718,820,513 93 9,300 27.44
477 mandarin fish (RoL2022-P1 2023) Synchiropus splendidus GCF_027744825.2_RoL_Sspl_1.0 97 582,898,256 19 361 32.12
478 mangrove rivulus Kryptolebias marmoratus GCF_001649575.2_ASM164957v2 300 680,655,669 32,278 38,822,415 27.34
479 marbled rockcod (alternate hap 2023) Notothenia rossii GCA_949606865.1_fNotRos5.1_alternate_haplotype 8,737 1,005,523,998 0 0 45.04
480 marbled rockcod (primary hap 2023 genbank) Notothenia rossii GCA_949606895.1_fNotRos5.1 943 1,042,906,029 4,157 831,400 44.98
481 marbled rockcod (primary hap 2023 refseq) Notothenia rossii GCF_949606895.1_fNotRos5.1 942 1,042,884,354 4,157 831,400 53.67
482 Mariana snailfish (Mariana Trench HS2019 2023) Pseudoliparis swirei GCF_029220125.1_NWPU_hadal_v1 200 626,455,521 974 874,774 37.78
483 Mediterranean sand smelt (2025) Atherina hepsetus GCA_977020125.1_fAthHes1.1 133 1,033,458,085 254 27,600 38.78
484 megrim (2025) Lepidorhombus whiffiagonis GCA_965246675.1_fLepWhi1.1 33 540,570,312 40 4,400 27.10
485 Mexican tetra (2017 WashU) Astyanax mexicanus GCF_000372685.2_Astyanax_mexicanus-2.0 2,415 1,335,239,194 621 43,642,769 42.58
486 Mexican tetra (ESR-SI-001 2022 genbank) Astyanax mexicanus GCA_023375975.1_AstMex3_surface 109 1,373,169,186 14 7,000 52.51
487 Mexican tetra (ESR-SI-001 2022 refseq) Astyanax mexicanus GCF_023375975.1_AstMex3_surface 109 1,373,169,186 14 7,000 47.33
488 Mexican tetra (Pach_M1 Pachon cave 2021) Astyanax mexicanus GCA_019721115.1_AMEX_1.1 195 1,378,811,567 334 165,606 47.76
489 Midas cichlid (2014) Amphilophus citrinellus GCA_000751415.1_Midas_v5 6,637 844,902,565 617,558 60,366,222 25.16
490 milkfish (2019) Chanos chanos GCF_902362185.1_fChaCha1.1 31 656,929,047 112 4,230,332 26.35
491 milkfish (alternate hap 2019) Chanos chanos GCA_902362175.1_fChaCha1.1_alternate_haplotype 1,937 637,484,823 3 700 26.50
492 milkfish (primary hap 2019) Chanos chanos GCA_902362185.1_fChaCha1.1 30 656,912,816 111 4,230,331 26.35
493 minispotted lanternfish (alternate hap 2023) Gymnoscopelus microlampas GCA_963454925.1_fGymMic1.1_alternate_haplotype 7,669 1,278,893,940 3 600 55.33
494 minispotted lanternfish (primary hap 2023 genbank) Gymnoscopelus microlampas GCA_963454915.1_fGymMic1.1 374 1,318,656,016 1,398 279,600 47.09
495 minispotted lanternfish (primary hap 2023 refseq) Gymnoscopelus microlampas GCF_963454915.1_fGymMic1.1 374 1,318,656,016 1,398 279,600 56.17
496 monkeyface prickleback (CVI_PGR_0920_01 alternate hap 2022) Cebidichthys violaceus GCA_023349535.1_fCebVio1.0.a 486 606,177,218 927 92,700 27.32
497 monkeyface prickleback (CVI_PGR_0920_01 primary hap 2022 genbank) Cebidichthys violaceus GCA_023349555.1_fCebVio1.0.p 725 575,660,146 936 93,600 27.15
498 monkeyface prickleback (CVI_PGR_0920_01 primary hap 2022 refseq) Cebidichthys violaceus GCF_023349555.1_fCebVio1.0.p 724 575,643,635 936 93,600 27.15
499 Montagu's blenny (2025) Coryphoblennius galerita GCA_965229965.1_fCorGal2.1 77 775,345,180 483 52,600 34.99
500 Monterrey platyfish Xiphophorus couchianus GCF_001444195.1_X_couchianus-1.0 68 688,541,509 229 1,031,462 28.28
501 mormyrid electric fish (MSU_618 2025) Paramormyrops kingsleyae GCF_048594095.1_PKINGS_0.4 407 933,939,706 249 24,900 29.37
502 mother-of-pearl pipefish (UIUO_Vmar 2025) Vanacampus margaritifer GCF_051991255.1_RoL_Vmar_1.0 213 628,116,969 67 1,340 44.26
503 mulloway (RH1 2020) Argyrosomus japonicus GCA_015710095.1_ASM1571009v1 1,984 791,960,397 0 0 28.94
504 mummichog (Maine) Fundulus heteroclitus GCF_000826765.1_Fundulus_heteroclitus-3.0.2 10,180 1,021,898,560 123,625 89,424,232 26.05
505 mummichog (U. Missouri) Fundulus heteroclitus GCF_011125445.2_MU-UCD_Fhet_4.1 1,031 1,203,505,739 2,820 1,407,874 33.01
506 mutto hamlet (2026) Alphestes afer GCA_977120785.1_fAlpAfe1.1 87 1,004,081,665 21 2,500 49.08
507 New Zealand spotty (alternate hap 2019 genbank) Notolabrus celidotus GCA_009762545.1_fNotCel1.alt 3,286 770,553,912 0 0 33.61
508 New Zealand spotty (primary hap 2019 genbank) Notolabrus celidotus GCA_009762535.1_fNotCel1.pri 468 846,760,650 1,135 14,268,481 33.39
509 New Zealand spotty (primary hap refseq) Notolabrus celidotus GCF_009762535.1_fNotCel1.pri 467 846,744,125 1,135 14,268,481 33.39
510 Nile tilapia Oreochromis niloticus GCF_001858045.2_O_niloticus_UMD_NMBU 2,460 1,005,681,550 551 55,001 31.17
511 Nilsson's pipefish (2025) Syngnathus rostellatus GCA_965643225.1_fSynRos1.1 77 378,829,410 74 8,000 38.29
512 ninespine stickleback (alternate hap 2023) Pungitius pungitius GCA_949316245.1_fPunPun2.1_alternate_haplotype 1,934 413,337,341 0 0 27.13
513 ninespine stickleback (NSP_V7 2020) Pungitius pungitius GCF_902500615.1_NSP_V7 1,667 466,599,196 341 34,100 25.74
514 ninespine stickleback (primary hap 2023 genbank) Pungitius pungitius GCA_949316345.1_fPunPun2.1 175 480,450,674 738 147,600 28.40
515 ninespine stickleback (primary hap 2023 refseq) Pungitius pungitius GCF_949316345.1_fPunPun2.1 174 480,434,100 738 147,600 28.40
516 North African catfish (Netherlands MV-2021 2022) Clarias gariepinus GCF_024256425.1_CGAR_prim_01v2 48 969,620,777 0 0 44.81
517 North African catfish (Netherlands MV-2021 alternate hap 2022) Clarias gariepinus GCA_024256465.1_CGAR_Hap2 98 954,244,515 115 140,152 38.53
518 North African catfish (Netherlands MV-2021 primary hap 2022) Clarias gariepinus GCA_024256435.1_CGAR_Hap1 119 972,641,408 180 8,515 39.05
519 northern cavefish (hap1 2024) Amblyopsis spelaea GCA_046255685.1_fAmbSpe1.hap1 892 817,459,139 466 93,200 49.51
520 northern cavefish (hap2 2024) Amblyopsis spelaea GCA_046255725.1_fAmbSpe1.hap2 667 865,090,090 484 96,800 52.00
521 northern pike Esox lucius GCF_004634155.1_Eluc_v4 811 940,906,975 584 58,400 33.32
522 northern pike (alternate hap 2020) Esox lucius GCA_011004835.1_fEsoLuc1.alt 3,813 622,571,242 11 417,274 31.83
523 northern pike (primary hap 2020 refseq) Esox lucius GCF_011004845.1_fEsoLuc1.pri 53 918,748,614 112 1,022,735 32.97
524 northern snakehead (prfri 2023) Channa argus GCF_033026475.1_Channa_argus_male_v1.0 291 675,473,700 52 2,546 29.41
525 ocellated dragonet (captive hap1 2024) Neosynchiropus ocellatus GCA_044231665.1_SynOce1_v1.hap1 107 470,091,028 99 9,900 21.06
526 ocellated dragonet (captive hap2 2024) Neosynchiropus ocellatus GCA_044231645.1_SynOce1_v1.hap2 129 471,984,592 111 11,100 21.93
527 Old Calabar mormyrid (PKING1 2018) Paramormyrops kingsleyae GCF_002872115.1_PKINGS_0.1 4,666 799,417,351 49,579 63,880,082 20.88
528 old wife (hap1 2024) Enoplosus armatus GCA_043641665.1_fEnoArm2.hap1 135 579,881,259 114 22,500 24.58
529 old wife E.armatus (hap1 2024) Enoplosus armatus GCF_043641665.1_fEnoArm2.hap1 136 579,897,767 114 22,500 23.12
530 old wife E.armatus (hap2 2024) Enoplosus armatus GCA_043640875.1_fEnoArm2.hap2 94 578,326,983 100 19,800 22.89
531 orangethroat darter Etheostoma spectabile GCF_008692095.1_UIUC_Espe_1.0 3,119 854,806,606 101,221 4,031,177 31.23
532 orbiculate cardinalfish (alternate hap 2019) Sphaeramia orbicularis GCA_902148825.1_fSphaOr1.1_alternate_haplotype 6,896 1,135,435,641 142 630,303 45.58
533 orbiculate cardinalfish (primary hap 2019 genbank) Sphaeramia orbicularis GCA_902148855.1_fSphaOr1.1 340 1,342,662,642 1,844 3,566,081 48.65
534 orbiculate cardinalfish (primary hap 2019 refseq) Sphaeramia orbicularis GCF_902148855.1_fSphaOr1.1 340 1,342,662,642 1,844 3,566,081 48.65
535 oriental weatherfish (2024) Misgurnus anguillicaudatus GCF_027580225.2_ASM2758022v2 61 1,120,313,161 110 55,000 45.48
536 oriental weatherfish (BS_2022a 2023) Misgurnus anguillicaudatus GCF_027580225.1_HAU_Mang_1.0 358 1,104,586,043 614 61,301 45.73
537 Osbeck's grenadier anchovy (Shantou hap1 2025) Coilia mystus GCA_048544215.1_fCoiMys1.hap1 180 803,134,922 1,177 117,700 38.65
538 Osbeck's grenadier anchovy (Shantou hap2 2025) Coilia mystus GCA_048544225.1_fCoiMys1.hap2 184 854,254,650 1,132 113,200 38.31
539 oyster pompano (Australia AG129_WGS33_773 2025) Trachinotus anak GCF_046630095.1_CSIRO_AGI_Tana_v1 150 665,989,892 0 0 24.79
540 P.nyererei 1_Seehausen Pundamilia nyererei GCF_000239375.1_PunNye1.0 7,233 830,129,318 60,817 131,372,167 20.67
541 Pacific bluefin tuna (20180606_amami#17_male 2023) Thunnus orientalis GCA_021601225.2_Tori_3.1 580 791,677,880 269 26,444 32.22
542 Pacific cod (2023) Gadus macrocephalus GCF_031168955.1_ASM3116895v1 24 555,697,652 4,826 482,163 38.54
543 Pacific halibut (PH-IPHC-18 2020) Hippoglossus stenolepis GCF_013339905.1_IPHC_HiSten_1.0 120 594,145,200 219 21,900 25.27
544 Pacific halibut (QCI-W04-F060 2022) Hippoglossus stenolepis GCF_022539355.2_HSTE1.2 53 602,165,188 1,131 325,822 24.80
545 Pacific saury (AMF1-May2022 2023) Cololabis saira GCF_033807715.1_fColSai1.1 759 1,146,362,327 900 450,000 44.02
546 painted comber (2026) Serranus scriba GCA_977118025.1_fSerScr1.1 254 924,817,704 33 4,900 41.69
547 panther danio (primary hap 2020) Danio aesculapii GCF_903798145.1_fDanAes4.1 342 1,381,485,597 1,821 16,316,683 56.15
548 paradise fish (MV0001 2023) Macropodus opercularis GCA_030770545.1_macOpe2 152 483,077,705 0 0 24.67
549 parallel lanternfish (alternate hap 2024) Protomyctophum parallelum GCA_964188415.1_fProPar1.1_alternate_haplotype 23 1,013,731,500 4,955 991,000 46.52
550 parallel lanternfish (primary hap 2024 genbank) Protomyctophum parallelum GCA_964188405.1_fProPar1.1 24 1,235,328,005 2,729 545,800 48.26
551 parallel lanternfish (primary hap 2024 refseq) Protomyctophum parallelum GCF_964188405.1_fProPar1.1 24 1,235,328,005 2,729 545,800 59.19
552 Patagonian blennie (Puerto Natales JMC-PN-2008 2024) Eleginops maclovinus GCF_036324505.1_JC_Emac_rtc_rv5 27 606,306,633 380 190,000 25.60
553 pearlfish (2026) Carapus acus GCA_984795795.1_fCarAcu1.1 57 466,342,956 8 800 32.17
554 pejerrey (fOdoBon6 haplotype 2 2023) Odontesthes bonariensis GCA_027942885.1_fOdoBon6.hap2 334 974,945,057 135 67,500 36.86
555 pejerrey (hap1 2023 genbank) Odontesthes bonariensis GCA_027942865.1_fOdoBon6.hap1 189 945,823,896 282 91,800 35.17
556 pejerrey (hap1 2023 refseq) Odontesthes bonariensis GCF_027942865.1_fOdoBon6.hap1 189 945,823,896 282 91,800 35.17
557 peladilla (fAplTae1 alternate hap 2021) Aplochiton taeniatus GCA_017639685.1_fAplTae1.alt 5,690 560,414,924 11 839 28.85
558 peladilla (primary hap 2021) Aplochiton taeniatus GCA_017639675.1_fAplTae1.pri 41 461,946,147 1,158 8,155,958 27.72
559 pencil smelt (primary hap 2024) Nansenia antarctica GCF_963989245.1_fNanAnt1.1 1,177 1,085,794,659 3,299 659,800 48.79
560 pencil smelt N.antarctica (alternate hap 2024) Nansenia antarctica GCA_963989255.1_fNanAnt1.1_alternate_haplotype 8,937 1,005,279,045 35 7,000 47.24
561 pencil smelt N.antarctica (primary hap 2024) Nansenia antarctica GCA_963989245.1_fNanAnt1.1 1,177 1,085,794,659 3,299 659,800 48.79
562 picturesque dragonet (SynPic1 hap1 2024) Synchiropus picturatus GCA_044231685.1_ASM4423168v1 355 500,467,214 122 12,200 25.26
563 picturesque dragonet (SynPic1 hap2 2024) Synchiropus picturatus GCA_044231675.1_ASM4423167v1 300 492,062,741 100 10,000 24.57
564 pike-perch Sander lucioperca GCF_008315115.2_SLUC_FBN_1.2 337 901,238,333 711 194,059 36.52
565 pinecone soldierfish (alternate hap 2019) Myripristis murdjan GCA_902148815.1_fMyrMur1.1_alternate_haplotype 2,193 819,084,930 6 688 27.94
566 pinecone soldierfish (primary hap 2019 genbank) Myripristis murdjan GCA_902150065.1_fMyrMur1.1 87 835,254,674 253 1,865,832 28.16
567 pinecone soldierfish (primary hap 2019 refseq) Myripristis murdjan GCF_902150065.1_fMyrMur1.1 87 835,254,674 253 1,865,832 28.16
568 pink cusk-eel (Tasmania CSIRO-AG114 2024) Genypterus blacodes GCF_046128005.1_CSIRO-AGI_Gbla_v1 598 463,765,610 0 0 26.53
569 pink salmon Oncorhynchus gorbuscha GCF_021184085.1_OgorEven_v1.0 19,028 2,690,283,663 5,213 1,188,012 57.36
570 pinktail triggerfish (hap1 2026) Melichthys vidua GCA_984657235.1_Melichthys_vidua_haplotype_1_assembly 331 630,755,792 90 18,000 28.76
571 pinktail triggerfish (hap2 2026) Melichthys vidua GCA_984655525.1_Melichthys_vidua_haplotype_2_assembly 121 641,978,102 107 21,000 30.35
572 pipefish (2026) Leptonotus elevatus GCF_054856555.1_RoL_Lele_1.0 297 601,228,900 171 3,420 42.36
573 plate fish (2026) Bothus lunatus GCA_982266815.1_fBotLun1.1 25 555,807,845 10 1,900 28.55
574 ploughfish Gymnodraco acuticeps GCF_902827175.1_fGymAcu1.1 2,618 996,888,495 1,569 192,604 45.12
575 pointed-snout wrasse (2026) Symphodus rostratus GCA_982582535.1_fSymRos1.1 71 644,475,757 458 53,200 28.06
576 pollack (alternate hap 2023) Pollachius pollachius GCA_949987605.1_fPolPol2.1_alternate_haplotype 4,970 591,893,695 0 0 33.27
577 pollack (primary hap 2023) Pollachius pollachius GCA_949987615.1_fPolPol2.1 616 606,767,444 1,810 362,000 33.80
578 pond loach (2024) Paramisgurnus dabryanus GCF_030506205.2_PD_genome_1.1 220 1,043,485,661 1,120 224,000 44.67
579 pouting (hap1.1 2025) Trisopterus luscus GCA_976225255.1_fTriLus1.hap1.1 2,153 548,567,887 3,045 609,000 36.04
580 pouting (hap2.1 2025) Trisopterus luscus GCA_976225395.1_fTriLus1.hap2.1 1,704 529,862,677 2,841 568,200 36.53
581 predatory carp (Z2021 2022) Chanodichthys erythropterus GCF_024489055.1_ASM2448905v1 51 1,085,526,929 181 18,100 61.41
582 prehistoric monster fish (2019 refseq) Thalassophryne amazonica GCF_902500255.1_fThaAma1.1 464 2,446,592,878 2,554 12,594,266 59.92
583 prehistoric monster fish (alternate hap 2019) Thalassophryne amazonica GCA_902500245.1_fThaAma1.1_alternate_haplotype 19,579 1,767,810,094 8 248 58.58
584 puddingwife wrasse (2026) Halichoeres radiatus GCA_977964395.1_fHalRad1.1 80 818,519,959 262 30,000 34.21
585 rainbow cale (hap1 2026) Heteroscarus acroptilus GCA_056506875.1_fHetAcr1.hap1 152 683,727,904 80 16,000 28.66
586 rainbow cale (hap2 2026) Heteroscarus acroptilus GCA_056506865.1_fHetAcr1.hap2 84 681,452,074 81 15,500 28.89
587 rainbow smelt (alternate hap 2024) Osmerus mordax GCA_038355625.1_fOsmMor3.standard.alt 7,757 420,089,129 0 0 33.46
588 rainbow smelt (primary hap 2024 genbank) Osmerus mordax GCA_038355195.1_fOsmMor3.pri 365 497,673,479 1,907 364,200 35.25
589 rainbow smelt (primary hap 2024 refseq) Osmerus mordax GCF_038355195.1_fOsmMor3.pri 366 497,690,099 1,907 364,200 35.24
590 rainbow trout (Arlee) Oncorhynchus mykiss GCF_013265735.2_USDA_OmykA_1.1 743 2,341,688,614 486 6,184,519 53.80
591 rainbow trout (Swanson) Oncorhynchus mykiss GCF_002163495.1_Omyk_1.0 131,961 2,178,999,613 427,894 251,515,894 44.07
592 Rankin cod (hap1 2025) Epinephelus rankini GCA_048129235.1_fEpiMut1.hap1.cur.20240206 386 1,035,398,499 21 4,200 31.27
593 Rankin cod (hap2 2025) Epinephelus rankini GCA_048129065.1_fEpiMut1.hap2.cur.20240206 199 1,018,963,042 33 6,400 42.18
594 ray-finned fishes (hap1 2026) Neatypus obliquus GCA_984650095.1_Neatypus_obliquus_haplotype_1_assembly 140 739,127,349 8 1,600 29.59
595 ray-finned fishes (hap2 2026) Neatypus obliquus GCA_984647745.1_Neatypus_obliquus_haplotype_2_assembly 124 740,656,808 19 3,800 29.54
596 ray-finned fishes Aulonocara sp. 'chitande type north' Nkhata Bay (2026) Aulonocara sp. 'chitande type north' Nkhata Bay GCF_057382095.1_A_spYH_male_GT1.1 67 972,169,565 155 3,790,343 41.41
597 ray-finned fishes Copadichromis virginalis (Utaka Kocher_CV1m 2026) Copadichromis virginalis GCF_057382275.1_C_Virginalis_male_GT1.1 27 946,462,903 178 4,066,907 42.73
598 ray-finned fishes Diplotaxodon limnothrissa (DT_005_m 2026) Diplotaxodon limnothrissa GCF_057381915.1_D_limnothrissa_male_GT1.1 34 952,596,937 179 4,511,907 43.52
599 ray-finned fishes Mchenga conophoros (2026) Mchenga conophoros GCF_057382185.1_M_conophoros_male_GT1.1 33 961,731,750 606 3,423,211 43.13
600 ray-finned fishes Multies Rhamphochromis sp. 'chilingali' (primary hap 2024) Rhamphochromis sp. 'chilingali' GCF_963969265.1_fRhaChi2.1 82 921,184,210 422 84,400 39.53
601 ray-finned fishes Neolamprologus multifasciatus (primary hap 2024) Neolamprologus multifasciatus GCF_963576455.1_fNeoMul1.2 76 858,770,123 260 44,416 33.58
602 razorback sucker (HMW12.3.18 2022) Xyrauchen texanus GCF_025860055.1_RBS_HiC_50CHRs 1,746 2,186,823,573 1,873 936,500 51.92
603 red bandfish (hap1.1 2026) Cepola macrophthalma GCA_978015445.1_fCepMac1.hap1.1 738 586,180,920 533 106,600 35.94
604 red bandfish (hap2.1 2026) Cepola macrophthalma GCA_978015425.1_fCepMac1.hap2.1 544 575,962,900 532 106,400 35.55
605 red drum (XU1910 2020) Sciaenops ocellatus GCA_014183145.1_ASM1418314v1 34,462 684,633,790 11,577 30,266,824 23.28
606 red lionfish (2025) Pterois volitans GCA_977110895.1_fPteVol1.1 36 908,186,800 71 7,800 44.57
607 red scorpionfish (2026) Scorpaena scrofa GCA_982374735.1_fScoScr1.1 35 1,168,912,182 69 8,600 49.16
608 red seabream (2024 genbank) Pagrus major GCA_040436345.1_Pma_NU_1.0 24 785,972,034 278 27,800 34.90
609 red seabream (2024 refseq) Pagrus major GCF_040436345.1_Pma_NU_1.0 25 785,989,065 278 27,800 27.02
610 red shiner (fCypLut1hap1 2026) Cyprinella lutrensis GCA_054825075.1_fCypLut1.hap1 456 926,985,129 835 167,000 54.24
611 red shiner (fCypLut1hap2 2026) Cyprinella lutrensis GCA_054825065.1_fCypLut1.hap2 390 892,624,304 821 164,200 53.32
612 red-bellied piranha (fPygNat1 alternate hap 2020) Pygocentrus nattereri GCA_015220065.1_fPygNat1.alt 1,751 289,313,524 0 0 49.72
613 red-bellied piranha (Pna-1 2016) Pygocentrus nattereri GCF_001682695.1_Pygocentrus_nattereri-1.0.2 283,518 1,285,352,492 62,964 33,286,579 34.80
614 red-bellied piranha (primary hap 2020 genbank) Pygocentrus nattereri GCA_015220715.1_fPygNat1.pri 56 1,222,067,157 303 10,159,184 35.79
615 red-bellied piranha (primary hap 2020 refseq) Pygocentrus nattereri GCF_015220715.1_fPygNat1.pri 55 1,222,050,449 303 10,159,184 35.79
616 redfish (Tasmania AG114_WGS23_722 - 3 2025) Centroberyx affinis GCF_046629955.1_CSIRO-AGI_Caff_v1 6,232 774,638,115 0 0 30.21
617 redstripe bigeye (hap1 2026) Pristigenys meyeri GCA_056506805.1_fPriMey1.hap1 127 833,899,124 82 16,400 48.00
618 redstripe bigeye (hap2 2026) Pristigenys meyeri GCA_056506795.1_fPriMey1.hap2 84 839,101,591 71 14,200 47.97
619 reedfish (2021) Erpetoichthys calabaricus GCF_900747795.2_fErpCal1.3 169 3,613,551,144 1,431 29,707,657 47.53
620 reedfish (v1 alternate hap 2019) Erpetoichthys calabaricus GCA_900700845.2_fErpCal1.1_alternate_haplotype 38,593 2,607,661,443 5 52,479 45.67
621 Rhinogobio nasutus (DBWJ_T2T 2025) Rhinogobio nasutus GCA_048301585.1_ASM4830158v1 70 953,377,980 2 200 45.29
622 ringed pipefish (RoL2022-P2 2023) Dunckerocampus dactyliophorus GCF_027744805.1_RoL_Ddac_1.1 157 670,648,883 14 280 41.09
623 Rio pearlfish (hap1 2026) Nematolebias whitei GCA_059746955.1_fNemWhi1.hap1 443 1,421,574,368 344 68,800 57.27
624 Rio pearlfish (hap2 2026) Nematolebias whitei GCA_059746975.1_fNemWhi1.hap2 285 1,403,877,059 324 64,800 56.84
625 Rio pearlfish (Nwh7 v2 2021) Nematolebias whitei GCF_014905685.2_NemWhi1 18,998 1,218,316,901 100,521 97,663,390 42.85
626 river trout (v2 2021) Salmo trutta GCA_901001165.2_fSalTru1.2 1,441 2,371,880,186 3,941 73,600,705 55.89
627 roach minnow (alternate hap 2023) Rutilus rutilus GCA_951802655.1_fRutRut2.1_alternate_haplotype 4,606 1,042,711,183 6 1,200 48.42
628 roach minnow (primary hap 2023 genbank) Rutilus rutilus GCA_951802725.1_fRutRut2.1 85 1,100,195,650 471 94,200 49.02
629 roach minnow (primary hap 2023 refseq) Rutilus rutilus GCF_951802725.1_fRutRut2.1 84 1,100,179,043 471 94,200 56.90
630 rock goby (2025) Gobius paganellus GCA_965278345.2_fGobPag3.1 123 831,875,733 76 8,200 43.20
631 rock gunnel (alternate hap 2021) Pholis gunnellus GCA_910591705.2_fPhoGun1.2_alternate_haplotype 2,165 590,303,236 1 500 25.85
632 rock gunnel (primary hap 2021 genbank) Pholis gunnellus GCA_910591455.2_fPhoGun1.2 101 588,696,950 418 137,000 25.63
633 rock gunnel (primary hap 2021 refseq) Pholis gunnellus GCF_910591455.1_fPhoGun1.2 100 588,680,419 418 137,000 25.31
634 rohu (BAU-BD-2019 2022) Labeo rohita GCF_022985175.1_IGBB_LRoh.1.0 2,870 1,126,558,565 5,144 181,047,225 41.98
635 Rosablanca catfish (hap2 2023) Trichomycterus rosablanca GCA_030015355.1_fTriRos1.hap2 302 996,754,446 192 38,400 48.41
636 rouch bullseye (RE-2024b hap1 2024 refseq) Pempheris klunzingeri GCF_042242105.1_fPemKlu1.hap1 441 646,252,061 87 17,200 24.57
637 rough bullseye (RE-2024b hap2 2024) Pempheris klunzingeri GCA_042242125.1_fPemKlu1.hap2 84 632,781,980 93 18,300 30.94
638 rudd (Europe DD20220513a primary hap 2022) Scardinius erythrophthalmus GCA_024453875.1_ASM2445387v1 110 1,135,838,337 418 88,160 49.98
639 rudd (fScaEry2.hap1.1 2024) Scardinius erythrophthalmus GCA_964197995.1_fScaEry2.hap1.1 755 1,229,666,150 836 167,200 51.27
640 rudd (hap1.2 2026) Scardinius erythrophthalmus GCA_964197995.2_fScaEry2.hap1.2 753 1,229,592,076 836 167,200 66.89
641 rudd (hap2.2 2026) Scardinius erythrophthalmus GCA_964198005.2_fScaEry2.hap2.2 449 1,189,974,144 910 182,000 66.28
642 Russell's snapper (6 fLutRus1fLutRus1.hap1.cur.20230702 2026) Lutjanus russellii GCA_059550235.1_fLutRus1.hap1.cur.20230702 491 1,044,625,505 514 102,400 30.77
643 Russell's snapper (6 fLutRus1fLutRus1.hap2.cur.20230702 2026) Lutjanus russellii GCA_059550165.1_fLutRus1.hap2.cur.20230702 256 1,038,571,789 472 94,200 30.39
644 sablefish (Golden Eagle Sablefish UVic2021 2023) Anoplopoma fimbria GCF_027596085.1_Afim_UVic_2022 7,493 653,543,715 723 71,904 28.31
645 sailfin molly Poecilia latipinna GCF_001443285.1_P_latipinna-1.0 17,986 815,142,410 41,735 135,369,525 22.54
646 salamanderfish (hap1 2025) Lepidogalaxias salamandroides GCA_049190665.1_fLepSal2.hap1 2,987 735,065,728 1,365 269,000 44.00
647 salamanderfish (hap2 2025) Lepidogalaxias salamandroides GCA_049190655.1_fLepSal2.hap2 1,559 742,016,821 1,366 270,100 45.23
648 salema (2025) Sarpa salpa GCA_977007045.1_fSarSal1.1 35 782,240,472 64 6,900 34.69
649 sand goby (2025) Pomatoschistus minutus GCA_965276375.1_fPomMin1.1 106 861,176,092 386 43,900 46.56
650 sand smelt (2025) Atherina presbyter GCA_965295175.1_fAthPre1.1 127 1,040,595,279 212 21,700 38.93
651 sansaifugu (HTHZ2018 2019) Takifugu flavidus GCF_003711565.1_ASM371156v2 868 366,303,280 250 24,406 21.67
652 sardine (primary hap 2023 genbank) Sardina pilchardus GCA_963854185.1_fSarPil1.1 241 869,414,035 1,654 330,800 37.59
653 sardine (primary hap 2023 refseq) Sardina pilchardus GCF_963854185.1_fSarPil1.1 240 869,396,467 1,654 330,800 37.59
654 scaldfish (2025) Arnoglossus laterna GCA_965260895.1_fArnLat1.1 368 497,693,160 1,032 109,100 34.50
655 scribbled pipefish (RoL2023-P3 2023) Corythoichthys intestinalis GCF_030265065.1_ASM3026506v1 109 1,326,793,283 9 180 63.96
656 sea stickleback (SK-2024b hap1 2025) Spinachia spinachia GCA_048126635.1_SpiSpi1_v1.hap1 38 407,561,107 241 24,100 22.91
657 sea stickleback (SK-2024b hap2 2025) Spinachia spinachia GCA_048127205.1_SpiSpi1_v1.hap2 52 406,020,468 276 27,600 23.19
658 Senegalese sole Solea senegalensis GCF_019176455.1_IFAPA_SoseM_1 1,937 603,535,267 662 65,441 28.32
659 sergeant major (2026) Abudefduf saxatilis GCA_977929305.1_fAbuSax1.1 66 793,691,323 71 12,000 30.27
660 shanny (alternate hap 2023) Lipophrys pholis GCA_963383635.1_fLipPho2.1_alternate_haplotype 3,846 738,669,690 1 34 28.51
661 shanny (alternate hap 2026) Lipophrys pholis GCA_963383635.2_fLipPho2.2_alternate_haplotype 3,846 738,669,690 1 34 28.51
662 shanny (primary hap 2023 genbank) Lipophrys pholis GCA_963383615.1_fLipPho2.1 847 768,243,328 598 119,616 29.07
663 shanny (primary hap 2023 refseq) Lipophrys pholis GCF_963383615.1_fLipPho2.1 847 768,243,328 598 119,616 29.07
664 shanny (primary hap 2026) Lipophrys pholis GCA_963383615.2_fLipPho2.2 546 754,776,895 598 119,616 28.77
665 sharptooth jobfish (hap1 2024) Pristipomoides typus GCA_045363895.1_fPriTyp1.hap1 283 1,147,302,341 84 16,600 35.20
666 sharptooth jobfish (hap2 2024) Pristipomoides typus GCA_045363885.1_fPriTyp1.hap2 172 1,146,345,582 76 15,100 35.15
667 sheepshead minnow Cyprinodon variegatus GCF_000732505.1_C_variegatus-1.0 9,259 1,035,184,475 113,210 135,655,219 27.50
668 short-snouted seahorse (2025) Hippocampus hippocampus GCA_965263715.1_fHipHio1.1 50 452,196,560 70 7,800 33.80
669 shortfin molly Poecilia mexicana GCF_001443325.1_P_mexicana-1.0 18,102 801,710,366 37,507 121,884,386 22.83
670 shorthorn sculpin (2025) Myoxocephalus scorpius GCA_977012325.1_fMyoSco2.1 44 708,095,533 109 11,800 35.02
671 shorthorn sculpin (fMyoSco1hap1 2026) Myoxocephalus scorpius GCA_054668685.1_fMyoSco1.hap1 53 726,372,094 546 109,200 35.69
672 shorthorn sculpin (fMyoSco1hap2 2026) Myoxocephalus scorpius GCA_054668615.1_fMyoSco1.hap2 50 710,167,951 525 105,000 34.80
673 shortstripe goby (2026) Elacatinus chancei GCA_978163275.1_fElaCha1.1 144 944,324,776 211 25,600 40.36
674 Siamese fighting fish (primary hap 2023) Betta splendens GCA_900634795.4_fBetSpl5.4 35 426,984,265 321 31,466 23.21
675 Siamese fighting fish (v1 alternate hap 2019) Betta splendens GCA_900651605.1_fBetSpl5.1_alternate_haplotype 3,705 426,643,682 2 125 22.60
676 Siamese fighting fish (v4 primary hap 2023) Betta splendens GCF_900634795.4_fBetSpl5.4 36 427,001,245 321 31,466 23.21
677 Siamese fighting fish (v5.4 alternate hap 2023) Betta splendens GCA_900651605.2_fBetSpl5.4_alternate_haplotype 3,764 441,035,931 108 2,919 23.26
678 silver carp (IHB0807247 2022) Hypophthalmichthys molitrix GCA_022817975.1_1.0 47,685 825,236,645 65,388 37,441,584 45.25
679 silver crucian carp (wild population from Czech Republic Cgi1373 2022) Carassius gibelio GCF_023724105.1_carGib1.2-hapl.c 51 1,583,351,535 2,597 1,296,088 45.06
680 silver spinyfin (hap1 2025) Diretmus argenteus GCA_048569125.1_fDirArg3.hap1 5,504 1,517,026,147 3,365 666,800 54.21
681 silver spinyfin (hap2 2025) Diretmus argenteus GCA_048569135.1_fDirArg3.hap2 4,595 1,884,132,620 3,473 694,419 55.04
682 silverbelly (hap1 2026) Parequula melbournensis GCA_984656905.1_Parequula_melbournensis_haplotype_1_assembly 335 602,936,613 337 67,200 29.89
683 silverbelly (hap2 2026) Parequula melbournensis GCA_984657205.1_Parequula_melbournensis_haplotype_2_assembly 293 629,333,319 326 64,900 32.13
684 slender sunfish (hap1 2026) Ranzania laevis GCA_056748195.1_fRanLae1.hap1 245 608,623,193 134 26,600 26.69
685 slender sunfish (hap2 2026) Ranzania laevis GCA_056748185.1_fRanLae1.hap2 132 580,963,229 106 21,100 23.57
686 slender-spined porcupine fish (hap1 2026) Diodon nicthemerus GCA_984752085.1_Diodon_nicthemerus_haplotype_1_assembly 224 855,561,038 50 7,500 35.35
687 slender-spined porcupine fish (hap2 2026) Diodon nicthemerus GCA_984754035.1_Diodon_nicthemerus_haplotype_2_assembly 154 851,812,295 54 8,300 35.35
688 slippery dick (2026) Halichoeres bivittatus GCA_977929225.1_fHalBiv1.1 95 843,002,783 142 18,000 34.86
689 small red scorpionfish (2026) Scorpaena notata GCA_978406735.1_fScoNot1.1 33 1,111,146,844 29 3,600 47.37
690 small-headed clingfish (2025) Apletodon dentatus GCA_965542115.1_fAplDen1.1 114 863,952,356 68 9,500 45.01
691 smalleye Pacific opah (hap1 2023) Lampris incognitus GCA_029633845.1_fLamInc1.hap1 1,059 1,477,069,270 3,120 623,912 53.60
692 smalleye Pacific opah (hap2 2023 refseq) Lampris incognitus GCF_029633865.1_fLamInc1.hap2 544 1,482,357,630 3,115 622,730 53.30
693 smallmouth bass Micropterus dolomieu GCF_021292245.1_ASM2129224v1 15,020 829,587,215 34,581 3,005,762 28.32
694 smooth sandeel (2025) Gymnammodytes semisquamatus GCA_965653945.1_fGymSem1.1 182 723,397,971 244 27,600 38.06
695 smooth trunkfish (2025) Rhinesomus triqueter GCA_977090075.1_fRhiTri1.1 105 846,532,836 45 5,700 33.05
696 snake pipefish (RoL-2023_Sb 2023) Entelurus aequoreus GCF_033978785.1_RoL_Eaeq_v1.1 424 1,892,198,045 2,564 51,280 67.28
697 snook (hap1 2025) Sphyraena novaehollandiae GCA_050436885.1_fSphNov1.hap1.cur.20230825 128 607,437,362 132 26,400 24.05
698 snook (hap2 2025) Sphyraena novaehollandiae GCA_050436865.1_fSphNov1.hap2.cur.20230825 76 610,064,789 147 28,800 24.28
699 sobaity seabream (SH-A 2023) Sparidentex hasta GCA_030272975.1_ASM3027297v1 20,388 686,524,723 3,396 251,580 29.19
700 sockeye salmon (On170113-E2 v2 2019) Oncorhynchus nerka GCF_006149115.2_Oner_1.1 34,757 1,925,212,521 25,658 74,077,259 48.61
701 sockeye salmon (Pitt River 2024) Oncorhynchus nerka GCF_034236695.1_Oner_Uvic_2.0 11,378 2,645,636,310 4,351 1,747,557 57.62
702 solenette (alternate hap 2026) Buglossidium luteum GCA_978045325.1_fBugLut1.1_alternate_haplotype 1,135 1,048,491,260 0 0 41.89
703 solenette (primary hap 2026) Buglossidium luteum GCA_978045355.1_fBugLut1.1 654 639,398,791 521 55,300 38.21
704 South Georgia icefish (v2 primary hap 2022) Pseudochaenichthys georgianus GCF_902827115.2_fPseGeo1.2 1,563 1,026,222,745 2,603 1,081,697 45.78
705 southern bluefin tuna (alternate hap 2021) Thunnus maccoyii GCA_910596085.1_fThuMac1.1_alternate_haplotype 895 782,574,410 0 0 33.63
706 southern bluefin tuna (primary hap 2021 refseq) Thunnus maccoyii GCF_910596095.1_fThuMac1.1 58 782,423,979 184 31,592 26.89
707 southern platyfish Xiphophorus maculatus GCF_002775205.1_X_maculatus-5.0-male 102 704,321,165 156 3,327,905 28.29
708 Southwestern China cavefish Sinocyclocheilus anshuiensis GCF_001515605.1_SAMN03320099.WGS_v1.1 85,682 1,632,718,266 168,741 119,821,887 36.99
709 spangled emperor (hap1 2024) Lethrinus nebulosus GCA_045362495.1_fLetNeb1.hap1 226 1,133,212,262 196 38,700 29.01
710 spangled emperor (hap2 2024) Lethrinus nebulosus GCA_045362485.1_fLetNeb1.hap2 151 1,122,130,221 244 47,200 29.19
711 Spanish flag snapper (2 fLutCar1fLutCar1.hap1.cur.20230414 2026) Lutjanus carponotatus GCA_059550285.1_fLutCar1.hap1.cur.20230414 314 1,015,245,965 83 16,600 29.92
712 Spanish flag snapper (2 fLutCar1fLutCar1.hap2.cur.20230414 2026) Lutjanus carponotatus GCA_059550275.1_fLutCar1.hap2.cur.20230414 171 1,010,509,777 83 16,300 29.50
713 sphinx blenny (2025) Aidablennius sphynx GCA_977009285.1_fAidSph1.1 465 634,926,972 776 109,000 29.34
714 spiny chromis (Palm Island Apoly-LR-REF 2022) Acanthochromis polyacanthus GCF_021347895.1_KAUST_Apoly_ChrSc 81 956,771,783 871 74,752 35.47
715 spiny chromis (Palm Islands 2017) Acanthochromis polyacanthus GCF_002109545.1_ASM210954v1 30,414 991,584,656 209,115 148,830,929 22.65
716 spotted green pufferfish (2004) Tetraodon nigroviridis GCA_000180735.1_ASM18073v1 25,773 342,403,326 18,974 30,008,907 18.72
717 Spotted handfish (HB-005 2024) Brachionichthys hirsutus GCF_040956055.2_CSIRO-AGI_Bhir_v1 1,371 406,660,335 1,486 148,600 24.98
718 spotted handfish B.hirsutus (HB-005 2024) Brachionichthys hirsutus GCF_040956055.1_CSIRO-AGI_Bhir_v1 1,370 406,634,837 1,486 148,600 24.98
719 spotted pipefish (UIUO_Sarg 2025) Stigmatopora argus GCF_051989625.1_RoL_Sarg_1.0 233 464,095,202 57 1,140 43.74
720 spotted scat (primary hap 2021) Scatophagus argus GCA_020382885.1_fScaArg1.pri 48 570,802,272 77 1,711,559 21.27
721 spotted scorpionfish (2025) Scorpaena plumieri GCA_977109165.1_fScoPlm1.1 30 1,295,977,282 48 6,800 49.57
722 spotted sea bass (ZS-2023 2023) Lateolabrax maculatus GCA_031216445.1_YSFRI_Lmacu_1.1 109 632,510,465 0 0 26.28
723 spotted tilapia (v1 MD_Pm_ZW 2024) Pelmatolapia mariae GCF_036321145.1_Pm_UMD_F 792 940,981,472 23 1,150 30.76
724 spotted tilapia (v2 MD_Pm_ZW 2024) Pelmatolapia mariae GCF_036321145.2_Pm_UMD_F_2 791 972,201,687 24 1,200 30.69
725 spotted wolffish (MPS153535 2025) Anarhichas minor GCF_050575085.1_ASM5057508v1 328 643,880,946 5 5 28.94
726 starry weever (2026) Trachinus radiatus GCA_978019985.1_fTraRad1.1 115 780,274,681 41 4,400 34.43
727 sterlet (maternal hap 2022 refseq) Acipenser ruthenus GCF_902713425.1_fAciRut3.2_maternal_haplotype 1,731 1,899,810,788 433 86,300 43.22
728 sterlet (v2 paternal hap 2022) Acipenser ruthenus GCA_902713435.2_fAciRut3.2_paternal_haplotype 1,517 1,882,648,115 475 95,000 41.60
729 stippled clingfish (2025) Gobiesox punctulatus GCA_977017485.1_fGobPun1.1 32 556,726,225 77 8,600 33.21
730 stone loach (alternate hap 2022) Barbatula barbatula GCA_947034905.1_fBarBar1.1_alternate_haplotype 2,237 571,749,702 0 0 38.06
731 stone loach (primary hap 2022 genbank) Barbatula barbatula GCA_947034865.1_fBarBar1.1 100 617,663,352 825 165,000 39.89
732 stone loach (primary hap 2022 refseq) Barbatula barbatula GCF_947034865.1_fBarBar1.1 99 617,646,710 825 165,000 40.82
733 stone moroko (DD20220531a primary hap 2022) Pseudorasbora parva GCF_024679245.1_ASM2467924v1 81 1,228,868,788 497 102,560 63.65
734 straightnose pipefish (RoL-2023_Sa 2023) Nerophis ophidion GCF_033978795.1_RoL_Noph_v1.0 473 1,845,757,181 1,172 23,440 67.08
735 striated frogfish (MH-2024 2024) Antennarius striatus GCF_040054535.1_ASM4005453v1 42 548,561,997 18 2,715 29.69
736 striped catfish (fPanHyp1 alternate hap 2022) Pangasianodon hypophthalmus GCA_027382375.1_fPanHyp1.alt 3,274 738,869,872 1 45 37.85
737 striped catfish (primary hap 2022 refseq) Pangasianodon hypophthalmus GCF_027358585.1_fPanHyp1.pri 58 764,974,446 236 3,879,978 37.93
738 striped catfish Indonesia Pangasianodon hypophthalmus GCF_009078355.1_GENO_Phyp_1.0 150 758,973,678 463 175,919 32.50
739 striped catfish Vietnam Pangasianodon hypophthalmus GCF_003671635.1_VN_pangasius 567 715,760,110 23,755 19,239,465 30.11
740 striped panchax (hap1 2026) Aplocheilus lineatus GCA_058223795.1_fAplLin1.hap1 33 595,927,458 74 14,800 32.97
741 striped panchax (hap2 2026) Aplocheilus lineatus GCA_058223775.1_fAplLin1.hap2 28 556,387,543 50 10,000 29.15
742 striped red mullet (hap1.1 2025) Mullus surmuletus GCA_965276695.1_fMulSur1.hap1.1 131 569,117,735 536 58,800 30.29
743 striped red mullet (hap2.1 2025) Mullus surmuletus GCA_965276725.1_fMulSur1.hap2.1 78 564,409,684 508 54,300 29.98
744 striped sea-bass Morone saxatilis GCF_004916995.1_NCSU_SB_2.0 630 598,127,127 73,335 5,158,999 22.76
745 Sumatra barb Puntigrus tetrazona GCF_018831695.1_ASM1883169v1 1,122 730,818,536 5,075 394,129 32.49
746 swallowtail seaperch (2024) Anthias anthias GCA_964269795.2_fAntAnt1.2 66 796,149,257 103 14,500 37.59
747 swamp eel Monopterus albus GCF_001952655.1_M_albus_1.0 20,622 684,144,148 51,257 54,828,134 21.96
748 swordfish Xiphias gladius GCF_016859285.1_ASM1685928v1 1,482 691,780,295 449 224,500 23.97
749 swordfish (wild SHS-SW01 2021) Xiphias gladius GCA_016859285.1_ASM1685928v1 1,482 691,790,571 449 224,500 31.36
750 Tachysurus vachellii (PV-2020 2023) Tachysurus vachellii GCF_030014155.1_HZAU_Pvac_v1 78 692,121,426 291 145,500 35.39
751 tambaqui Colossoma macropomum GCF_904425465.1_Colossoma_macropomum 1,269 1,221,847,006 420 37,940 35.37
752 telmatherina bonti (primary hap 2022) Telmatherina bonti GCF_933228915.1_fTelBon1.1 146 986,039,709 1,329 265,800 40.16
753 thickback sole (alternate hap 2023) Microchirus variegatus GCA_963457655.1_fMicVar1.1_alternate_haplotype 2,058 697,398,261 0 0 39.38
754 thickback sole (primary hap 2023 genbank) Microchirus variegatus GCA_963457635.1_fMicVar1.1 188 724,694,306 454 90,800 40.27
755 thickback sole (primary hap 2023 refseq) Microchirus variegatus GCF_963457635.1_fMicVar1.1 188 724,694,306 454 90,800 41.20
756 thicklip grey mullet (alternate hap 2023) Chelon labrosus GCA_963514105.1_fCheLab1.1_alternate_haplotype 1,967 698,748,450 0 0 29.26
757 thicklip grey mullet (primary hap 2023) Chelon labrosus GCA_963514085.1_fCheLab1.1 363 717,420,143 610 122,000 27.59
758 Thor's scaldfish (alternate hap 2026) Arnoglossus thori GCA_984981535.1_fArnTho1.1_alternate_haplotype 77 481,580,313 290 30,600 31.19
759 Thor's scaldfish (primary hap 2026) Arnoglossus thori GCA_984981365.1_fArnTho1.1 87 495,104,323 260 29,400 31.83
760 threadfin butterflyfish (fChaAug3hap1 2025) Chaetodon auriga GCF_051107435.1_fChaAug3.hap1 187 663,087,921 19 3,000 24.24
761 threadfin butterflyfish (hap1 2025) Chaetodon auriga GCA_051107435.1_fChaAug3.hap1 188 663,104,447 19 3,000 24.24
762 threadfin butterflyfish (hap2 2025) Chaetodon auriga GCA_051107495.1_fChaAug3.hap2 81 644,463,717 23 3,700 23.20
763 three-spined stickleback Gasterosteus aculeatus aculeatus GCF_016920845.1_GAculeatus_UGA_version5 2,937 471,894,361 3,125 3,574,186 21.96
764 three-spined stickleback (fGasAcu3.hap1.1 2024) Gasterosteus aculeatus GCF_964276395.1_fGasAcu3.hap1.1 129 511,138,727 331 66,200 27.34
765 three-spined stickleback (hap1 2024) Gasterosteus aculeatus GCA_964276395.1_fGasAcu3.hap1.1 130 511,155,287 331 66,200 27.34
766 three-spined stickleback (hap2 2024) Gasterosteus aculeatus GCA_964276385.1_fGasAcu3.hap2.1 170 457,351,142 309 61,800 27.07
767 threespot wrasse (MK-OKI-2021-1 2023) Halichoeres trimaculatus GCF_033239565.1_fHalTri1.1 228 849,925,595 117 58,500 33.71
768 tidewater goby (DKJ021-1_F 2022) Eucyclogobius newberryi GCA_026437355.1_fEucNew1.0.hap2 755 913,837,424 894 89,400 47.96
769 tidewater goby (DKJ021-1_Fhap1 2022 refseq) Eucyclogobius newberryi GCF_026437365.1_fEucNew1.0.hap1 821 984,812,078 794 79,400 49.87
770 tiger pipefish (2026) Filicampus tigris GCF_054856515.1_RoL_Ftig_1.0 98 546,169,788 25 500 32.96
771 tiger tail seahorse (QL1 v2 2016) Hippocampus comes GCF_001891065.2_H_comes_QL1_v1.1 32,914 492,131,402 22,977 34,075,199 24.57
772 tigerfish (Rhamphochromis RC_006_pf 2026) Rhamphochromis longiceps GCF_057381845.1_R_longiceps_female_GT1.1 31 976,892,117 282 5,907,114 43.77
773 tompot blenny (2025) Parablennius gattorugine GCA_965278395.1_fParGat1.1 246 768,169,584 731 78,900 32.31
774 tomtate (2025) Haemulon aurolineatum GCA_977014745.1_fHaeAur1.1 86 729,967,414 13 1,500 40.10
775 tongue sole Cynoglossus semilaevis GCF_000523025.1_Cse_v1.0 29,643 470,199,494 33,269 24,157,720 24.84
776 topknot (2025) Zeugopterus punctatus GCA_977007055.1_fZeuPun1.1 121 535,409,667 796 88,200 30.73
777 topmouth culter (CATC2023 2024) Culter alburnus GCA_040182925.1_ASM4018292v1 37 1,052,771,736 31 3,100 56.73
778 torafugu (alternate hap 2019) Takifugu rubripes GCA_901000745.3_fTakRub1.2_alternate_haplotype 2,012 350,016,965 38 625,268 20.31
779 torafugu (fTakRub1.2 2019 refseq) Takifugu rubripes GCF_901000725.2_fTakRub1.2 128 384,126,662 402 3,688,529 20.93
780 torafugu (fTakRub1.3 2021 genbank) Takifugu rubripes GCA_901000725.3_fTakRub1.3 128 384,126,663 402 3,688,529 20.93
781 trahira (v1 hap1 2024 refseq) Hoplias malabaricus GCF_029633855.1_fHopMal1.hap1 598 1,186,371,479 989 65,101,941 37.57
782 trahira (v2 hap1 2024 genbank) Hoplias malabaricus GCA_029633855.2_fHopMal1.hap1 597 1,186,354,877 989 65,101,941 37.57
783 trahira (v2 hap2 2024) Hoplias malabaricus GCA_029633875.2_fHopMal1.hap2 451 1,026,599,506 792 38,873,505 38.80
784 trumpetfish (2025) Aulostomus maculatus GCA_975147505.1_fAulMac2.1 459 722,183,757 45 5,900 30.75
785 trumpetfish (hap1 SK-2024c 2025) Aulostomus maculatus GCA_048301465.1_ASM4830146v1 160 662,945,422 179 17,900 26.05
786 trumpetfish (hap2 SK-2024c 2025) Aulostomus maculatus GCA_048301475.1_ASM4830147v1 248 669,846,493 187 18,700 26.80
787 tub gurnard (fCheLuc1.hap2.1 2025) Chelidonichthys lucerna GCA_965644425.1_fCheLuc1.hap2.1 345 651,581,513 305 61,000 35.90
788 tube-eye (hap1 2026) Stylephorus chordatus GCA_056824485.1_fStyCho2.hap1 3,168 1,171,124,545 2,787 557,400 49.89
789 tube-eye (hap2 2026) Stylephorus chordatus GCA_056824565.1_fStyCho2.hap2 1,782 1,138,063,058 2,741 548,200 50.40
790 turbot (alternate hap 2023) Scophthalmus maximus GCA_963854755.1_fScoMax1.1_alternate_haplotype 2,723 540,345,941 0 0 25.56
791 turbot (primary hap 2023) Scophthalmus maximus GCA_963854745.1_fScoMax1.1 108 550,297,089 805 161,000 25.96
792 turbot (ysfricsl-2021 2022) Scophthalmus maximus GCF_022379125.1_ASM2237912v1 28 538,234,718 0 0 24.37
793 turquoise killifish (GRZ 2015) Nothobranchius furzeri GCF_001465895.1_Nfu_20140520 5,897 1,242,518,059 85,562 385,709,548 27.64
794 turquoise killifish (GRZ-AD 2024) Nothobranchius furzeri GCF_043380555.1_NfurGRZ-RIMD1 304 1,479,202,486 369 71,400 67.93
795 turquoise killifish (MZM-0403 2023) Nothobranchius furzeri GCF_027789165.1_UI_Nfuz_MZM_1.0 2,681 1,513,041,927 3,093 102,568,068 56.57
796 Venezuela gogy (2025) Coryphopterus venezuelae GCA_977063065.1_fCorVen1.1 95 1,143,957,084 93 10,000 44.09
797 walking catfish (CIFAMagur01 2020) Clarias magur GCA_013621035.1_C_magur1.0 3,484 941,297,321 605 469,042 37.15
798 walleye (19-12246 2023) Sander vitreus GCF_031162955.1_sanVit1 685 791,719,691 319 6,358,172 40.95
799 walleye pollock (NIFS_2021 2022) Gadus chalcogrammus GCF_026213295.1_NIFS_Gcha_1.0 168 629,936,721 2,816 281,600 38.86
800 warty frogfish (fAntMac1 alternate hap 2020) Antennarius maculatus GCA_013347815.1_fAntMac1.alt 2,294 530,348,589 0 0 29.49
801 warty frogfish (primary hap 2020) Antennarius maculatus GCA_013358685.1_fAntMac1.pri 155 549,949,511 219 733,384 29.79
802 warty frogfish (primary hap 2026) Antennarius maculatus GCA_013358685.2_fAntMac1.pri 154 549,913,291 219 733,384 29.79
803 western mosquitofish Gambusia affinis GCF_019740435.1_SWU_Gaff_1.0 37 680,166,006 181 17,569,858 26.88
804 western speckled dace (OS25496 2023) Rhinichthys klamathensis goyatoka GCF_029890125.1_OSU_Roscu_1.1 930 1,065,491,053 0 0 48.43
805 westslope cutthroat trout (Uvic-CL-2024 2024) Oncorhynchus clarkii lewisi GCF_045791955.1_UVic_Ocla_1.0 3,266 2,404,487,246 1,381 138,100 54.37
806 White Sands pupfish Cyprinodon tularosa GCF_016077235.1_ASM1607723v1 2,003 1,086,882,241 0 0 38.10
807 wide-bodied pipefish (UIUO_SnigA 2025) Stigmatopora nigra GCF_051989575.1_RoL_Snig_1.1 156 375,402,015 105 2,100 36.21
808 winter flounder (fPseAme1hap1 2026) Pseudopleuronectes americanus GCA_054850875.1_fPseAme1.hap1 345 572,997,773 980 196,000 28.19
809 winter flounder (fPseAme1hap2 2026) Pseudopleuronectes americanus GCA_054850885.1_fPseAme1.hap2 284 561,814,457 946 189,200 27.42
810 wolf-eel Anarrhichthys ocellatus GCF_004355925.1_GSC_Weel_1.0 10,315 611,444,226 23,891 43,723,504 22.11
811 woolly sculpin (alternate hap CAN_PGR_092001 2022) Clinocottus analis GCA_023055415.1_fCliAna1.0.a 171 534,899,999 222 22,200 25.81
812 woolly sculpin (CAN_PGR_092001 2022) Clinocottus analis GCA_023055335.1_fCliAna1.0.p 443 538,118,947 219 21,900 25.91
813 woolly sculpin (CAN_PGR_092001 primary hap 2022) Clinocottus analis GCF_023055335.1_fCliAna1.0.p 442 538,100,726 219 21,900 25.92
814 worm pipefish (v2.1 RoL_2023-P12025) Nerophis lumbriciformis GCF_033978685.3_RoL_Nlum_v2.1 230 1,774,801,482 40 908 69.86
815 wreckfish (2026) Polyprion americanus GCA_977971305.1_fPolAme2.1 47 767,342,601 23 2,700 29.23
816 Wuchang bream Megalobrama amblycephala GCF_018812025.1_ASM1881202v1 243 1,109,888,616 1,281 1,913,768 43.12
817 X-ray tetra P.maxillaris (Tingi 2024) Pristella maxillaris GCA_045781885.1_ASM4578188v1 157 1,109,133,250 0 0 43.95
818 Yangtze koukloug (SWU-2019 2020) Onychostoma macrolepis GCF_012432095.1_ASM1243209v1 353 886,586,436 617 3,343,332 50.19
819 yellohead goby (2026) Gobius xanthocephalus GCA_984808095.1_fGobXan1.1 1,020 859,247,006 129 13,000 42.79
820 yellohead hulafish (hap2 2026) Trachinops noarlungae GCA_056506975.1_fTraNoa1.hap2 52 638,153,638 155 30,700 24.47
821 yellow and blueback fusilier (hap1 OG672 2025) Caesio teres GCA_048129055.1_fCaeTer1.1_haplotype_1 323 1,078,118,487 29 5,800 33.44
822 yellow and blueback fusilier (hap2 OG672 2025) Caesio teres GCA_048129025.1_fCaeTer1.1_haplotype_2 250 1,033,416,279 17 3,400 31.40
823 yellow catfish (hzauxx_2018 2022) Tachysurus fulvidraco GCF_022655615.1_HZAU_PFXX_2.0 517 712,016,913 817 399,063 35.54
824 yellow catfish (Tf-2017 2018) Tachysurus fulvidraco GCF_003724035.1_ASM372403v1 663 713,810,725 1,760 6,333,458 35.55
825 yellow perch (YP-PL-M2 2019) Perca flavescens GCF_004354835.1_PFLA_1.0 268 877,456,336 831 414,502 35.96
826 yellowfin seabream (v.2019 alternate hap 2020) Acanthopagrus latus GCA_904848175.1_fAcaLat1.1_alternate_haplotype 349 47,986,553 80 8,000 20.44
827 yellowfin seabream (v.2019 primary hap 2020 genbank) Acanthopagrus latus GCA_904848185.1_fAcaLat1.1 65 685,127,588 149 14,900 22.83
828 yellowfin seabream (v.2019 primary hap 2020 refseq) Acanthopagrus latus GCF_904848185.1_fAcaLat1.1 66 685,144,197 149 14,900 22.83
829 yellowfin tuna (alternate hap 2021) Thunnus albacares GCA_914744365.1_fThuAlb1.1_alternate_haplotype 640 786,643,039 0 0 28.56
830 yellowfin tuna (alternate hap 2023) Thunnus albacares GCA_914744365.2_fThuAlb1.2_alternate_haplotype 640 786,643,039 0 0 28.57
831 yellowfin tuna (alternate hap 2026) Thunnus albacares GCA_914744365.3_fThuAlb1.3_alternate_haplotype 640 786,643,039 0 0 28.57
832 yellowfin tuna (primary hap 2021) Thunnus albacares GCF_914725855.1_fThuAlb1.1 68 792,101,331 70 23,300 27.09
833 yellowfin tuna (primary hap 2026) Thunnus albacares GCA_914725855.3_fThuAlb1.3 68 792,076,174 70 23,300 28.69
834 yellowspot frogmouth (2025) Chaunax flavomaculatus GCA_977071325.1_fChaFls1.1 53 673,279,983 48 6,300 27.80
835 yellowtail amberjack (v2 SW California HSWRI2012SDOR001 2017) Seriola lalandi dorsalis GCF_002814215.2_Sedor1 98,345 731,697,021 33,661 16,134,034 25.04
836 yellowtail snapper (2025) Ocyurus chrysurus GCA_977019275.1_fOcyChr1.1 475 1,030,891,425 205 27,900 52.67
837 zebra mbuna (Mazinzi reef 2018) Maylandia zebra GCF_000238955.4_M_zebra_UMD2a 1,690 957,485,262 641 64,100 31.59
838 zebra mbuna (NMK-2024a 2024) Maylandia zebra GCF_041146795.1_Mzebra_GT3a 63 962,175,383 155 11,255,775 39.41
839 zebrafish (fDanRer4 alternate hap 2022) Danio rerio GCA_944039255.1_fDanRer4.1_alternate_haplotype 4,719 458,104,506 0 0 59.54
840 zebrafish (GRCz12tu Tuebingen 2025) Danio rerio GCF_049306965.1_GRCz12tu 26 1,448,808,562 13,351 13,810 60.69
841 zebrafish (M-AB 2025) Danio rerio GCA_052040795.1_GRCz12ab 25 1,450,693,629 1,933 1,992 60.69
842 zebrafish (T5D 2021) Danio rerio GCA_018400075.1_ASM1840007v1 25 1,338,639,271 20,876 1,845,030 61.21
843 zebrafish (Tuebingen 2025) Danio rerio GCF_049306965.2_GRCz12tu 25 1,448,791,966 13,351 13,810 60.63
844 zebrafish (WGS:CAHPTA01 2020) Danio rerio GCA_903684865.1_fDreABH1.1 1,252 1,354,075,779 712 197,709 61.16
845 zebrafish (WGS:CAHPTB02 2020) Danio rerio GCA_903684855.2_fDreTuH1.2 755 1,360,506,095 1,352 82,877 60.94
846 zebrafish (WGS:CALUEM01 primary hap 2022) Danio rerio GCA_944039275.1_fDanRer4.1 73 1,413,675,870 381 122,395 51.91
847 zebrafish GRCz11 Danio rerio GCF_000002035.6_GRCz11 1,923 1,679,203,469 20,258 4,693,618 57.84
848 zig-zag eel (alternate hap) Mastacembelus armatus GCA_900700395.1_fMasArm1.2_alternate_haplotype 1,437 43,703,874 0 0 18.09
849 zig-zag eel (primary hap 2021) Mastacembelus armatus GCF_900324485.3_fMasArm1.3 122 591,935,101 238 13,231,344 23.47
850 zig-zag eel (v1.2 2019 refseq) Mastacembelus armatus GCF_900324485.2_fMasArm1.2 123 591,951,587 238 13,231,344 23.47
851 zig-zag eel (v1.3 2021 genbank) Mastacembelus armatus GCA_900324485.3_fMasArm1.3 123 591,951,591 238 13,231,344 23.47
852 Zvonimir's blenny (2026) Parablennius zvonimiri GCA_982586725.1_fParZvo1.1 30 791,974,536 28 3,700 34.00
TOTALS:total assembly count 852 3,012,471 778,746,856,883 8,314,225 5,948,059,491  

Additional hubs with collections of assemblies
Collection Hub index pages: Assembly statistics: Track statistics:
Primates 627 assemblies assembly stats track stats
Mammals 972 assemblies assembly stats track stats
Birds 608 assemblies assembly stats track stats
Fishes 852 assemblies assembly stats track stats
other vertebrates 504 assemblies assembly stats track stats
Invertebrates 1998 assemblies assembly stats track stats
Plants 465 assemblies assembly stats track stats
Fungi 4136 assemblies assembly stats track stats
Viruses 15117 assemblies assembly stats track stats
Archaea 2977 assemblies assembly stats track stats
Bacteria 23960 assemblies assembly stats track stats
legacy/superseded 691 assemblies assembly stats track stats
collections below are subsets of the assemblies above
VGP - Vertebrate Genome Project 1303 assemblies assembly stats track stats
CCGP - The California Conservation Genomics Project 126 assemblies assembly stats track stats
HPRC - Human Pangenome Reference Consortium 464 assemblies assembly stats track stats
BRC - BRC Analytics - Bioinformatics Research Center 5522 assemblies assembly stats track stats