Vertebrate Genomes assembly hubs, assembly statistics

Assemblies from NCBI/Genbank/Refseq sources, subset of other vertebrates only.

See also: hub access, track statistics


Data resource links

NOTE: Click on the column headers to sort the table by that column
The link to genome browser will attach only that single assembly to the genome browser.
count common name
link to genome browser
scientific name
and data download
NCBI assembly sequence
count
genome size
nucleotides
gap
count
unknown bases
(gap size sum)
masking
percent
1 Abingdon island giant tortoise (Lonesome George 2018) Chelonoidis abingdonii GCF_003597395.1_ASM359739v1 10,618 2,300,739,315 63,430 131,201,757 27.42
2 Abingdon island giant tortoise (Lonesome George 2025) Chelonoidis abingdonii GCF_003597395.2_CheloAbing_2.0 3,850 2,256,485,154 39,154 77,830,784 28.39
3 adder (hap1 2024) Vipera berus GCA_964194415.1_rVipBer3.hap1.1 479 1,695,017,208 1,057 211,400 50.49
4 adder (hap1.1 2024) Vipera berus GCF_964194415.1_rVipBer3.hap1.1 478 1,694,999,861 1,057 211,400 50.67
5 adder (hap2 2024) Vipera berus GCA_964194405.1_rVipBer3.hap2.1 348 1,476,666,783 908 181,443 48.46
6 Adriatic sturgeon (hap1 F7M8 2026) Acipenser naccarii GCA_055691345.2_fAciNac1.hap1 2,083 1,939,452,274 2,714 541,844 47.01
7 Adriatic sturgeon (hap2 F7M8 2026) Acipenser naccarii GCA_055691285.1_fAciNac1.hap2 2,370 1,736,926,170 3,327 615,492 45.33
8 Adriatic sturgeon (hap3 F7M8 2026) Acipenser naccarii GCA_055691255.1_fAciNac1.hap3 1,881 1,654,527,848 3,793 661,391 45.07
9 Adriatic sturgeon (hap4 F7M8 2026) Acipenser naccarii GCA_055691465.1_fAciNac1.hap4 3,438 1,842,435,060 4,779 798,064 44.77
10 Aegean wall lizard (hap1.1 2024) Podarcis erhardii GCF_964252035.1_rPodErh1.hap1.1 326 1,495,994,634 836 167,200 51.38
11 Aeolian wall lizard (La Canna islet alternate hap 2022) Podarcis raffonei GCA_027172095.1_rPodRaf1.alt 4,811 182,031,793 3 260 27.46
12 Aeolian wall lizard (La Canna islet primary hap 2022 refseq) Podarcis raffonei GCF_027172205.1_rPodRaf1.pri 27 1,513,131,503 30 23,116 38.30
13 African bullfrog (1538 2019) Pyxicephalus adspersus GCA_004786255.1_Pads_1.0 5,411 1,563,367,516 121,461 164,412,553 27.96
14 African bullfrog (2023) Pyxicephalus adspersus GCF_032062135.1_UCB_Pads_2.0 8,090 1,440,325,565 40,350 41,022,584 30.39
15 African clawed frog (2021) Xenopus laevis GCF_017654675.1_Xenopus_laevis_v10.1 55 2,742,469,346 667 1,674,718 43.70
16 African softshell turtle (2025) Trionyx triunguis GCA_977009205.1_rTriTgu1.1 43 2,320,326,796 67 13,400 47.22
17 Aldabra giant tortoise (Hermania_blood 2022) Aldabrachelys gigantea GCA_026122505.1_AldGig_1.0 720 2,373,370,604 321 160,500 54.70
18 alligator gar (hap1 2026 genbank) Atractosteus spatula GCA_055471065.1_fAtrSpa1.hap1 356 1,182,717,904 64 12,800 36.29
19 alligator gar (hap1 2026 refseq) Atractosteus spatula GCF_055471065.1_fAtrSpa1.hap1 355 1,182,701,606 64 12,800 40.97
20 alligator gar (hap2 2026) Atractosteus spatula GCA_055504755.1_fAtrSpa1.hap2 234 1,139,929,243 81 16,200 34.47
21 American alligator (2023 refseq) Alligator mississippiensis GCF_030867095.1_rAllMis1 195 2,346,795,873 161 16,453,847 42.90
22 American alligator (hap1 2026) Alligator mississippiensis GCA_057657785.1_rAllMis2.hap1 310 2,356,129,514 144 25,300 42.96
23 American alligator (hap2 2026) Alligator mississippiensis GCA_057657805.1_rAllMis2.hap2 136 2,340,261,515 139 24,600 43.15
24 American alligator (KSC_2009_1 2016) Alligator mississippiensis GCF_000281125.3_ASM28112v4 7,094 2,161,730,208 236,641 47,274,298 36.07
25 American bullfrog (2022-GZ 2024) Aquarana catesbeiana GCF_042186555.1_ASM4218655v1 263 6,377,637,193 4,773 2,385,503 58.62
26 American bullfrog (primary hap 2024) Aquarana catesbeiana GCA_037953035.1_aLitCat1_p1.0 4,071 6,623,830,220 0 0 72.25
27 American eel (EN2019 2024) Anguilla rostrata GCF_018555375.3_ASM1855537v3 967 976,090,453 985 94,525 27.48
28 Amur rat snake (ZZ-2025 2025) Elaphe schrenckii GCA_050231175.1_ASM5023117v1 471 1,685,624,254 464 232,000 55.65
29 Andalusian wall lizard (hap1.1 2025) Podarcis vaucheri GCF_965113315.1_rPodVau1.hap1.1 285 1,614,928,384 949 189,800 54.14
30 angelshark (IRGN 9GIWDBWNYT 2023) Squatina squatina GCA_031763465.1_ASM3176346v1 1,152,659 1,516,571,770 226,036 207,513,064 32.10
31 Arctic lamprey (IMCB_JLM_01 2021) Lethenteron camtschaticum GCA_018977245.1_IMCB_Ljap_1.0 3,553 1,074,727,531 578,345 659,778 61.04
32 Argentine snake-necked turtle (alternate hap 2025) Hydromedusa tectifera GCA_049999975.1_rHydTec1.alt 624 1,846,295,323 0 0 41.25
33 Argentine snake-necked turtle (primary hap 2025) Hydromedusa tectifera GCA_049999965.1_rHydTec1.pri 39 1,849,762,660 114 443,085 41.28
34 Asian narrow-headed softshell turtle (alternate hap 2025) Chitra chitra GCA_052575425.1_rChiChi1.alt 940 101,279,406 0 0 49.00
35 Asian narrow-headed softshell turtle (primary hap 2025) Chitra chitra GCA_052575445.1_rChiChi1.pri 37 2,191,272,715 25 4,400 46.23
36 Asian spadefoot toad (hap1 2026) Megophrys montana GCA_060175755.1_aMegMon1.hap1 183 2,530,665,616 519 98,900 52.33
37 Asian vine snake (Xishuangbanna 2023) Ahaetulla prasina GCF_028640845.1_ASM2864084v1 748 1,772,420,080 331 33,100 48.91
38 Asiatic toad (SCDJY-AF-19 2020) Bufo gargarizans GCF_014858855.1_ASM1485885v1 748 4,545,482,719 3,874 81,454,369 58.76
39 Atlantic hagfish (alternate hap 2024) Myxine glutinosa GCA_964187825.1_kmMyxGlut1.1_alternate_haplotype 24,876 2,754,027,477 2 34 72.31
40 Atlantic hagfish (MG_SS 2024) Myxine glutinosa GCF_040869285.1_UKY_Mglu_1.0 4,270 3,829,277,745 4,876 2,253,344 75.19
41 Atlantic hagfish (primary hap 2024 genbank) Myxine glutinosa GCA_964187855.1_kmMyxGlut1.1 4,004 3,057,523,704 4,412 882,096 74.33
42 Atlantic hagfish (primary hap 2024 refseq) Myxine glutinosa GCF_964187855.1_kmMyxGlut1.1 4,003 3,057,504,053 4,412 882,096 74.33
43 Atlantic ridley (hap1 2025) Lepidochelys kempii GCA_965140285.1_rLepKem1.hap1 54 2,219,022,919 219 42,700 34.46
44 Atlantic ridley (hap2 2025 refseq) Lepidochelys kempii GCF_965140265.1_rLepKem1.hap2 88 2,204,769,334 245 47,100 34.28
45 Atlantic stingray (hap1 2023 refseq) Hypanus sabinus GCF_030144855.1_sHypSab1.hap1 2,989 4,044,869,043 1,648 329,600 51.80
46 Atlantic stingray (hap2 2023) Hypanus sabinus GCA_030144785.1_sHypSab1.hap2 1,412 3,635,158,545 1,633 326,600 50.34
47 Australian saltwater crocodile Crocodylus porosus GCF_001723895.1_CroPor_comp1 70 2,049,536,252 97,039 108,664,899 34.94
48 axolotl (DD151 2021) Ambystoma mexicanum GCA_002915635.3_AmbMex60DD 27,157 28,206,905,576 184,422 3,685,753 68.20
49 axolotl (Mex_15411 2024 refseq) Ambystoma mexicanum GCF_040938575.1_UKY_AmexF1_1 221 29,117,864,639 2,095 417,300 67.13
50 barred grass snake (hap1.1 2024) Natrix helvetica GCF_964273705.1_rNatHel1.hap1.1 487 1,777,516,490 2,010 402,000 53.42
51 basking shark (hap1.1 2024 genbank) Cetorhinus maximus GCA_964194155.1_sCetMax3.hap1.1 5,088 3,993,866,540 2,778 555,635 65.99
52 basking shark (hap1.1 2024 refseq) Cetorhinus maximus GCF_964194155.1_sCetMax3.hap1.1 5,087 3,993,849,873 2,778 555,635 66.00
53 basking shark (hap2.1 2024) Cetorhinus maximus GCA_964194165.1_sCetMax3.hap2.1 3,829 3,817,333,378 2,740 548,000 67.08
54 Bellinger river turtle (v2 BRST_UC0152H_USYD 2025) Myuchelys georgesi GCA_040894355.2_rMyuGeo1.pri 109 1,980,039,302 77 15,400 26.49
55 beluga (Lower Danube River Hh-F2 2024) Huso huso GCA_036884735.1_HHUS_1.1 1,383 1,942,381,910 3,967 1,980,873 41.06
56 big-headed turtle (DO16091913 2018) Platysternon megacephalum GCA_003942145.1_ASM394214v1 359,693 2,319,087,892 109,876 36,533,996 44.01
57 big-headed turtle (hap1 2026) Platysternon megacephalum GCA_057946115.1_rPlaMeg1.hap1 114 2,209,042,750 187 35,100 46.65
58 big-headed turtle (hap2 2026) Platysternon megacephalum GCA_057946265.1_rPlaMeg1.hap2 81 2,208,471,260 173 32,000 46.70
59 Blainville's horned lizard (alternate hap 2022) Phrynosoma blainvillii GCA_026167975.1_rPhrBla1.0.hap2 52 1,968,358,621 64 6,400 40.57
60 Blainville's horned lizard (primary hap 2022) Phrynosoma blainvillii GCA_026167985.1_rPhrBla1.0.hap1 78 2,210,317,752 73 7,300 40.92
61 blonde ray (alternate hap 2023) Raja brachyura GCA_963513955.1_sRajBra1.1_alternate_haplotype 10,683 2,597,179,146 0 0 69.72
62 blonde ray (primary hap 2023 genbank) Raja brachyura GCA_963514005.1_sRajBra1.1 1,647 2,700,467,673 2,269 453,800 66.30
63 blonde ray (primary hap 2023 refseq) Raja brachyura GCF_963514005.1_sRajBra1.1 1,646 2,700,450,552 2,269 453,800 70.23
64 blue shark (ZQ-2024 2024) Prionace glauca GCA_037974335.1_ASM3797433v1 239 3,227,473,548 1,665 166,500 67.63
65 Bocage's wall lizard (hap1.1 2024) Podarcis bocagei GCF_964188305.1_rPodBoc1.hap1.1 507 1,615,206,822 1,005 201,015 54.56
66 Boie's wart frog (hap1 2025) Fejervarya limnocharis GCA_054083975.1_aFejLim2.hap1 628 3,519,779,937 1,684 332,500 63.28
67 brilliant-thighed poison frog (Ecuador 8001 2023) Allobates femoralis GCA_033576535.1_ASM3357653v1 6,646 5,324,439,307 21,710 2,160,982 54.99
68 brown anole (Geneva1000 2022 refseq) Anolis sagrei ordinatus GCF_025583915.1_AnoSag2.1 3,738 1,926,425,113 114,440 31,587,590 45.00
69 brown anole (maternal hap 2024 genbank) Anolis sagrei GCA_037176765.1_rAnoSag1.mat 29 1,950,830,970 191 38,200 46.73
70 brown anole (maternal hap 2024 refseq) Anolis sagrei GCF_037176765.1_rAnoSag1.mat 29 1,950,830,970 191 38,200 46.73
71 brown anole (rAnoSag1 2024) Anolis sagrei GCA_037176775.1_rAnoSag1.pat 41 1,727,284,250 172 34,400 44.79
72 brown hagfish (PATA_SCHIZ_1 2024) Eptatretus atami GCA_035128595.1_Eptata_v1 6,307 2,517,612,418 706,165 137,495,905 47.47
73 brown house snake (FMNH 251328 2023) Boaedon fuliginosus GCA_027560395.1_ASM2756039v1 583,668 1,404,044,445 169,987 25,801,168 34.95
74 brown spotted pit viper Protobothrops mucrosquamatus GCF_001527695.2_P.Mucros_1.0 52,280 1,673,876,332 115,571 131,596,805 35.18
75 brownbanded bambooshark (Juve2018m 2025) Chiloscyllium punctatum GCF_047496795.1_sChiPun1.3 1,989 5,274,411,202 2,891 288,992 54.06
76 Burmese glass lizard (XH-2025 2025) Dopasia gracilis GCA_052054735.1_ASM5205473v1 19 1,531,532,759 197 19,007 46.39
77 Burmese python Python bivittatus GCF_000186305.1_Python_molurus_bivittatus-5.0.2 39,113 1,435,052,152 235,132 50,501,725 25.32
78 Burmese python (LINGU-HERP-01145 2026) Python bivittatus GCF_059951505.1_Pbiv_v1 99 1,428,285,473 0 0 34.25
79 California glossy snake (A.elegans occidentalis HBS 135684 alternate hap 2022) Arizona elegans GCA_022578425.1_rAriEle1.0.a 54,869 2,206,698,359 5,955 595,511 46.05
80 California glossy snake (A.elegans occidentalis HBS 135684 primary hap 2022) Arizona elegans GCA_022577455.1_rAriEle1.0.p 140 1,842,551,953 256 25,618 46.73
81 Cantor's giant softshell turtle (Pc-202001 2023) Pelochelys cantorii GCA_032595735.1_ASM3259573v1 64 2,161,035,712 490 49,000 46.09
82 Cape dwarf chameleon (Western Cape Province JTBG20231 hap1 2025) Bradypodion pumilum GCA_047715975.2_rBraPum1.hap1 73 2,467,904,324 109 21,800 56.48
83 Cape dwarf chameleon (Western Cape Province JTBG20231 hap2 2025) Bradypodion pumilum GCA_047715955.2_rBraPum1.hap2 82 2,479,053,460 120 24,000 56.66
84 Caribbean electric ray (hap1 2024 refseq) Narcine bancroftii GCF_036971445.1_sNarBan1.hap1 595 3,328,432,768 1,443 277,765 54.80
85 Caribbean electric ray (hap2 2024) Narcine bancroftii GCA_036971175.1_sNarBan1.hap2 445 3,110,263,114 1,507 286,941 52.51
86 Carpathian newt (aLisMon1.hap1.1 2026) Lissotriton montandoni GCA_988324385.1_aLisMon1.hap1.1 3,355 24,789,791,630 3,972 409,900 47.53
87 Catalonian wall lizard (hap1.1 2025) Podarcis liolepis GCF_965112155.1_rPodLio1.hap1.1 290 1,574,020,868 921 184,200 52.94
88 central bearded dragon (Pit_001003342236 2025 genbank) Pogona vitticeps GCA_051106095.1_PviZW2.1 90 1,752,831,155 26 2,600 34.91
89 central bearded dragon (Pit_001003342236 2025 refseq) Pogona vitticeps GCF_051106095.1_PviZW2.1 90 1,752,831,175 26 2,600 44.41
90 central bearded dragon (v1 2017) Pogona vitticeps GCF_900067755.1_pvi1.1 13,749 1,716,675,060 90,546 68,427,839 29.79
91 central bearded dragon (v2 2025) Pogona vitticeps GCF_047335585.1_Pvi2.1 16 1,793,327,715 26 2,798 35.93
92 Chile mountains false toad (hap1 2026) Telmatobufo venustus GCA_060712405.1_aTelVen1.hap1 823 4,811,182,505 2,470 247,000 63.24
93 Chinese alligator Alligator sinensis GCF_000455745.1_ASM45574v1 9,317 2,270,567,745 167,965 71,965,296 37.54
94 Chinese brown frog (zglwZSY 2025) Rana chensinensis GCA_052815355.1_ASM5281535v1 311 4,230,638,015 3,210 319,911 77.52
95 Chinese crocodile lizard (Guangxi GXDGS128 2021) Shinisaurus crocodilurus GCA_021292165.1_IOZ_Scro_1.0 1,553 2,189,995,079 852 85,200 43.23
96 Chinese soft-shelled turtle (Daiwa-1 2012) Pelodiscus sinensis GCF_000230535.1_PelSin_1.0 19,904 2,202,483,752 185,476 95,844,368 32.34
97 Chinese soft-shelled turtle (JC-2024 2025) Pelodiscus sinensis GCF_049634645.1_ASM4963464v1 276 2,243,887,989 57 4,710 36.99
98 Chinese spiny frog (XW024 2026) Quasipaa spinosa GCA_060123405.1_ASM6012340v1 484 2,783,108,631 133 13,234 60.03
99 Chinese sturgeon (BW-2024a 2025) Acipenser sinensis GCA_052858605.1_ASM5285860v1 309 1,995,374,126 3,123 1,560,502 48.32
100 Chuanan short-legged toad (LJT-LAB2023082_n 2026) Megophrys chuannanensis GCA_056747305.1_ASM5674730v1 171 2,923,412,787 508 50,800 56.67
101 cliff chirping frog (hap1 2026) Eleutherodactylus marnockii GCA_055470875.1_aEleMan1.hap1 1,175 4,756,406,836 1,094 201,900 59.71
102 cloudy catshark (Kashiwa2021f 2025) Scyliorhinus torazame GCF_047496885.1_sScyTor2.1 2,007 6,451,259,511 4,654 465,342 67.49
103 Cochin Forest cane turtle (hap1 2026) Vijayachelys silvatica GCA_060712455.1_rVijSil1.1.hap1 444 2,296,422,555 394 39,400 53.60
104 coelacanth Latimeria chalumnae GCF_000225785.1_LatCha1 22,819 2,860,591,921 269,010 676,999,153 34.87
105 coelacanth (alternate hap 2024) Latimeria chalumnae GCA_037215105.1_fLatCha1.alt 34,011 1,353,940,091 1 32 65.15
106 coelacanth (primary hap 2024 genbank) Latimeria chalumnae GCA_037176945.1_fLatCha1.pri 198 2,947,625,464 154 30,632 65.92
107 coelacanth (primary hap 2024 refseq) Latimeria chalumnae GCF_037176945.1_fLatCha1.pri 197 2,947,609,019 154 30,632 54.45
108 collared eel (2026) Kaupichthys nuchalis GCA_978019975.1_fKauNuc1.1 39 1,100,335,379 91 9,800 30.75
109 Columbretes wall lizard (hap1.1 2025) Podarcis liolepis GCA_965112155.1_rPodLio1.hap1.1 290 1,574,020,868 921 184,200 40.01
110 Columbretes wall lizard (hap2.1 2025) Podarcis liolepis GCA_965178375.1_rPodLio1.hap2.1 144 1,478,082,625 867 173,400 39.29
111 common blue-tongued skink (hap1 2024) Tiliqua scincoides GCA_035046495.1_rTilSci1.hap1 827 1,694,434,935 286 57,200 37.75
112 common blue-tongued skink (hap2 2024) Tiliqua scincoides GCA_035046505.1_rTilSci1.hap2 350 1,623,332,312 372 74,400 37.07
113 common eastern froglet (primary hap 2026) Crinia signifera GCF_055691185.1_ASM5569118v1 872 3,234,790,400 1,804 360,800 49.81
114 common frog (alternate hap 2021) Rana temporaria GCA_905171725.1_aRanTem1.1_alternate_haplotype 12,019 3,686,210,129 14 85,788 55.47
115 common garter snake Thamnophis sirtalis GCF_001077635.1_Thamnophis_sirtalis-6.0 7,930 1,424,897,867 246,220 302,274,245 27.09
116 common garter snake (CBP01778 primary hap 2026) Thamnophis sirtalis GCF_051295495.1_rThaSir2_p1.2 119 1,624,956,344 1,182 236,400 49.71
117 Common green iguana (ATCC CCL-108 2025) Iguana iguana GCA_051529865.1_UU_Iig_1.0 1,262 2,012,748,361 986 98,600 50.84
118 common lizard (alternate hap 2023) Zootoca vivipara GCA_963506595.1_rZooViv1.1_alternate_haplotype 8,057 1,221,338,756 0 0 44.99
119 common lizard (primary hap 2023) Zootoca vivipara GCA_963506605.1_rZooViv1.1 49 1,440,256,436 683 136,600 45.68
120 common lizard (rZooViv2.hap1.1 2025) Zootoca vivipara GCF_965207765.1_rZooViv2.hap1.1 60 1,424,513,601 108 21,600 45.17
121 common lizard Z.vivipara (hap1.1 2025) Zootoca vivipara GCA_965207765.1_rZooViv2.hap1.1 61 1,424,530,687 108 21,600 37.28
122 common lizard Z.vivipara (hap2.1 2025) Zootoca vivipara GCA_965208345.1_rZooViv2.hap2.1 67 1,423,701,498 102 20,400 37.19
123 common lizard Z.vivipara (primary hap 2023) Zootoca vivipara GCF_963506605.1_rZooViv1.1 48 1,440,239,386 683 136,600 45.64
124 common musk turtle (alternate hap 2023) Sternotherus odoratus GCA_032164215.1_rSteOdo2_a1.0 75 1,745,472,519 1,045 209,000 40.91
125 common newt (v1 alternate hap 2024) Lissotriton vulgaris GCA_964261385.1_aLisVul1.1_alternate_haplotype 191,289 20,825,842,797 62 12,225 47.87
126 common newt (v1 primary hap 2024 genbank) Lissotriton vulgaris GCA_964263255.1_aLisVul1.1 15,265 24,226,223,864 4,030 805,825 63.80
127 common newt (v2 alternate hap 2026) Lissotriton vulgaris GCA_964261385.2_aLisVul1.2_alternate_haplotype 191,289 20,825,842,797 62 12,225 47.87
128 common newt (v2 primary hap 2026 refseq) Lissotriton vulgaris GCF_964263255.1_aLisVul1.2 15,248 24,225,523,036 4,030 805,825 47.59
129 common spadefoot toad (primary hap 2024 genbank) Pelobates fuscus GCA_036172605.1_aPelFus1.pri 160 3,606,474,367 349 69,626 51.45
130 common spadefoot toad (primary hap 2024 refseq) Pelobates fuscus GCF_036172605.1_aPelFus1.pri 159 3,606,456,729 349 69,626 51.45
131 common stingray (2026) Dasyatis pastinaca GCA_987106705.1_sDasPas1.1 929 4,119,270,395 1,662 173,600 68.67
132 common toad (alternate hap 2021) Bufo bufo GCA_905171715.1_aBufBuf1.1_alternate_haplotype 24,195 3,744,894,388 156 491,279 61.49
133 common toad (primary hap 2021) Bufo bufo GCF_905171765.1_aBufBuf1.1 1,306 5,044,744,194 4,199 9,878,258 62.71
134 common wall lizard (hap1 2024 genbank) Podarcis muralis GCA_964188315.1_rPodMur119.hap1.1 185 1,522,641,370 827 165,400 38.70
135 common wall lizard (hap1 2024 refseq) Podarcis muralis GCF_964188315.1_rPodMur119.hap1.1 185 1,522,641,503 827 165,400 49.96
136 common wall lizard (hap2 2024) Podarcis muralis GCA_964188365.1_rPodMur119.hap2.1 91 1,433,931,530 734 146,800 37.85
137 common wall lizard (yellow 2019) Podarcis muralis GCF_004329235.1_PodMur_1.0 2,161 1,511,020,169 4,085 2,917,502 36.17
138 corn snake (Columbia U 2023) Pantherophis guttatus GCF_029531705.1_CU_Pguttatus_1 466 1,708,105,946 3,553 58,150,805 48.06
139 corn snake (EG266 2020) Pantherophis guttatus GCF_001185365.1_UNIGE_PanGut_3.0 34,268 1,706,961,544 84,947 80,217,334 40.33
140 corn snake (Tessera 2026) Pantherophis guttatus GCF_059756535.1_ASM5975653v1 66 1,681,414,805 17 1,700 51.05
141 corroboree frog (hap1 2023) Pseudophryne corroboree GCA_028390055.1_aPseCor3.hap1 3,527 8,945,609,516 2,431 17,791,795 76.17
142 corroboree frog (hap2 2023 refseq) Pseudophryne corroboree GCF_028390025.1_aPseCor3.hap2 3,127 8,872,758,793 2,699 21,212,457 74.73
143 Couch's spadefoot toad (hap1 2026) Scaphiopus couchii GCA_054954225.1_aScaCou1.hap1 578 1,026,710,281 605 13,159,307 34.49
144 Couch's spadefoot toad (hap2 2026) Scaphiopus couchii GCA_054954145.1_aScaCou1.hap2 494 1,065,624,064 620 8,210,273 36.92
145 crested gecko (US Hobby MAA-2024a 2024) Correlophus ciliatus GCA_040207535.1_USC_Ccil_1.0 151 1,652,967,480 11 1,100 34.92
146 Cretan wall lizard (alternate hap 2023) Podarcis cretensis GCA_951804955.1_rPodCre2.1_alternate_haplotype 1,936 1,372,769,884 0 0 38.04
147 Cretan wall lizard (primary hap 2023 genbank) Podarcis cretensis GCA_951804945.1_rPodCre2.1 51 1,507,627,055 47 9,400 38.66
148 Cretan wall lizard (primary hap 2023 refseq) Podarcis cretensis GCF_951804945.1_rPodCre2.1 51 1,507,627,055 47 9,400 46.28
149 cuckoo ray (2025) Leucoraja naevus GCA_965643135.1_sLeuNae2.1 1,503 2,368,913,580 2,173 228,200 67.27
150 Dalmatian wall lizard (hap1.1 2024) Podarcis melisellensis GCF_964234715.1_rPodMel1.hap1.1 386 1,574,923,724 823 164,600 53.07
151 dark-spotted frog (GW-2025 2026) Pelophylax nigromaculatus GCA_054643415.1_ASM5464341v1 180 5,062,672,738 844 422,000 55.69
152 Darwin's frog (hap1 2025) Rhinoderma darwinii GCF_050947455.1_aRhiDar2.hap1 2,942 3,657,511,227 1,606 312,300 63.44
153 Darwin's frog (hap2 2025) Rhinoderma darwinii GCA_050947465.1_aRhiDar2.hap2 1,374 3,445,176,806 1,648 315,200 62.18
154 Delalande's beaked blind snake (hap1 2026) Rhinotyphlops lalandei GCA_057127545.1_rRhiLal1.hap1 125 1,709,958,530 642 127,600 38.00
155 Delalande's beaked blind snake (hap2 2026) Rhinotyphlops lalandei GCA_057127535.1_rRhiLal1.hap2 111 1,705,719,150 624 124,000 38.16
156 desert lancehead (hap1 2026) Bothrops pictus GCA_058248175.2_rBotPic1.hap1 205 1,789,843,302 393 71,900 54.50
157 Desirade skink (SBH274697 2026) Mabuya desiradae GCA_056883445.1_ASM5688344v1 21 1,399,534,388 10,927,641 11,520,993 31.69
158 diablito poison frog (Paru LO004 2023) Oophaga sylvatica GCA_033576555.1_ASM3357655v1 15,283 5,186,611,867 56,659 5,665,461 69.90
159 diamondback terrapin (hap1 2023 refseq) Malaclemys terrapin pileata GCF_027887155.1_rMalTer1.hap1 76 2,211,221,380 141 1,749,567 46.30
160 diamondback terrapin (hap2 2023) Malaclemys terrapin pileata GCA_027887205.1_rMalTer1.hap2 59 2,212,837,039 127 498,579 46.36
161 duckbill oceanic eel (2026) Nessorhamphus ingolfianus GCA_987430295.1_fNesIng1.1 152 2,393,564,313 301 34,700 52.59
162 dusky salamander (AMNH A-194068-9 2025) Desmognathus fuscus GCA_050004315.1_aDesFus1-2.1 15,338 16,117,580,045 4,269 426,900 57.83
163 dyeing poison frog (UK_male_01 2024 genbank) Dendrobates tinctorius GCA_039654945.1_ASM3965494v1 830 6,355,763,190 0 0 70.59
164 dyeing poison frog (UK_male_01 2024 refseq) Dendrobates tinctorius GCF_039654945.1_ASM3965494v1 830 6,355,763,190 0 0 70.59
165 eastern brown snake Pseudonaja textilis GCF_900518735.1_EBS10Xv2-PRI 28,550 1,590,035,073 59,472 39,286,110 39.63
166 eastern brown snake (UNSWEBS1 2025) Pseudonaja textilis GCF_049901715.1_rPseTex1.2 556 1,476,081,604 1,177 117,700 46.83
167 eastern musk turtle (MuskTurtle02 alternate hap 2026) Sternotherus odoratus GCA_032164215.2_rSteOdo2_a1.1 216 1,759,329,236 553 110,600 41.84
168 Eastern musk turtle (MuskTurtle02 primary hap 2026) Sternotherus odoratus GCA_032164245.2_rSteOdo2_p1.1 74 1,745,493,323 1,079 212,400 40.91
169 eastern musk turtle (primary hap 2023) Sternotherus odoratus GCA_032164245.1_rSteOdo2_p1.0 218 1,759,411,633 553 110,600 30.45
170 eastern narrow-mouthed toad (hap2 2023) Gastrophryne carolinensis GCA_027917415.1_aGasCar1.hap2 590 4,305,890,454 1,773 354,600 60.57
171 eastern narrow-mouthed toad (primary haplotype 2023) Gastrophryne carolinensis GCA_027917425.1_aGasCar1.pri 1,002 4,336,248,441 1,745 349,000 60.57
172 Eastern racer (BlueRacer01 primary hap 2024) Coluber constrictor foxii GCA_038048745.1_rColCon1_p1.0 273 1,829,145,047 826 165,200 55.97
173 Eaton's skate (JK-2026 2026) Bathyraja eatonii GCA_061597785.1_ASM61597785v1 3,715 2,107,057,361 3,081 2,831,535 63.12
174 elephant shark (2021) Callorhinchus milii GCF_018977255.1_IMCB_Cmil_1.0 1,762 991,535,955 14,404 67,999 37.93
175 elongated tortoise (hap1 2025) Indotestudo elongata GCA_050000095.2_rIndElo1.hap1 207 2,319,585,464 169 32,100 53.78
176 elongated tortoise (hap2 2025) Indotestudo elongata GCA_050000115.1_rIndElo1.hap2 586 2,343,166,286 171 31,400 53.40
177 Emei moustache toad (SX-2025 2025) Leptobrachium boringii GCA_054131545.1_ASM5413154v1 13 3,372,468,942 1,479 147,900 76.24
178 epaulette shark (alternate hap 2021) Hemiscyllium ocellatum GCA_020745765.1_sHemOce1.mat.decon 4,000 4,149,461,884 3,552 83,364,248 44.34
179 epaulette shark (primary hap 2021 refseq) Hemiscyllium ocellatum GCF_020745735.1_sHemOce1.pat.X.cur. 1,962 3,983,466,396 3,716 77,564,682 62.70
180 Erhard's wall lizard (hap1.2 2026 genbank) Podarcis erhardii GCA_964252035.2_rPodErh1.hap1.2 316 1,495,379,484 836 167,200 51.40
181 Erhard's wall lizard (hap1.2 2026 refseq) Podarcis erhardii GCF_964252035.2_rPodErh1.hap1.2 316 1,495,379,484 836 167,200 51.34
182 Erhard's wall lizard (hap2.2 2026) Podarcis erhardii GCA_964251985.2_rPodErh1.hap2.2 391 1,461,508,966 811 162,200 50.29
183 European brook lamprey (2025) Lampetra planeri GCF_965212315.1_kcLamPlan1.2.h2 2,193 960,362,263 873 174,482 61.94
184 European common frog (2021) Rana temporaria GCF_905171775.1_aRanTem1.1 554 4,111,422,596 1,860 26,194,034 55.46
185 European conger (alternate hap 2023) Conger conger GCA_963514125.1_fConCon1.1_alternate_haplotype 3,769 1,078,186,129 0 0 36.42
186 European eel (alternate hap 2020) Anguilla anguilla GCA_013347865.1_fAngAng1.alt 2,338 965,248,483 0 0 27.36
187 European eel (primary hap 2020 refseq) Anguilla anguilla GCF_013347855.1_fAngAng1.pri 54 979,045,926 640 3,868,499 27.45
188 European green toad (Lasithi_1F 2023) Bufotes viridis GCA_033119425.1_bufVir1 13,315 3,796,774,568 5,177 20,683,923 76.22
189 European leaf-toed gecko (hap1 2023) Euleptes europaea GCF_029931775.1_rEulEur1.hap1 591 1,781,916,107 153 4,045,040 39.82
190 European leaf-toed gecko (hap2 2023) Euleptes europaea GCA_029931755.1_rEulEur1.hap2 381 1,775,520,415 177 5,646,691 39.56
191 European pond turtle (hap1 2023 genbank) Emys orbicularis GCA_028017835.1_rEmyOrb1.hap1 106 2,309,740,635 148 3,324,230 35.43
192 European pond turtle (hap1 2023 refseq) Emys orbicularis GCF_028017835.1_rEmyOrb1.hap1 106 2,309,740,635 148 3,324,230 35.43
193 European pond turtle (hap2 2023) Emys orbicularis GCA_028017845.1_rEmyOrb1.hap2 156 2,327,425,914 130 5,287,839 35.51
194 European river lamprey (alternate hap 2024) Lampetra fluviatilis GCA_964198585.1_kcLamFluv1.1_alternate_haplotype 5,717 939,632,249 9 1,800 65.06
195 European river lamprey (primary hap 2024 genbank) Lampetra fluviatilis GCA_964198595.1_kcLamFluv1.1 1,497 1,042,475,189 1,795 359,000 50.86
196 European river lamprey (primary hap 2024 refseq) Lampetra fluviatilis GCF_964198595.1_kcLamFluv1.1 1,496 1,042,458,987 1,795 359,000 66.24
197 Far Eastern brook lamprey (v1 LAM-NWPU_2019-01 2020) Lethenteron reissneri GCF_015708825.1_ASM1570882v1 1,946 1,063,028,601 3,287 10,736,065 47.92
198 Far Eastern brook lamprey (v2 LAM-NWPU_2019-01 2020) Lethenteron reissneri GCF_015708825.2_ASM1570882v1 1,945 1,063,012,140 3,287 10,736,065 61.48
199 fence lizard Sceloporus undulatus GCF_019175285.1_SceUnd_v1.1 45,012 1,905,484,175 48,138 47,138,997 34.39
200 Filfola wall lizard (hap1.1 2024 genbank) Podarcis filfolensis GCA_964270895.1_rPodFil1.hap1.1 349 1,506,966,124 872 174,400 37.95
201 Filfola wall lizard (hap1.1 2024 refseq) Podarcis filfolensis GCF_964270895.1_rPodFil1.hap1.1 349 1,506,966,124 872 174,400 50.71
202 Filfola wall lizard (hap2.1 2024) Podarcis filfolensis GCA_964270875.1_rPodFil1.hap2.1 142 1,404,018,672 795 159,030 36.85
203 fire-bellied toad (alternate hap 2023) Bombina bombina GCA_027579415.1_aBomBom1.alt 13,751 1,936,746,371 0 0 57.30
204 fire-bellied toad (primary hap 2023 refseq) Bombina bombina GCF_027579735.1_aBomBom1.pri 2,467 10,019,663,791 7,009 198,898,177 69.42
205 flapper skate (hap1.1 2026) Dipturus intermedius GCA_983203515.1_sDipInt39.hap1.1 3,667 3,261,934,780 4,961 527,150 74.40
206 flapper skate (hap2.1 2026) Dipturus intermedius GCA_983203605.1_sDipInt39.hap2.1 2,143 2,945,862,003 4,331 442,415 73.36
207 flatback sea turtle (hap1 2025 refseq) Natator depressus GCF_965152275.1_rNatDep2.hap1 40 2,173,430,419 171 30,501 32.96
208 flatback sea turtle (hap2 2025) Natator depressus GCA_965152195.1_rNatDep2.hap2 61 2,130,756,730 261 44,502 43.66
209 Fleay's barred frog (hap1 2024 genbank) Mixophyes fleayi GCA_038048845.1_aMixFle1.hap1 2,806 2,969,628,263 1,421 3,802,133 46.39
210 Fleay's barred frog (hap1 2024 refseq) Mixophyes fleayi GCF_038048845.1_aMixFle1.hap1 2,806 2,969,628,263 1,421 3,802,133 46.39
211 Fleay's barred frog (hap2 2024) Mixophyes fleayi GCA_038048865.1_aMixFle1.hap2 914 2,876,209,288 1,383 3,308,527 44.69
212 Florida worm lizard (hap1 2023) Rhineura floridana GCA_030035715.1_rRhiFlo1.hap1 623 2,321,796,813 213 3,744,152 45.22
213 Florida worm lizard (hap2 2023 genbank) Rhineura floridana GCA_030035675.1_rRhiFlo1.hap2 77 2,307,436,586 242 6,466,284 45.32
214 Florida worm lizard (hap2 2023 refseq) Rhineura floridana GCF_030035675.1_rRhiFlo1.hap2 76 2,307,419,594 242 6,466,284 45.32
215 frog A.baeobatrachus (hap1 2025 genbank) Anomaloglossus baeobatrachus GCA_048569485.1_aAnoBae1.hap1 3,642 6,265,077,250 3,772 740,432 69.97
216 frog A.baeobatrachus (hap1 2025 refseq) Anomaloglossus baeobatrachus GCF_048569485.1_aAnoBae1.hap1 3,643 6,265,094,822 3,773 740,433 69.97
217 frog A.baeobatrachus (hap2 2025) Anomaloglossus baeobatrachus GCA_048569465.1_aAnoBae1.hap2 2,426 6,129,031,283 3,799 743,629 69.31
218 frog Boulenophrys sangzhiensis (2026) Boulenophrys sangzhiensis GCA_056363575.1_Boulenophrys_sangzhiensis_v1.0 144 2,779,238,705 330 33,000 52.49
219 frog Ptychadena robeensis (15-139 2024) Ptychadena robeensis GCA_036250615.1_ASM3625061v1 27,292 1,591,013,924 212,285 19,773,480 38.77
220 Gaboon caecilian (alternate hap 2019) Geotrypetes seraphini GCA_902459495.1_aGeoSer1.1_alternate_haplotype 9,650 3,271,590,920 1 30 52.45
221 Gaboon caecilian (primary hap 2021) Geotrypetes seraphini GCF_902459505.2_aGeoSer1.2 163 3,779,413,726 433 5,502,713 74.48
222 Gaboon caecilian (v1.2 2021 genbank) Geotrypetes seraphini GCA_902459505.2_aGeoSer1.2 164 3,779,430,017 433 5,502,713 52.86
223 gharial (Ggan-Ray 2016) Gavialis gangeticus GCF_001723915.1_GavGan_comp1 81 2,640,792,433 248,526 698,155,287 27.15
224 gharial (hap1 2023) Gavialis gangeticus GCA_030020385.1_rGavGan2.hap1 298 2,339,480,201 61 1,123,919 33.04
225 gharial (hap2 2023) Gavialis gangeticus GCA_030020295.1_rGavGan2.hap2 160 2,328,538,659 118 1,108,111 32.92
226 giant manta (hap1 2023 refseq) Mobula birostris GCF_030028105.1_sMobBir1.hap1 4,715 4,014,635,230 1,810 30,852,630 54.43
227 giant manta (hap2 2023) Mobula birostris GCA_030035685.1_sMobBir1.hap2 1,558 3,634,101,053 1,742 54,983,815 51.68
228 giant moray (Gymjav_1 2023) Gymnothorax javanicus GCA_029692085.1_GJAV_1.0 469 2,124,863,002 823 82,300 62.87
229 giant South American river turtle (hap1 2024) Podocnemis expansa GCA_045364785.1_rPodExp1_haplotype_1 2,039 2,642,177,504 260 52,000 35.53
230 giant South American river turtle (hap2 2024) Podocnemis expansa GCA_045364815.1_rPodExp1_haplotype_2 725 2,565,358,608 224 44,800 33.86
231 Gila monster (Gila_16-S 2026) Heloderma suspectum GCF_057233095.1_16-S_ref 19 2,499,252,685 1 100 49.91
232 gold dust stingray (hap1 2026) Potamotrygon marinae GCA_055471165.1_sPotMar1.hap1 1,101 4,954,887,661 1,114 199,000 74.57
233 golden lancehead (SB1851 2026) Bothrops insularis GCA_055824665.1_ASM5582466v1 111 1,565,323,207 589 117,300 49.44
234 golden mantella (hap1 2025) Mantella aurantiaca GCA_048565345.1_aManAur1.hap1 3,088 3,336,112,499 4,138 827,249 53.24
235 golden mantella (hap2 2025) Mantella aurantiaca GCA_048565335.1_aManAur1.hap2 2,611 3,319,283,846 3,921 784,025 53.37
236 golden poison dart frog (yellow primary hap 2024) Phyllobates terribilis GCF_046119375.1_ASM4611937v1 9,343 10,565,307,257 1,234 123,034 81.78
237 goldentail moray (2026) Gymnothorax miliaris GCA_987191265.1_fGymMil1.1 43 2,054,988,274 76 9,100 59.78
238 goldspotted eel (2025) Myrichthys ocellatus GCA_975146105.1_fMyrOce1.1 38 1,515,218,214 147 15,100 39.54
239 Goodes thornscrub tortoise (Sinaloan 2019) Gopherus evgoodei GCF_007399415.2_rGopEvg1_v1.p 383 2,298,564,209 562 29,560,319 33.37
240 Goodes thornscrub tortoise (Sinaloan alternate hap 2019) Gopherus evgoodei GCA_007399395.1_rGopEvg1_v1.alt 8,736 1,961,129,424 0 0 33.34
241 Goodes thornscrub tortoise (Sinaloan lineage primary hap 2019) Gopherus evgoodei GCA_007399415.1_rGopEvg1_v1.p 383 2,298,564,209 562 29,560,319 33.37
242 gopher snake (HBS135680 alternate hap 2023 refseq) Pituophis catenifer annectens GCF_029215685.1_rPitCat1.0.hap2 649 1,682,881,129 584 58,400 45.94
243 gopher snake (HBS135680 primary hap 2023) Pituophis catenifer annectens GCA_029215655.1_rPitCat1.0.hap1 426 1,749,255,673 603 60,300 45.41
244 graceful crag lizard (Gifberg primary hap 2022) Hemicordylus capensis GCF_027244095.1_rHemCap1.1.pri 44 2,294,751,221 42 8,400 41.45
245 Grand Cayman blue iguana (hap1 2023) Cyclura pinguis GCA_030412105.1_rCycPin1.hap1 30 1,983,631,412 28 1,082,164 32.57
246 Grand Cayman blue iguana (hap2 2023) Cyclura pinguis GCA_030412085.1_rCycPin1.hap2 33 1,955,392,031 19 19,385,908 32.31
247 gray bichir Polypterus senegalus GCF_016835505.1_ASM1683550v1 9,856 3,673,880,163 3,166 1,583,000 47.67
248 great white shark (alternate hap 2021) Carcharodon carcharias GCA_017639455.1_sCarCar2.alt 39 6,205,005 28 1,535 60.53
249 great white shark (primary hap 2021 genbank) Carcharodon carcharias GCA_017639515.1_sCarCar2.pri 719 4,286,311,192 2,645 19,150,268 64.19
250 great white shark (primary hap 2021 refseq) Carcharodon carcharias GCF_017639515.1_sCarCar2.pri 719 4,286,311,191 2,645 19,150,268 52.46
251 greater Saint Croix skink (242174 2026) Spondylurus magnacruzae GCA_056884235.1_ASM5688423v1 21 1,397,933,901 4,933,696 5,071,166 32.75
252 green anole (JA03-04 2024) Anolis carolinensis GCF_035594765.1_rAnoCar3.1.pri 211 1,850,740,401 841 30,006,477 52.33
253 green anole (v1 2011) Anolis carolinensis GCF_000090745.1_AnoCar2.0 6,457 1,799,143,587 35,533 97,789,820 39.70
254 green anole (v2 2010) Anolis carolinensis GCF_000090745.2_AnoCar2.0 6,456 1,799,126,364 35,530 97,789,817 48.60
255 green sea turtle (primary hap 2021) Chelonia mydas GCA_015237465.2_rCheMyd1.pri.v2 92 2,134,358,617 298 11,960,176 44.47
256 green sea turtle (v2 alternate hap 2021) Chelonia mydas GCA_015220195.2_rCheMyd1.alt.v2 6,737 1,896,142,417 60 854,042 44.96
257 green sea turtle (v2 primary hap 2021) Chelonia mydas GCF_015237465.2_rCheMyd1.pri.v2 93 2,134,375,114 298 11,960,176 31.96
258 Greenland sleeper shark (GS21.2 2025 genbank) Somniosus microcephalus GCA_052327205.1_FLI_Smic_1.0 2,112 6,448,622,878 11,933 5,965,161 75.60
259 Greenland sleeper shark (GS21.2 2025 refseq) Somniosus microcephalus GCF_052327205.1_FLI_Smic_1.0 2,111 6,448,606,148 11,933 5,965,161 75.61
260 grey reef shark (hapA 2025) Carcharhinus amblyrhynchos GCF_965287045.1_sCarAmb.v2.hapA 1,521 2,923,578,137 883 88,300 59.06
261 grey reef shark (hapB 2025) Carcharhinus amblyrhynchos GCA_965295155.1_sCarAmb.v2.hapB 1,534 2,927,843,764 876 87,600 59.12
262 hagfishes (Nan-Hai 2024) Eptatretus okinoseanus GCA_041222605.1_ASM4122260v1 1,373 1,888,665,302 2,308 1,154,000 61.37
263 hawksbill sea turtle (B2_1 2023) Eretmochelys imbricata GCA_030012505.1_ASM3001250v1 208 2,296,226,205 95 45,071 43.96
264 hawksbill sea turtle (hap1 2025 genbank) Eretmochelys imbricata GCA_965152235.1_rEreImb1.hap1 57 2,218,003,986 131 2,771,483 33.65
265 hawksbill sea turtle (hap1 2025 refseq) Eretmochelys imbricata GCF_965152235.1_rEreImb1.hap1 57 2,218,003,685 131 2,771,483 49.49
266 hawksbill sea turtle (hap2 2025) Eretmochelys imbricata GCA_965152285.1_rEreImb1.hap2 41 2,224,324,466 132 2,732,219 34.07
267 hellbender (hap1 2026) Cryptobranchus alleganiensis GCA_060551615.1_aCryAll3.hap1 15,812 49,388,744,164 24,119 2,412,700 65.09
268 hickatee (hap1 2025) Dermatemys mawii GCA_054099655.1_rDerMaw1.hap1 151 1,951,716,569 132 24,900 41.96
269 hickatee (hap2 2025) Dermatemys mawii GCA_054099715.1_rDerMaw1.hap2 162 1,926,746,312 137 23,500 39.95
270 High Himalaya frog Nanorana parkeri GCF_000935625.1_ASM93562v1 25,188 2,053,867,363 122,325 76,078,142 37.46
271 horn shark (hap1 2024) Heterodontus francisci GCA_036365525.1_sHetFra1.hap1 2,307 6,013,065,386 2,781 28,369,521 71.59
272 horn shark (hap2 2024) Heterodontus francisci GCA_036365495.1_sHetFra1.hap2 1,496 5,196,885,747 2,790 29,620,202 62.99
273 horn shark (sHetFra1hap1 2024) Heterodontus francisci GCF_036365525.1_sHetFra1.hap1 2,306 6,013,048,672 2,781 28,369,521 68.67
274 horseshoe snake (2026) Hemorrhois hippocrepis GCA_985781035.1_rHemHip1.2_hap1 56 1,851,490,349 19 3,800 57.40
275 hourglass treefrog (maternal 2023 genbank) Dendropsophus ebraccatus GCA_027789725.1_aDenEbr1.mat 2,570 2,352,821,159 788 113,357,492 48.50
276 hourglass treefrog (paternal 2023 refseq) Dendropsophus ebraccatus GCF_027789765.1_aDenEbr1.pat 2,200 2,214,937,069 804 6,692,944 51.44
277 Hubei keelback (MD-2024a 2024) Rhabdophis nuchalis GCA_039707465.1_ASM3970746v1 405 1,924,646,879 344 34,400 57.13
278 Hungarian meadow viper (primary hap 2022) Vipera ursinii GCF_947247035.1_rVipUrs1.1 384 1,625,023,540 1,819 363,800 51.01
279 Iberian parsley frog (primary hap 2024) Pelodytes ibericus GCA_036172795.1_aPelIbe1.pri 99 2,077,659,799 262 52,400 49.33
280 Iberian ribbed newt (20211129_DDA 2022 genbank) Pleurodeles waltl GCA_026652325.1_ASM2665232v1 267 20,300,798,037 922 333,042 71.01
281 Iberian ribbed newt (hap1 20211129_DDA 2024 refseq) Pleurodeles waltl GCF_031143425.1_aPleWal1.hap1.20221129 616 19,767,450,834 1,829 368,137 71.11
282 Ibiza wall lizard (hap1.3 2026 genbank) Podarcis pityusensis GCA_964106645.3_rPodPit1.hap1.3 305 1,514,386,815 1,505 301,000 51.05
283 Ibiza wall lizard (hap1.3 2026 refseq) Podarcis pityusensis GCF_964106645.2_rPodPit1.hap1.3 305 1,514,386,815 1,505 301,000 51.00
284 Ibiza wall lizard (hap2.3 2026) Podarcis pityusensis GCA_964106635.3_rPodPit1.hap2.3 176 1,416,878,890 1,365 273,000 49.63
285 Indian cobra (NN01 2019) Naja naja GCA_009733165.1_Nana_v5 1,897 1,768,535,092 11,910 109,672,238 40.42
286 Indian roofed turtle (hap1 2024) Pangshura tecta GCA_045781095.1_rPanTec1.hap1 629 2,165,924,875 205 41,000 32.52
287 Indian roofed turtle (hap2 2024) Pangshura tecta GCA_045781085.1_rPanTec1.hap2 449 2,174,585,695 260 52,000 32.71
288 Indian short-finned eel (HC-2024 2024) Anguilla bicolor pacifica GCA_039654925.2_AngPac_1 30 1,087,610,536 375 37,500 36.89
289 Indo-Pacific tarpon (alternate hap 2020) Megalops cyprinoides GCA_013368575.1_fMegCyp1.alt 4,333 920,469,332 3 300 21.53
290 Indo-Pacific tarpon (primary hap 2020) Megalops cyprinoides GCA_013368585.1_fMegCyp1.pri 207 959,258,777 63 283,098 22.11
291 inshore hagfish (2023) Eptatretus burgeri GCA_900186335.3_Eburgeri_4.0 9,340 2,617,732,394 332,729 1,182,361,276 28.47
292 inshore hagfish (2026) Eptatretus burgeri GCF_056783735.1_Ebu_testis_v1 3,194 1,996,294,366 3,288 1,635,891 62.74
293 Italian stream frog (hap2 2026) Rana italica GCA_982398585.1_aRanIta1.1.hap2 297 5,024,435,688 2,720 544,000 79.08
294 Italian wall lizard (hap1.1 2024) Podarcis siculus GCA_964188175.1_rPodSic1.hap1.1 294 1,571,381,643 762 152,400 40.39
295 Italian wall lizard (hap2.1 2024) Podarcis siculus GCA_964188395.1_rPodSic1.hap2.1 152 1,455,930,776 690 138,015 38.73
296 Japanese eel (BU-2020EF 2022) Anguilla japonica GCA_025169545.1_ASM2516954v1 86 1,028,695,784 725 5,880,479 28.64
297 Japanese sawshark (hap1 2024 refseq) Pristiophorus japonicus GCF_044704955.1_sPriJap1.hap1 4,318 5,923,069,295 5,985 1,196,474 71.83
298 Japanese sawshark (hap2 2024) Pristiophorus japonicus GCA_044704965.1_sPriJap1.hap2 5,626 6,365,258,383 5,953 1,190,293 73.82
299 Kaup's arrowtooth eel (Taiwan WJC10195 2023) Synaphobranchus kaupii GCA_029718625.1_SKAU_1.1 99 1,503,294,022 5,609 2,765,503 51.54
300 Kemp's ridley sea turtle (hap1 2025) Lepidochelys kempii GCF_965140285.1_rLepKem1.hap1 54 2,219,022,919 219 42,700 50.06
301 Kenyan clawed frog (NASCO 2022) Xenopus borealis GCA_024363595.1_UCB_Xborealis_1 23,435 2,747,450,723 233,029 552,164,012 35.61
302 Komodo dragon (SLA01 2019) Varanus komodoensis GCF_004798865.1_ASM479886v1 1,411 1,507,945,839 19,737 14,639,079 24.66
303 Korean lamprey (ZD-2024d 2026) Eudontomyzon morii GCA_056783725.1_Lmo_muscle_v1 428 949,764,836 632 312,184 64.25
304 Kotschy's gecko (rMedKot1.hap1.1 2025) Mediodactylus kotschyi GCA_965636955.1_rMedKot1.hap1.1 78 1,798,529,910 96 19,200 42.71
305 Kroombit tinker frog (2023) Taudactylus pleione GCF_031769625.1_aTauple2 4,085 5,507,797,579 0 0 61.28
306 lampreys (CW_2021.1 2026) Caspiomyzon wagneri GCA_062014791.1_UKy_Caswag_21M1.pri1.0 728 1,207,632,080 1,293 506,500 66.08
307 lampreys (kcIchGage1.somhap2 2026) Ichthyomyzon gagei GCA_062039095.1_kcIchGage1.som.hap2 792 1,190,993,995 740 137,125 65.12
308 Lataste's viper (alternate hap 2022) Vipera latastei GCA_024294605.1_rVipLat1.alt 6,799 1,549,880,332 1 500 44.01
309 Lataste's viper (primary hap 2022) Vipera latastei GCA_024294585.1_rVipLat1.pri 56 1,631,568,913 769 3,547,667 44.82
310 leatherback sea turtle (primary hap 2021) Dermochelys coriacea GCA_009764565.4_rDerCor1.pri.v4 41 2,164,778,715 668 5,594,612 47.14
311 leatherback sea turtle (v2 alternate hap 2020) Dermochelys coriacea GCA_009762595.2_rDerCor1.alt.v2 8,999 1,444,786,651 7 352 47.10
312 leatherback sea turtle (v4 primary hap 2021 refseq) Dermochelys coriacea GCF_009764565.3_rDerCor1.pri.v4 40 2,164,762,090 668 5,594,612 34.21
313 Leishan spiny toad (GZLS1 2019) Leptobrachium leishanense GCA_009667805.1_ASM966780v1 5,302 3,549,060,464 3,282 328,200 60.07
314 leopard gecko (TG4126 2023 genbank) Eublepharis macularius GCA_028583425.1_MPM_Emac_v1.0 75 2,237,379,946 61 6,100 40.72
315 leopard gecko (TG4126 2023 refseq) Eublepharis macularius GCF_028583425.1_MPM_Emac_v1.0 76 2,237,397,408 62 6,101 37.92
316 lesser devil ray (2024) Mobula hypostoma GCF_963921235.1_sMobHyp1.1 200 3,475,679,493 697 139,400 54.19
317 Lilford's wall lizard (2023) Podarcis lilfordi GCA_947686815.1_rPodLil1.2 2,149 1,460,103,102 2,346 259,303 36.71
318 little skate (New England 2023) Leucoraja erinaceus GCF_028641065.1_Leri_hhj_1 1,769 2,190,861,671 862 81,010 66.54
319 Little striped whiptail (17121 2025) Aspidoscelis inornatus arizonae GCA_053572275.1_AspAri2.0 3,148 1,527,907,731 85,668 16,606,704 45.63
320 lizards A.caudivolvulus (BBC_2024a 2024) Asaccus caudivolvulus GCA_042257475.1_ASM4225747v1 37 1,733,398,839 242 88,000 44.41
321 lizards A.duperreyi (Individual 364 2024) Acritoscincus duperreyi GCA_041722995.2_BASDU_1.0 172 1,567,894,183 54 10,800 40.60
322 lizards A.tigris stejnegeri (HBS 135688 alternate hap 2025) Aspidoscelis tigris stejnegeri GCA_023333555.2_rAspTig1.1.alt 78 1,435,021,382 42 4,200 51.36
323 lizards B.pumilum (Western Cape Province hap1 2025) Bradypodion pumilum GCA_047715975.1_rBraPum1.hap1 73 2,467,904,324 109 21,800 56.48
324 lizards B.pumilum (Western Cape Province hap2 2025) Bradypodion pumilum GCA_047715955.1_rBraPum1.hap2 82 2,479,053,460 120 24,000 56.66
325 lizards B.pumilum (Western Cape Province JTBG20231 2024) Bradypodion pumilum GCA_035047305.1_BraPum1.0 21 2,486,266,449 18 1,777 56.83
326 lizards C.egeriae (BTS541 2025) Cryptoblepharus egeriae GCA_030015325.2_Cryege1_pri_2025 37 1,463,223,313 12 1,154 37.99
327 lizards C.ocellatus (2025) Carinascincus ocellatus GCA_965280105.1_Cocellatus_unphased.v1 44 1,489,099,317 40 20,000 41.13
328 lizards C.pulcher (TD-2025a 2026) Cryptoblepharus pulcher GCA_055504975.1_crypul_v2024.1.fa 17 1,483,034,756 44 8,800 39.61
329 lizards C.scabrum (Arizona 2026) Cyrtopodion scabrum GCA_054791115.1_MPM_CyrtScab 21 2,025,647,772 157 15,700 41.16
330 lizards D.cf. smithi (hap1 2024) Dibamus cf. smithi GCA_046126795.1_rDibSmi1.hap1 327 2,282,721,590 274 54,800 44.05
331 lizards D.cf. smithi (hap2 2024) Dibamus cf. smithi GCA_046126825.1_rDibSmi1.hap2 720 1,821,555,219 197 39,400 42.57
332 lizards D.maculatus (Xishuangbanna Tropical Botanical Garden IS-2026a 2026) Draco maculatus GCA_056783515.1_NNU_DrMac_1.0 43 1,728,033,920 948 91,797 43.27
333 lizards E.multicarinata webbii (San Diego HBS135686 alternate hap 2024) Elgaria multicarinata webbii GCA_023053675.2_rElgMul1.1.alt 627 1,810,359,265 28 2,734 52.45
334 lizards F.pardalis (Fpa_1 2023) Furcifer pardalis GCA_030440675.1_ASM3044067v1 11 1,609,777,135 12 11,023 42.07
335 lizards G.kuhli (2025) Gekko kuhli GCA_051903775.2_MPM_Gkuhli_v0.4 103 2,404,302,788 823 82,300 55.68
336 lizards L.agilis (primary hap 2019) Lacerta agilis GCA_009819535.1_rLacAgi1.pri 29 1,391,406,172 379 3,491,078 34.50
337 lizards P.bocagei (hap1.1 2024) Podarcis bocagei GCA_964188305.1_rPodBoc1.hap1.1 507 1,615,206,822 1,005 201,015 41.41
338 lizards P.bocagei (hap2.1 2024) Podarcis bocagei GCA_964188325.1_rPodBoc1.hap2.1 627 1,473,581,329 817 163,400 39.42
339 lizards P.erhardii (hap1.1 2024) Podarcis erhardii GCA_964252035.1_rPodErh1.hap1.1 326 1,495,994,634 836 167,200 38.58
340 lizards P.erhardii (hap2.1 2024) Podarcis erhardii GCA_964251985.1_rPodErh1.hap2.1 647 1,477,748,000 811 162,200 37.96
341 lizards P.guinanensis (GN01 2024) Phrynocephalus guinanensis GCA_037367245.1_CIB_Pgui_1.0 50 1,813,735,221 1,220 610,000 51.85
342 lizards P.melisellensis (hap1.1 2024) Podarcis melisellensis GCA_964234715.1_rPodMel1.hap1.1 386 1,574,923,724 823 164,600 40.21
343 lizards P.melisellensis (hap2.1 2024) Podarcis melisellensis GCA_964234825.1_rPodMel1.hap2.1 200 1,437,044,901 754 150,800 37.90
344 lizards P.pityusensis (hap1.2 2024 genbank) Podarcis pityusensis GCA_964106645.2_rPodPit1.hap1.2 336 1,515,373,509 1,506 301,200 38.22
345 lizards P.pityusensis (hap1.2 2024 refseq) Podarcis pityusensis GCF_964106645.1_rPodPit1.hap1.2 336 1,515,373,509 1,506 301,200 51.02
346 lizards P.pityusensis (hap2.2 2024) Podarcis pityusensis GCA_964106635.2_rPodPit1.hap2.2 183 1,417,079,496 1,365 273,000 37.15
347 lizards P.tiliguerta (hap2.2 2025) Podarcis tiliguerta GCA_965153305.2_rPodTil1.hap2.2 307 1,394,940,404 1,003 200,600 49.04
348 lizards P.vaucheri (hap1.1 2025) Podarcis vaucheri GCA_965113315.1_rPodVau1.hap1.1 285 1,614,928,384 949 189,800 41.38
349 lizards P.vaucheri (hap2.1 2025) Podarcis vaucheri GCA_965113305.1_rPodVau1.hap2.1 151 1,510,738,089 852 170,400 40.40
350 lizards S.anegadae (242060 2026) Spondylurus anegadae GCA_056883415.1_Sanegadae_242060 21 1,397,698,145 3,908,285 4,004,006 33.02
351 lizards S.caicosae (RGR3006 2026) Spondylurus caicosae GCA_056883335.1_ASM5688333v1 21 1,397,809,951 3,397,230 3,521,804 33.22
352 lizards S.culebrae (Spon5 2026) Spondylurus culebrae GCA_056883235.1_ASM5688323v1 21 1,397,473,864 2,704,449 2,808,652 33.35
353 lizards S.fulgidus (SBH267958 2026) Spondylurus fulgidus GCA_056884295.1_ASM5688429v1 21 1,399,671,743 9,489,911 9,900,922 32.09
354 lizards S.macleani (USNM576303 2026) Spondylurus macleani GCA_056884245.1_ASM5688424v1 21 1,397,496,415 2,726,656 2,833,063 33.34
355 lizards S.monitae (USNM576301 2026) Spondylurus monitae GCA_056884155.1_ASM5688415v1 21 1,397,581,056 1,679,513 1,749,320 33.38
356 lizards S.nitidus (UPRMR694 2026) Spondylurus nitidus GCA_056883755.1_ASM5688375v1 21 1,397,836,032 1,431,826 1,472,021 33.54
357 lizards S.powelli (SBH274774 2026) Spondylurus powelli GCA_056883725.1_ASM5688372v1 21 1,398,563,774 6,868,127 7,222,415 32.60
358 lizards S.semitaeniatus (SBH269171 2026) Spondylurus semitaeniatus GCA_056883555.1_ASM5688355v1 21 1,397,677,508 5,667,557 5,841,546 32.48
359 lizards S.sloanii (USNM576305 2026) Spondylurus sloanii GCA_056883505.1_ASM5688350v1 21 1,397,490,842 3,572,634 3,694,509 33.10
360 lizards T.roborowskii (PY-2025 2025) Teratoscincus roborowskii GCA_051473905.1_ASM5147390v1 46 2,077,087,367 14 1,400 43.22
361 lizards T.scincoides (hap2 2024) Tiliqua scincoides GCF_035046505.1_rTilSci1.hap2 350 1,623,332,312 372 74,400 37.07
362 lizards U.stansburiana (SF-2025a 2026) Uta stansburiana GCA_055773955.1_UCM_Usta_1 104 2,104,442,790 113 56,046 50.77
363 lizards V.acanthurus (MtIsa-1 2025) Varanus acanthurus GCA_050042745.1_ZJU_Vac_2.0 2,573 1,546,074,419 3,351 939,599 37.59
364 lizards X.vigilis (SCLL12 2025) Xantusia vigilis GCA_051940855.1_ASM5194085v1 21 2,383,980,617 112 11,200 41.87
365 loggerhead turtle (hap1 2025 genbank) Caretta caretta GCA_965140235.1_rCarCar1.hap1 36 2,217,236,305 61 583,717 34.66
366 loggerhead turtle (hap1 2025 refseq) Caretta caretta GCF_965140235.1_rCarCar1.hap1 36 2,217,236,305 61 583,717 34.66
367 loggerhead turtle (hap2 2025) Caretta caretta GCA_965140275.1_rCarCar1.hap2 33 2,206,382,585 52 686,059 34.41
368 loggerhead turtle (v1 SJ_126:Eziel1 2022) Caretta caretta GCF_023653815.1_GSC_CCare_1.0 2,008 2,134,012,717 745 2,128,794 33.92
369 loggerhead turtle (v2 SJ_126:Eziel1 2022) Caretta caretta GCF_023653815.2_GSC_CCare_1.0 2,007 2,133,995,980 744 2,128,694 33.92
370 longcomb sawfish (2026) Pristis zijsron GCA_988281235.1_Pristis_zijsron_haplotype_1_assembly 357 2,433,300,514 759 148,800 56.05
371 Madagascar ground gecko (Pp20150507F 2025) Paroedura picta GCF_049243985.1_Ppicta_v3.0 80 1,751,518,920 2,618 18,643,685 49.69
372 mainland tiger snake Notechis scutatus GCF_900518725.1_TS10Xv2-PRI 52,414 1,665,525,958 79,478 80,606,990 40.26
373 mainland tiger snake (Mainland UNSWTSFEM 2025) Notechis scutatus GCF_049901735.1_rNotScu1.2 202 1,533,955,903 945 94,401 48.67
374 Mandarin rat snake (2026) Euprepiophis mandarinus GCA_057127995.1_CDU_Eman_1 56 1,650,598,725 34 3,400 54.66
375 many-banded krait (BM01 2022) Bungarus multicinctus GCA_023653725.1_ASM2365372v1 448 1,593,755,901 1,631 11,947,689 40.99
376 map turtle (NorthernMapTurtle01 primary hap 2025) Graptemys geographica GCA_037349215.2_rGraGeo1_p1.2 59 2,225,189,681 301 57,400 44.50
377 marbled electric ray (2025) Torpedo marmorata GCA_977017645.1_sTorMar1.1 4,566 6,221,104,460 3,402 349,900 78.63
378 marbled whiptail (SIMRID8450 2020) Aspidoscelis marmoratus GCA_014337955.1_AspMar1.0 3,826 1,639,530,780 166,840 92,948,330 33.03
379 marine toad (2024) Rhinella marina GCA_900303285.2_aRhiMar1.3 7,124 3,473,313,001 6,072 8,571,329 73.70
380 massasauga (EasternMassasaugaR01 primary hap 2024) Sistrurus catenatus GCA_039880765.1_rSisCat1_p1.0 179 1,559,847,505 1,293 255,900 54.51
381 McCord's box turtle (ISIS_951048 2018) Cuora mccordi GCA_003846335.1_ASM384633v1 91,872 2,382,737,048 50,040 129,458,769 44.90
382 meadow viper (alternate hap 2022) Vipera ursinii GCA_947247025.1_rVipUrs1.1_alternate_haplotype 9,575 1,180,062,022 12 2,400 41.76
383 meadow viper (primary hap 2022) Vipera ursinii GCA_947247035.1_rVipUrs1.1 384 1,625,023,540 1,819 363,800 45.37
384 Mediterranean moray (2026) Muraena helena GCA_978019965.1_fMurHel1.1 73 2,057,130,820 58 7,900 41.10
385 Mediterranean spur-thighed tortoise (T. g. whitei from Iberian southeast TG-2024a 2024) Testudo graeca GCA_040782865.1_ASM4078286v1 82,172 2,321,852,339 516,400 125,305,354 47.42
386 Mexican burrowing toad (hap1 2024) Rhinophrynus dorsalis GCA_037306005.1_aRhiDor1.hap1 464 4,745,569,335 2,032 406,419 53.56
387 Mexican burrowing toad (hap2 2024) Rhinophrynus dorsalis GCA_037306015.1_aRhiDor1.hap2 656 4,535,323,468 2,009 401,800 53.02
388 Mexican gopher tortoise (maternal hap 2022) Gopherus flavomarginatus GCA_025201925.1_rGopFla2.mat.asm 622 2,460,558,587 1,866 89,638,462 50.28
389 Mexican gopher tortoise (WGS:JAMKFC01 2022) Gopherus flavomarginatus GCF_025201925.1_rGopFla2.mat.asm 621 2,460,542,086 1,866 89,638,462 34.69
390 Mexican gopher tortoise (WGS:JAMKFD01 2022) Gopherus flavomarginatus GCA_025201965.1_rGopFla2.pat.asm 2,992 2,584,697,711 1,790 116,054,540 34.08
391 Mexican spadefoot toad (hap1 2026) Spea multiplicata GCA_054668525.1_aSpeMul1.hap1 504 959,415,552 267 44,200 40.92
392 Mexican spadefoot toad (hap2 2026) Spea multiplicata GCA_054668515.1_aSpeMul1.hap2 292 940,088,435 264 44,500 40.19
393 mimic poison frog (alternate hap 2023) Ranitomeya imitator GCA_032442605.1_aRanImi1.alt 2 4,262,647 0 0 56.37
394 mimic poison frog (primary hap 2023 genbank) Ranitomeya imitator GCA_032444005.1_aRanImi1.pri 1,673 5,956,630,009 765 80,159 77.60
395 mimic poison frog (primary hap 2023 refseq) Ranitomeya imitator GCF_032444005.1_aRanImi1.pri 1,672 5,956,610,564 765 80,159 76.48
396 Mississippi paddlefish Polyodon spathula GCF_017654505.1_ASM1765450v1 4,235 1,542,083,420 2,963 1,696,468 36.87
397 monk skink (Spon3 2026) Spondylurus monae GCA_056884205.1_ASM5688420v1 21 1,397,500,864 3,182,004 3,320,373 33.23
398 Montpellier snake (2024) Malpolon monspessulanus GCA_964265115.1_rMalMon1.1 61 1,752,167,081 80 16,000 53.45
399 Moorish gecko (Portugal Tar1 2026) Tarentola mauritanica GCA_056320045.1_ASM5632004v1 82 2,118,564,431 120 20,000 44.64
400 Murray river turtle (Brisbane River MOO-44397 2024) Emydura macquarii macquarii GCF_026122565.2_CSIRO-AGI_Emac_v2 3,735 1,924,425,589 0 0 25.44
401 natterjack toad (hap1.1 2026) Epidalea calamita GCA_978041865.1_aEpiCal4.hap1.1 549 3,713,531,970 566 73,600 76.77
402 natterjack toad (hap2.1 2026) Epidalea calamita GCA_978041805.1_aEpiCal4.hap2.1 535 3,711,998,431 542 67,400 76.84
403 nervous shark (hap1 2026) Carcharhinus cautus GCA_988281195.1_Carcharhinus_cautus_haplotype_1_assembly 859 3,067,276,070 2,005 398,200 66.00
404 Nile crocodile (hap1 2026) Crocodylus niloticus GCA_054954115.1_rCroNil1.hap1 123 2,340,765,025 36 6,300 41.31
405 Nile crocodile (hap2 2026) Crocodylus niloticus GCA_054825085.1_rCroNil1.hap2 73 2,344,593,006 51 8,300 41.23
406 northern rubber boa (HBS 135849 alternate hap 2022) Charina bottae GCA_023362785.1_rChaBot1.0.a 224 1,703,974,979 84 8,400 42.47
407 northern rubber boa (HBS 135849 primary hap 2022) Charina bottae GCA_023362775.1_rChaBot1.0.p 289 1,804,939,834 85 8,500 42.87
408 northern wobbegong (sOreWar1 hap1 2026) Orectolobus wardi GCA_988240335.1_Orectolobus_wardi_haplotype_1_assembly 4,459 4,633,820,220 910 170,700 70.78
409 Northwestern pond turtle (WTP2003 alternate hap 2022) Actinemys marmorata GCA_022086895.1_rActMar1.a 2,508 2,209,870,670 1,800 180,000 48.91
410 Northwestern pond turtle (WTP2003 primary hap 2022) Actinemys marmorata GCA_022086475.1_rActMar1.p 48 2,301,118,547 148 14,823 48.89
411 nurse shark (FLO180531 2022) Ginglymostoma cirratum GCA_024137785.1_ASM2413778v1 289 4,357,855,346 68,882 1,884,183,983 37.20
412 ocellate spot skate (KY-2023 2024) Okamejei kenojei GCA_035221665.1_ASM3522166v1 1,141 2,756,528,269 4,692 2,142,612 68.48
413 olive python (hap1 2023) Liasis olivaceus GCA_030867105.1_rLiaOli1.hap1 43 1,486,119,866 73 297,716 30.16
414 olive python (hap1 2026) Liasis olivaceus olivaceus GCA_057929095.1_rLiaOli2.hap1 46 1,486,338,808 40 7,000 39.37
415 olive python (hap2 2023) Liasis olivaceus GCA_030867085.1_rLiaOli1.hap2 65 1,478,263,624 93 5,065,312 29.98
416 olive python (hap2 2026) Liasis olivaceus olivaceus GCA_057929265.1_rLiaOli2.hap2 45 1,486,049,247 39 6,900 39.36
417 olive-headed seasnake (Western Australia SAMAR72044 2023) Hydrophis major GCA_033807585.1_HMAJ_1.0 1,320 2,166,703,382 477 47,700 61.81
418 Pacific lamprey (Columbia River large-bodied, stream-maturing ecotype CRITFC18_GStd-0006 2020) Entosphenus tridentatus GCA_014621495.2_ETRf_v1 141,124 927,744,424 63,604 129,406,369 45.62
419 Pacific ridley (hap1 2025 genbank) Lepidochelys olivacea GCA_965140295.1_rLepOli2.hap1 44 2,206,585,630 69 387,990 34.74
420 Pacific ridley (hap1 2025 refseq) Lepidochelys olivacea GCF_965140295.1_rLepOli2.hap1 43 2,206,568,898 69 387,990 50.14
421 Pacific ridley (hap2 2025) Lepidochelys olivacea GCA_965140255.1_rLepOli2.hap2 40 2,208,046,144 76 899,288 34.74
422 painted frog (alternate hap 2022) Discoglossus pictus GCA_027410455.1_aDisPic1.alt 4,005 1,937,156,624 76 1,862 53.01
423 painted frog (primary hap 2022) Discoglossus pictus GCA_027410445.1_aDisPic1.pri 1,318 3,872,602,052 3,681 62,395,995 55.23
424 palmate newt (alternate hap 2024) Lissotriton helveticus GCA_964258895.1_aLisHel1.1_alternate_haplotype 233,719 20,159,769,239 123 24,600 49.23
425 palmate newt (primary hap 2024) Lissotriton helveticus GCA_964261635.1_aLisHel1.1 448 23,170,028,842 5,245 1,049,000 63.58
426 palmate newt (primary hap 2026) Lissotriton helveticus GCA_964261635.2_aLisHel1.2 448 23,170,028,842 5,245 1,049,000 47.60
427 Papuan ground boa (hap1 2024) Candoia aspera GCA_035125265.1_rCanAsp1.hap1 180 1,529,331,567 99 19,800 33.58
428 Papuan ground boa (hap2 2024 genbank) Candoia aspera GCA_035149785.1_rCanAsp1.hap2 150 1,530,827,941 101 20,200 33.56
429 Papuan ground boa (hap2 2024 refseq) Candoia aspera GCF_035149785.1_rCanAsp1.hap2 149 1,530,810,380 101 20,200 33.56
430 Peter's clawed frog (maternal hap 2024) Xenopus petersii GCA_038501915.1_aXenPet1.maternal.cur 1,183 2,613,116,200 1,072 214,400 44.51
431 Peter's clawed frog (paternal hap 2024) Xenopus petersii GCA_038501925.1_aXenPet1.paternal.cur 888 2,883,796,191 500 100,000 45.47
432 pigmy rattlesnake (DRR0055 2026) Sistrurus miliarius GCA_062034332.1_ASM62034332v1 2,674 1,562,825,770 3,422 342,200 53.60
433 pitted-shelled turtle (YL-2023 2023 genbank) Carettochelys insculpta GCA_033958435.1_ASM3395843v1 134 2,180,317,067 12 2,400 47.95
434 pitted-shelled turtle (YL-2023 2023 refseq) Carettochelys insculpta GCF_033958435.1_ASM3395843v1 135 2,180,333,506 12 2,400 34.14
435 plains spadefoot toad (alternate hap 2022) Spea bombifrons GCA_027382365.2_aSpeBom1.2.alt 1,516 785,569,511 0 0 34.39
436 plains spadefoot toad (primary hap 2022 genbank) Spea bombifrons GCA_027358695.2_aSpeBom1.2.pri 17 987,655,159 102 3,822,643 41.92
437 plains spadefoot toad (primary hap 2022 refseq) Spea bombifrons GCF_027358695.1_aSpeBom1.2.pri 17 987,655,159 102 3,822,643 36.29
438 plateau brown frog (CW2021 2023) Rana kukunoris GCA_029574335.1_ASM2957433v1 2,983 4,830,730,561 3,572 357,200 78.70
439 pool frog (hap1 2025 genbank) Pelophylax lessonae GCA_965119305.1_aPelLes1.hap1.1 1,328 5,811,246,175 3,044 608,800 60.24
440 pool frog (hap1 2025 refseq) Pelophylax lessonae GCF_965119305.1_aPelLes1.hap1.1 1,328 5,811,246,175 3,044 608,800 60.24
441 pool frog (hap2 2025) Pelophylax lessonae GCA_965119315.1_aPelLes1.hap2.1 977 5,762,139,629 2,703 540,600 60.12
442 porcupine ray (hap1 2026) Urogymnus asperrimus GCA_988281385.1_Urogymnus_asperrimus_haplotype_1_assembly 488 3,617,960,548 377 70,200 67.09
443 Potamotrygon marinae (hap2 2026) Potamotrygon marinae GCA_055471215.1_sPotMar1.hap2 759 4,335,674,344 1,012 187,400 73.72
444 pouched lamprey (GAM24_3 2026) Geotria australis GCA_062014767.1_UKy_Geoaus_24M3.pri1.0 419 790,691,722 135 20,200 49.22
445 prickly gecko (False Entrance Well CCM8104 2023) Heteronotia binoei GCF_032191835.1_APGP_CSIRO_Hbin_v1 661 2,633,472,656 1,608 160,800 46.85
446 prickly shark (hap1 2026) Echinorhinus cookei GCA_057877045.1_sEchCoo1.hap1 3,906 6,948,280,430 5,153 1,011,900 77.54
447 prickly shark (hap2 2026) Echinorhinus cookei GCA_057876775.1_sEchCoo1.hap2 2,205 6,098,479,163 4,924 970,000 75.22
448 Puerto Rican coqui (hap1 2024 refseq) Eleutherodactylus coqui GCF_035609145.1_aEleCoq1.hap1 956 3,371,297,528 659 131,800 54.01
449 Puerto Rican coqui (hap2 2024) Eleutherodactylus coqui GCA_035609135.1_aEleCoq1.hap2 827 3,362,534,901 685 137,000 53.92
450 Puget Sound dogfish (hap1 2025) Squalus suckleyi GCA_050613905.1_sSquSuc5.hap1 3,203 5,298,610,218 4,275 828,744 70.15
451 Puget Sound dogfish (hap2 2025) Squalus suckleyi GCA_050613895.1_sSquSuc5.hap2 1,862 4,657,981,142 4,144 798,800 67.98
452 ray-finned fishes P.merretti (hap1 2026) Polyacanthonotus merretti GCA_057931045.1_fPolMer1.hap1 126 1,263,517,065 278 53,500 34.76
453 ray-finned fishes P.merretti (hap2 2026) Polyacanthonotus merretti GCA_057931065.1_fPolMer1.hap2 71 1,112,681,316 236 45,600 33.68
454 red coachwhip (AS-2025 2026) Masticophis piceus GCA_060497075.1_ASM6049707v1 120 1,614,300,925 6 600 53.06
455 red stingray (2025) Hemitrygon akajei GCF_048418815.1_sHemAka1.3 261 4,229,649,561 2,066 214,268,171 49.67
456 red-eared slider turtle Trachemys scripta elegans GCF_013100865.1_CAS_Tse_1.0 138 2,126,199,303 25,390 82,148,119 30.75
457 reedfish (primary hap 2021) Erpetoichthys calabaricus GCA_900747795.4_fErpCal1.3 169 3,613,551,089 1,431 29,707,657 62.17
458 reedfish (v3 alternate hap 2021) Erpetoichthys calabaricus GCA_900700845.3_fErpCal1.3_alternate_haplotype 17,082 3,014,944,822 17 314,459 46.95
459 Reeve's moray (2022-ZK-DYW-LXS-MUSCLE-01 2023) Gymnothorax reevesii GCA_029721435.1_ASM2972143v1 423 2,174,377,324 146 14,600 64.29
460 Reeves's turtle Mauremys reevesii GCF_016161935.1_ASM1616193v1 230 2,367,607,229 398 39,800 34.64
461 Riggenbach's reed frog (alternate hap 2024) Hyperolius riggenbachi GCA_040937895.1_aHypRig1.alt 14,077 9,708,340,052 19 3,635 71.57
462 Riggenbach's reed frog (primary hap 2024 genbank) Hyperolius riggenbachi GCA_040937935.1_aHypRig1.pri 477 4,915,935,452 3,039 606,696 60.27
463 Riggenbach's reed frog (primary hap 2024 refseq) Hyperolius riggenbachi GCF_040937935.1_aHypRig1.pri 477 4,915,935,452 3,039 606,696 60.27
464 Ringneck snake (HBS135679 primary hap 2022) Diadophis punctatus similis GCA_023053685.1_rDiaPun1.0.p 444 1,783,023,707 723 72,300 48.68
465 roundjaw bonefish (hap1 2026) Albula glossodonta GCA_056783665.1_fAlbGlo1.hap1 146 985,776,387 65 13,000 24.04
466 roundjaw bonefish (hap2 2026) Albula glossodonta GCA_056776265.1_fAlbGlo1.hap2 87 980,179,236 57 11,400 23.59
467 Roux's giant gecko (US-hobby MAAG-2026a 2026) Correlophus sarasinorum GCA_058969105.1_USC_Csar_1.0 36 1,652,385,365 16 1,600 37.74
468 royal ground snake (hap1 2023 refseq) Erythrolamprus reginae GCF_031021105.1_rEryReg1.hap1 400 1,964,049,041 1,391 278,200 59.53
469 royal ground snake (hap2 2023) Erythrolamprus reginae GCA_031021085.1_rEryReg1.hap2 1,128 2,038,227,610 0 0 53.01
470 royal ground snake (hap3 2023) Erythrolamprus reginae GCA_031001685.1_rEryReg1.hap3 3,543 2,090,234,102 0 0 57.37
471 rufous frog (hap1 2023) Leptodactylus fuscus GCA_031893025.1_aLepFus1.hap1 2,266 2,307,711,212 973 11,371,605 55.98
472 rufous frog (hap2 2023 genbank) Leptodactylus fuscus GCA_031893055.1_aLepFus1.hap2 1,266 2,197,996,823 976 20,381,759 59.61
473 rufous frog (hap2 2023 refseq) Leptodactylus fuscus GCF_031893055.1_aLepFus1.hap2 1,265 2,197,979,350 976 20,381,759 54.16
474 rufous frog (hap2 2026) Leptodactylus fuscus GCA_031893055.2_aLepFus1.hap2 1,265 2,197,979,350 976 20,381,759 62.44
475 Sabana Surinam toad (BJE4294 2021) Pipa parva GCA_019650415.1_UCB_Ppar_1.0 283,592 1,370,893,480 67,859 8,173,599 36.83
476 San Diegan legless lizard (HBS135921 alternate hap 2023) Anniella stebbinsi GCA_029215795.1_rAnnSte1.0.hap2 91 1,891,076,299 31 3,100 39.31
477 San Diegan legless lizard (HBS135921 primary hap 2023) Anniella stebbinsi GCA_029215775.1_rAnnSte1.0.hap1 134 1,890,507,581 21 2,100 39.04
478 San Diegan tiger whiptail (alternate hap HBS 135688 2022) Aspidoscelis tigris stejnegeri GCA_023333555.1_rAspTig1.0.a 227 1,675,887,475 44 4,400 39.22
479 San Diegan tiger whiptail (v1.1 HBS 135688 primary hap 2025) Aspidoscelis tigris stejnegeri GCA_023333525.2_rAspTig1.1.pri 186 1,673,115,766 110 11,000 39.12
480 San Diego alligator lizard (HBS135686 alternate hap 2022) Elgaria multicarinata webbii GCA_023053675.1_rElgMul1.0.a 627 1,810,359,265 27 2,700 40.46
481 San Diego alligator lizard (v1.0 HBS135686 primary hap 2022) Elgaria multicarinata webbii GCA_023053635.1_rElgMul1.0.p 85 1,790,509,355 23 2,300 40.44
482 San Diego alligator lizard (v1.1 HBS135686 primary hap 2024 genbank) Elgaria multicarinata webbii GCA_023053635.2_rElgMul1.1.pri 35 1,790,519,499 73 12,700 40.44
483 San Diego alligator lizard (v1.1 HBS135686 primary hap 2024 refseq) Elgaria multicarinata webbii GCF_023053635.1_rElgMul1.1.pri 34 1,790,500,004 73 12,700 40.44
484 San Diego ringneck snake (HBS135679 alternate hap 2022) Diadophis punctatus similis GCA_023053665.1_rDiaPun1.0.a 2,064 1,577,714,162 572 57,200 50.64
485 sand lizard (alternate hap 2019) Lacerta agilis GCA_009819545.1_rLacAgi1.alt 12,660 1,429,379,209 2 120 34.27
486 sand lizard (primary hap 2019) Lacerta agilis GCF_009819535.1_rLacAgi1.pri 29 1,391,404,169 379 3,491,078 34.50
487 sand tiger shark (hap1 2026) Carcharias taurus GCA_055471155.1_sCarTau1.hap1 1,711 4,806,495,879 1,643 7,797,640 67.51
488 sand tiger shark (hap2 2026) Carcharias taurus GCA_055471145.1_sCarTau1.hap2 1,171 4,482,499,012 1,534 10,159,098 67.21
489 sand viper (VAMM-2024 2025) Vipera ammodytes GCA_047301725.1_DTU_Vamm_2.0 24 1,545,746,728 244 23,608 42.35
490 Sardinian treefrog (hap1 2023 refseq) Hyla sarda GCF_029499605.1_aHylSar1.hap1 3,474 4,142,159,359 2,297 459,227 64.33
491 Sardinian treefrog (hap2 2023) Hyla sarda GCA_029493135.1_aHylSar1.hap2 2,802 4,080,080,015 2,097 419,128 63.87
492 Schlegel's Japanese gecko (2015) Gekko japonicus GCF_001447785.1_Gekko_japonicus_V1.1 191,500 2,490,274,461 143,970 88,227,448 39.16
493 sea lamprey (alternate hap 2020) Petromyzon marinus GCA_010993595.1_kPetMar1.alt 4,064 841,632,067 11 24,549 49.81
494 sea lamprey (Great Lakes invasive population PM22_M1 alternate hap 2025) Petromyzon marinus GCA_048941845.1_UKy_Petmar_22M1.alt1.0 7,128 1,256,618,650 0 0 65.21
495 sea lamprey (Great Lakes invasive population PM22_M1 primary hap 2025 genbank) Petromyzon marinus GCA_048934315.1_UKy_Petmar_22M1.pri1.0 1,203 1,808,332,251 992 99,200 68.15
496 sea lamprey (Great Lakes invasive population PM22_M1 primary hap 2025 refseq) Petromyzon marinus GCF_048934315.1_UKy_Petmar_22M1.pri1.0 1,204 1,808,348,452 992 99,200 68.17
497 sea lamprey (primary hap 2020) Petromyzon marinus GCF_010993605.1_kPetMar1.pri 1,434 1,089,050,413 930 15,013,687 50.62
498 sharks & rays (2211 2026) Narcine brasiliensis GCA_060307235.1_LBGP_Nbra_1.0 1,562 3,142,242,525 533 52,400 51.72
499 sharks & rays (SO-2025 2026) Fontitrygon garouaensis GCA_054367945.1_ASM5436794v1 1,158 4,164,957,080 1,288 128,800 67.05
500 sharpnose sevengill shark (hap1 2024 genbank) Heptranchias perlo GCA_035084215.1_sHepPer1.hap1 1,880 3,249,935,392 1,834 366,800 57.50
501 sharpnose sevengill shark (hap1 2024 refseq) Heptranchias perlo GCF_035084215.1_sHepPer1.hap1 1,879 3,249,915,908 1,834 366,800 57.50
502 sharpnose sevengill shark (v1 hap2 2024) Heptranchias perlo GCA_035084135.1_sHepPer1.hap2 1,194 3,059,754,027 1,695 339,000 55.71
503 sharpnose sevengill shark (v2 hap2 2024) Heptranchias perlo GCA_035084135.2_sHepPer1.hap2 1,143 3,087,787,698 1,771 354,200 56.06
504 Shaw's sea snake (ss_UAE728 2024) Hydrophis curtus GCA_037043045.1_ASM3704304v1 809 1,925,084,451 641 1,254,247 51.54
505 shortnose gar (hap1 2026 genbank) Lepisosteus platostomus GCA_059453375.1_fLepPlt1.hap1 270 1,223,166,726 45 9,000 38.51
506 shortnose gar (hap1 2026 refseq) Lepisosteus platostomus GCF_059453375.1_fLepPlt1.hap1 269 1,223,150,431 45 9,000 42.68
507 shortnose gar (hap2 2026) Lepisosteus platostomus GCA_059453405.1_fLepPlt1.hap2 214 1,159,351,646 53 10,600 36.60
508 Siamese crocodile (JL-2025a 2025) Crocodylus siamensis GCA_052110815.1_ASM5211081v1 744 2,128,057,549 676 67,600 41.76
509 Siberian wood frog (spRanAmu-1000001404 2026) Rana amurensis GCA_060496945.1_BTC_Ramu_2 680 4,710,493,530 343 34,300 77.40
510 silver chimaera (sChiPha1 2026) Chimaera phantasma GCA_057930315.1_sChiPha1.1 2,093 1,009,572,152 850 425,000 45.10
511 silvertip shark (SJ-STS2025 2026) Carcharhinus albimarginatus GCA_062034296.1_ASM62034296v1 41 2,891,087,336 27,574 134,751,950 62.19
512 Skyros wall lizard (hap1.2 2024) Podarcis gaigeae GCF_964106915.1_rPodGai1.hap1.2 211 1,514,643,635 883 176,600 51.29
513 Skyros wall lizard (hap2.1 2024) Podarcis gaigeae GCA_964106785.1_rPodGai1.hap2.1 127 1,422,314,362 783 156,600 37.52
514 Skyros wall lizard (v1 hap1 2024) Podarcis gaigeae GCA_964106915.1_rPodGai1.hap1.1 211 1,514,643,635 883 176,600 38.22
515 Skyros wall lizard (v2 hap1 2024) Podarcis gaigeae GCA_964106915.2_rPodGai1.hap1.2 211 1,514,643,635 883 176,600 38.22
516 small-eyed ray (hap1.1 2026) Raja microocellata GCA_982319585.1_sRajMic1.hap1.1 4,225 2,992,192,526 2,689 284,400 72.32
517 small-eyed ray (hap2.1 2026) Raja microocellata GCA_982319545.1_sRajMic1.hap2.1 2,828 2,928,506,381 2,688 274,300 71.90
518 small-spotted catshark (primary hap 2021) Scyliorhinus canicula GCF_902713615.2_sScyCan1.2 646 4,220,406,627 7,146 64,220,747 72.29
519 smaller spotted catshark (alternate hap 2021) Scyliorhinus canicula GCA_902713625.2_sScyCan1.2_alternate_haplotype 26,649 3,867,000,599 6 319 51.57
520 smaller spotted catshark (v1.2 primary hap 2021 genbank) Scyliorhinus canicula GCA_902713615.2_sScyCan1.2 645 4,220,389,930 7,146 64,220,747 51.42
521 smalltooth sawfish (alternate hap 2019) Pristis pectinata GCA_009764485.1_sPriPec2.alt 10,892 1,694,166,684 0 0 38.34
522 smalltooth sawfish (primary hap 2019) Pristis pectinata GCA_009764475.2_sPriPec2.1.pri 173 2,267,857,790 698 20,562,876 54.49
523 smalltooth sawfish (v2.1 primary hap 2019 refseq) Pristis pectinata GCF_009764475.1_sPriPec2.1.pri 172 2,267,840,987 698 20,562,876 54.48
524 smooth skate (SmoothSkate02 primary hap 2024) Malacoraja senta GCA_038087875.1_sMalSen1_p1.0 6,182 1,943,532,728 13,092 2,618,400 72.51
525 snake B.irregularis (Birr_Female4 2026) Boiga irregularis GCA_056881965.1_Birr_Maternal_haplotype 433 1,654,139,717 224 21,435 56.98
526 snake C.gasperettii (CG1 2025) Cerastes gasperettii GCA_046524025.1_ASM4652402v1 222 1,632,742,855 792 290,571 44.15
527 snake L.rosozonatus (Hainan Island endemic population YBU250033 2026) Lycodon rosozonatus GCA_061240095.1_ASM6124009v1 71 1,736,067,228 57 11,400 55.93
528 snake M.schweizeri (rMacScw1.hap1.1 2025) Macrovipera schweizeri GCA_965194845.1_rMacScw1.hap1.1 535 1,635,282,602 1,364 143,600 51.95
529 snake N.helvetica (hap1.1 2024) Natrix helvetica GCA_964273705.1_rNatHel1.hap1.1 487 1,777,516,490 2,010 402,000 46.17
530 snake N.helvetica (hap2.1 2024) Natrix helvetica GCA_964273795.1_rNatHel1.hap2.1 502 1,513,526,581 1,674 334,800 43.90
531 snake P.spiloides (GreyRatsnake01 primary hap 2026) Pantherophis spiloides GCA_037575465.2_rPanSpi1_p1.2 90 1,889,739,481 311 61,400 55.81
532 snake R.lateralis (Jilin DL-2025a 2026) Rhabdophis lateralis GCA_062024719.1_ASM62024719v1 447 2,107,399,878 1,025 512,500 59.18
533 Somali helmeted turtle (alternate hap 2025) Pelomedusa somalica GCA_051311595.1_rPelSom1.alt 1,298 1,942,434,905 0 0 40.70
534 Somali helmeted turtle (primary hap 2025) Pelomedusa somalica GCA_051311615.1_rPelSom1.pri 67 1,948,856,296 85 2,048,540 40.71
535 South American lungfish (Aquarium Glaser DD20211129a alternate hap 2024) Lepidosiren paradoxa GCA_040438655.1_ASM4043865v1 1,072,861 46,159,945,069 0 0 81.39
536 southeastern chorus frog (ECM19152 2026) Pseudacris feriarum GCA_058322085.1_FSU_Pfer_1.0 46,493 4,010,132,070 21,585 10,566,098 66.12
537 Southern California legless lizard (HBS135921 hap1 2026) Anniella stebbinsi GCA_051312515.2_rAnnSte1.2_hap1 55 1,885,870,326 67 6,700 46.70
538 Southern California legless lizard (HBS135921 hap2 2026) Anniella stebbinsi GCA_051312545.2_rAnnSte1.2_hap2 43 1,893,391,702 83 8,300 46.86
539 southern Darwin's frog (hap1 2025) Rhinoderma darwinii GCA_050947455.1_aRhiDar2.hap1 2,943 3,657,529,801 1,606 312,300 63.44
540 Southern dwarf chameleon (Gauteng JTBG20232 2024) Bradypodion ventrale GCA_035047345.1_BraVen1.1 113 2,373,187,502 22 2,189 54.44
541 Southern Pacific rattlesnake (HBS135844 alternate hap 2022) Crotalus helleri GCA_024509165.1_rCroOre1.a 340 1,628,461,744 34 782 44.44
542 Southern Pacific rattlesnake (HBS135844 primary hap 2022) Crotalus helleri GCA_024509115.1_rCroOre1.0.p 696 1,564,714,769 443 221,500 44.94
543 Southwestern pond turtle (HBS135687 alternate hap 2022) Actinemys pallida GCA_023634275.1_rActPal1.0.a 260 2,348,990,949 64 6,400 36.29
544 Southwestern pond turtle (HBS135687 primary hap 2022) Actinemys pallida GCA_023634205.1_rActPal1.0.p 53 2,326,928,347 53 5,300 36.13
545 spiny dogfish (Lynn of Lorn, Scotland, UK JT-UK-2019 2023) Squalus acanthias GCA_030390025.1_ASM3039002v1 3,882 3,713,488,297 5,471 1,925,263 62.22
546 spotted gar Lepisosteus oculatus GCF_000242695.1_LepOcu1 1,925 945,874,548 43,276 76,460,189 22.84
547 spotted gar (hap1 2024) Lepisosteus oculatus GCA_040954845.1_fLepOcu1.hap1 831 1,110,649,520 76 15,200 34.48
548 spotted gar (hap2 2024 genbank) Lepisosteus oculatus GCA_040954835.1_fLepOcu1.hap2 817 1,200,606,178 95 19,000 38.22
549 spotted gar (hap2 2024 refseq) Lepisosteus oculatus GCF_040954835.1_fLepOcu1.hap2 816 1,200,589,847 95 19,000 38.23
550 spotted moray (2026) Gymnothorax moringa GCA_978019835.1_fGymMor1.1 115 1,994,637,259 71 9,200 38.88
551 spotted ratfish (hap1 2024) Hydrolagus colliei GCA_035084065.1_sHydCol1.hap1 1,042 1,097,847,766 2,088 417,600 44.94
552 spotted ratfish (hap2 2024) Hydrolagus colliei GCA_035084275.1_sHydCol1.hap2 532 1,003,172,678 1,952 390,400 44.82
553 spotted ray (hap1.1 2026) Raja montagui GCA_980250545.1_sRajMon1.hap1.1 4,542 2,761,524,045 3,030 606,000 69.88
554 spotted ray (hap2.1 2026) Raja montagui GCA_980251185.1_sRajMon1.hap2.1 3,918 2,769,174,886 2,873 574,600 69.87
555 spotted thorius (hap1 2026) Thorius spilogaster GCA_060511645.1_aThoSpi2.hap1 6,194 26,094,357,440 1,347 262,600 55.57
556 starry smooth-hound (hap1.1 2024) Mustelus asterias GCA_964213995.1_sMusAst1.hap1.1 5,314 3,679,792,345 3,590 718,000 54.95
557 starry smooth-hound (hap2.1 2024) Mustelus asterias GCA_964214025.1_sMusAst1.hap2.1 4,403 3,476,679,425 3,505 701,000 53.51
558 starry smooth-hound shark (hap1.1 2024) Mustelus asterias GCF_964213995.1_sMusAst1.hap1.1 5,313 3,679,774,521 3,590 718,000 54.95
559 Stejneger's bamboo snake (YBU240039 2025) Pseudoxenodon stejnegeri GCA_050613815.1_CDU_Pste_1 617 1,600,572,231 43 4,300 51.85
560 sterlet (v2 Gen_M01 2020) Acipenser ruthenus GCF_010645085.2_ASM1064508v2 3,368 1,825,187,678 6,251 1,247,812 43.29
561 Suwannee snapping turtle (hap1 2023) Macrochelys suwanniensis GCA_033296515.1_rMacSuw1.hap1 366 2,132,261,265 290 58,000 33.43
562 Suwannee snapping turtle (hap2 2023) Macrochelys suwanniensis GCA_033349115.1_rMacSuw1.hap2 199 1,937,254,095 361 72,200 32.82
563 tailed frog (A.truei hap1 2024 genbank) Ascaphus truei GCA_040206685.1_aAscTru1.hap1 3,549 3,722,616,900 6,020 1,204,076 55.73
564 tailed frog (A.truei hap1 2024 refseq) Ascaphus truei GCF_040206685.1_aAscTru1.hap1 3,549 3,722,616,900 6,020 1,204,076 55.73
565 tailed frog (A.truei hap2 2024) Ascaphus truei GCA_040206675.1_aAscTru1.hap2 2,779 3,660,446,095 6,023 1,204,703 55.25
566 tarantolino (hap1 2023) Euleptes europaea GCA_029931775.1_rEulEur1.hap1 592 1,781,933,648 153 4,045,040 53.70
567 thornback ray (hap1.1 2026) Raja clavata GCA_980434695.1_sRajCla2.hap1.1 1,860 2,720,701,907 2,667 280,600 68.94
568 thornback ray (hap2.1 2026) Raja clavata GCA_980432155.1_sRajCla2.hap2.1 3,232 2,829,124,408 2,703 276,700 69.62
569 thorny skate (alternate hap CabotCenter1 2020) Amblyraja radiata GCA_010909745.1_sAmbRad1.alt 21,992 1,462,441,988 3 94 57.78
570 thorny skate (v1.1 primary hap CabotCenter1 2020 genbank) Amblyraja radiata GCA_010909765.2_sAmbRad1.1.pri 958 2,558,801,738 3,753 190,972,533 63.69
571 thorny skate (v1.1 primary hap CabotCenter1 2020 refseq) Amblyraja radiata GCF_010909765.2_sAmbRad1.1.pri 957 2,558,784,953 3,753 190,972,533 52.28
572 three-toed box turtle Terrapene triunguis GCF_002925995.2_T_m_triunguis-2.0 48,497 2,562,212,628 53,635 131,526,270 31.74
573 tiger rattlesnake Crotalus tigris GCF_016545835.1_ASM1654583v1 4,228 1,612,002,213 0 0 42.93
574 tiger salamander (Tig_M23 2026) Ambystoma tigrinum GCA_061212105.1_UKY_AtigF1_1 3,754 29,974,357,795 1,920 381,800 65.76
575 tiny Cayenne caecilian (alternate hap 2019) Microcaecilia unicolor GCA_901765105.1_aMicUni1.1_alternate_haplotype 23,870 3,698,322,623 1 31 52.19
576 tiny cayenne caecilian (primary hap 2021) Microcaecilia unicolor GCF_901765095.2_aMicUni1.2 1,080 4,685,923,413 2,452 47,437,278 71.20
577 tiny Cayenne caecilian (v2 2021) Microcaecilia unicolor GCA_901765095.2_aMicUni1.2 1,081 4,685,939,421 2,452 47,437,278 52.44
578 tope shark (hap1 2025) Galeorhinus galeus GCA_977071755.1_sGalGal3_haplotype_1_assembly_v1 7,118 4,816,164,632 3,659 727,000 65.91
579 tope shark (hap1 2026) Galeorhinus galeus GCA_055755705.1_sGalGal3.hap1.cur.20240206 7,116 4,815,995,878 3,659 727,000 65.91
580 tope shark (hap2 2025) Galeorhinus galeus GCA_977071745.1_sGalGal3_haplotype_2_assembly_v1 37 2,685,485,351 1,556 289,000 52.58
581 Townsend's dwarf sphaero (gecko TG3544 2022) Sphaerodactylus townsendi GCF_021028975.2_MPM_Stown_v2.3 1,742 1,810,846,735 2,590 229,288 38.60
582 tropical clawed frog Xenopus tropicalis GCF_000004195.4_UCB_Xtro_10.0 167 1,451,301,209 684 2,839,231 41.76
583 Tungara frog (maternal hap 2024 refseq) Engystomops pustulosus GCF_040894005.1_aEngPut4.maternal 936 2,158,203,323 436 87,200 52.56
584 Tungara frog (paternal hap 2024) Engystomops pustulosus GCA_040894015.1_aEngPut4.paternal 819 2,081,032,022 507 101,225 52.62
585 Turks Islands skink (RGR3008 2026) Spondylurus turksae GCA_056884325.1_ASM5688432v1 21 1,397,427,385 2,560,899 2,649,844 33.47
586 turtles (Mexican musk turtle STRM 2024) Staurotypus triporcatus GCA_044707075.1_ASM4470707v1 29,375 1,751,894,025 171,804 121,876,045 33.05
587 two-lined caecilian (alternate hap 2019) Rhinatrema bivittatum GCA_901001175.1_aRhiBiv1.1_alternate_haplotype 27,231 4,615,304,139 2 63 43.78
588 two-lined caecilian (v1.2 primary hap 2021 genbank) Rhinatrema bivittatum GCA_901001135.2_aRhiBiv1.2 1,330 5,319,239,186 3,573 33,955,840 66.85
589 two-lined caecilian (v1.2 primary hap 2021 refseq) Rhinatrema bivittatum GCF_901001135.2_aRhiBiv1.2 1,329 5,319,222,779 3,573 33,955,840 44.11
590 Tyrrhenian wall lizard (hap1 2025 genbank) Podarcis tiliguerta GCA_965153285.1_rPodTil1.hap1.1 258 1,462,327,121 1,024 204,800 37.08
591 Tyrrhenian wall lizard (hap1 2025 refseq) Podarcis tiliguerta GCF_965153285.1_rPodTil1.hap1.1 258 1,462,327,121 1,024 204,800 49.67
592 Tyrrhenian wall lizard (hap2 2025) Podarcis tiliguerta GCA_965153305.1_rPodTil1.hap2.1 306 1,382,196,565 983 196,600 36.68
593 undulate ray (2026) Raja undulata GCA_980436725.1_sRajUnd1.1 1,253 2,933,668,520 2,543 269,800 71.53
594 valley gartersnake (HBS 135685 alternate hap 2023) Thamnophis sirtalis fitchi GCA_029207655.1_rThaSir1.0.hap2 226 1,683,046,358 403 40,300 45.12
595 valley gartersnake (HBS 135685 primary hap 2023) Thamnophis sirtalis fitchi GCA_029207665.1_rThaSir1.0.hap1 413 1,621,019,271 446 44,600 46.30
596 veiled chameleon (AJP-2024a 2024) Chamaeleo calyptratus GCA_043643385.1_ASM4364338v1 487 1,803,551,824 546 54,523 41.86
597 viperine water snake (2025) Natrix maura GCA_964659585.1_rNatMau1.1 210 1,738,090,269 75 15,000 54.68
598 viviparous/common lizard Zootoca vivipara GCF_011800845.1_UG_Zviv_1 25,252 1,464,300,591 51,275 43,421,287 34.22
599 warty newt (alternate hap 2024) Triturus cristatus GCA_964204665.1_aTriCri1.1_alternate_haplotype 179,455 11,940,550,875 338 67,600 52.19
600 warty newt (primary hap 2024 genbank) Triturus cristatus GCA_964204655.1_aTriCri1.1 1,304 22,324,633,092 4,698 939,600 50.89
601 warty newt (primary hap 2024 refseq) Triturus cristatus GCF_964204655.1_aTriCri1.1 1,303 22,324,616,549 4,698 939,600 50.89
602 wattle-necked softshell turtle (PAS_2024 2025) Palea steindachneri GCA_054135685.1_ASM5413568v1 74 2,225,109,576 21 4,200 47.03
603 West African lungfish (Aquarium Glaser DD20220218a alternate hap 2024) Protopterus annectens GCA_040939495.1_ASM4093949v1 65,665 19,769,795,207 0 0 57.35
604 West African lungfish (Aquarium Glaser DD20220218a primary hap 2024) Protopterus annectens GCA_040939525.1_ASM4093952v1 7,125 40,524,173,670 24,438 5,865,120 72.73
605 West African lungfish (FY-2018-M 2021) Protopterus annectens GCF_019279795.1_PAN1.0 12,668 40,054,341,269 0 993,106,966 70.73
606 western chorus frog (Ontario Canada JT22Mhap1 2026) Pseudacris triseriata GCA_053478255.2_aPseTri1.hap1 1,100 3,997,233,219 1,837 186,300 65.53
607 western chorus frog (Ontario Canada JT22Mhap2 2026) Pseudacris triseriata GCA_056512365.2_aPseTri1.hap2 759 3,952,191,458 1,846 184,600 65.61
608 western fence lizard (IW3139 2022) Sceloporus occidentalis GCA_023333635.1_rSceOcc1.0.a 1,771 3,186,658,811 51 5,100 40.63
609 western fence lizard (IW3139 primary hap 2022) Sceloporus occidentalis GCA_023333645.1_rSceOcc1.0.p 608 2,856,356,971 51 5,100 37.86
610 Western massasauga (CLP2594 2026) Sistrurus tergeminus GCA_062034334.1_Stergeminus_1.0 2,895 1,525,999,227 2,743 274,300 52.25
611 western painted turtle (hap1 R12L10 2024) Chrysemys picta bellii GCA_035221575.1_ASM3522157v1 5,376 2,336,887,892 2,300 576,246 47.33
612 western painted turtle (hap2 R12L10 2024) Chrysemys picta bellii GCA_035221595.1_ASM3522159v1 9,371 2,329,101,047 1,992 427,110 47.33
613 western painted turtle (R12L10 2023 refseq) Chrysemys picta bellii GCF_011386835.1_ASM1138683v2 9,850 2,372,089,908 1,270 541,410 47.39
614 western painted turtle (v5 RCT428 2020) Chrysemys picta bellii GCF_000241765.5_Chrysemys_picta_BioNano-3.0.4 74,775 2,480,260,873 184,311 309,640,510 39.11
615 western red-tailed skink (HBS 135693 alternate hap 2022) Plestiodon gilberti rubricaudatus GCA_026170595.1_rPleGil1.0.hap2 39 1,571,222,493 15 1,500 36.98
616 western red-tailed skink (HBS 135693 primary hap 2022) Plestiodon gilberti rubricaudatus GCA_026170395.1_rPleGil1.0.hap1 50 1,447,229,999 12 1,200 37.05
617 western spadefoot toad (2023) Pelobates cultripes GCA_933207985.1_aPelCul1.1_chrom 3,574 3,094,940,563 64,928 6,492,904 46.13
618 western spadefoot toad (hap1 HBS 135690 2023) Spea hammondii GCA_029215705.1_aSpeHam1.0.hap1 479 1,142,014,214 198 19,800 41.85
619 western spadefoot toad (hap2 HBS 135690 2023) Spea hammondii GCA_029215755.1_aSpeHam1.0.hap2 351 1,155,539,324 190 19,000 42.27
620 western terrestrial garter snake (alternate hap 2019) Thamnophis elegans GCA_009769695.1_rThaEle1.alt 13,623 1,814,330,211 19 1,330,160 43.98
621 western terrestrial garter snake (primary hap 2019 genbank) Thamnophis elegans GCA_009769535.1_rThaEle1.pri 365 1,672,190,305 1,518 38,185,703 42.64
622 western terrestrial garter snake (primary hap 2019 refseq) Thamnophis elegans GCF_009769535.1_rThaEle1.pri 365 1,672,190,305 1,518 38,185,703 42.64
623 whale shark (14 2022 Squalomix) Rhincodon typus GCF_021869965.1_sRhiTyp1.1 16,684 2,880,448,384 95,208 241,885,584 34.15
624 whale shark (Ralph 2017 Emory U) Rhincodon typus GCF_001642345.1_ASM164234v2 57,334 2,931,599,576 900,650 917,010 38.86
625 white-bellied softnose skate (Sanriku21f 2025) Rhinoraja longicauda GCF_053455715.1_sRhiLon1.1 3,942 2,198,843,048 5,336 2,667,105 62.39
626 whitespotted bambooshark Chiloscyllium plagiosum GCF_004010195.1_ASM401019v2 101,977 3,556,477,427 156,554 204,109,657 38.22
627 whitespotted bambooshark (BGI_BamShark_2017 2019) Chiloscyllium plagiosum GCA_004010195.1_ASM401019v1 601,049 3,776,550,609 159,245 204,247,630 39.30
628 whitespotted bambooshark (Xiang-an2024) Chiloscyllium plagiosum GCF_037043375.1_Cpla_swu_hap1 247 4,757,340,591 2,116 1,058,000 68.73
629 whitespotted conger (HY 2025) Conger myriaster GCA_047653785.1_ASM4765378v1 148 1,093,778,583 234 23,400 36.44
630 wood frog (aRanSyl1 2023) Lithobates sylvaticus GCA_028564925.1_aRanSyl1.merge 4,861 5,150,352,190 13,423 6,126,342 71.82
631 Wuis rock agama (Bomi SW-2024a 2024) Laudakia wui GCA_040285375.1_ASM4028537v1 18 1,779,364,323 52 26,000 44.29
632 yellow-bellied toad (maternal hap 2024) Bombina variegata GCA_964205305.1_aBomVar4.maternal.1 3,497 9,112,230,460 6,811 1,362,200 70.74
633 yellow-bellied toad (paternal hap 2024) Bombina variegata GCA_964205295.1_aBomVar4.paternal.1 4,757 9,369,791,316 6,671 1,334,200 70.82
634 yellow-spotted Amazon River turtle (alternate hap 2025) Podocnemis unifilis GCA_050000025.1_rPodUni1.alt 624 1,846,295,323 0 0 34.16
635 yellow-spotted Amazon River turtle (alternate hap 2026) Podocnemis unifilis GCA_050000025.2_rPodUni1.alt 2,436 2,426,844,641 0 0 48.44
636 yellow-spotted Amazon River turtle (primary hap 2025) Podocnemis unifilis GCA_050000005.1_rPodUni1.pri 39 1,849,762,660 114 443,085 34.17
637 yellow-spotted Amazon River turtle (primary hap 2026) Podocnemis unifilis GCA_050000005.2_rPodUni1.pri 87 2,435,981,808 214 56,909 48.54
638 yellowpond turtle (Southern MM-2020 2021) Mauremys mutica GCF_020497125.1_ASM2049712v1 595 2,484,367,879 1,041 93,474,084 33.86
639 zebra shark (6-17 2022 Squalomix) Stegostoma tigrinum GCF_022316705.1_sSteFas1.1 1,266 2,771,866,316 87,372 171,787,940 32.94
640 zebra shark (hap1 2023 refseq) Stegostoma tigrinum GCF_030684315.1_sSteTig4.hap1 835 3,198,515,386 1,159 17,106,481 64.64
641 zebra shark (hap2 2023) Stegostoma tigrinum GCA_030684295.1_sSteTig4.hap2 933 3,603,936,669 1,203 12,512,178 59.53
642 Zimmermann's poison frog (hap1 2025 genbank) Ranitomeya variabilis GCA_051348905.1_aRanVar5.hap1 287 5,645,607,495 209 38,800 70.06
643 Zimmermann's poison frog (hap1 2025 refseq) Ranitomeya variabilis GCF_051348905.1_aRanVar5.hap1 286 5,645,589,471 209 38,800 70.06
644 Zimmermann's poison frog (hap2 2025) Ranitomeya variabilis GCA_051348885.1_aRanVar5.hap2 275 5,710,906,444 227 41,700 70.26
TOTALS:total assembly count 644 7,457,950 2,155,671,654,707 72,653,948 13,851,870,117  

Additional hubs with collections of assemblies
Collection Hub index pages: Assembly statistics: Track statistics:
Primates 631 assemblies assembly stats track stats
Mammals 1014 assemblies assembly stats track stats
Birds 693 assemblies assembly stats track stats
Fishes 932 assemblies assembly stats track stats
other vertebrates 644 assemblies assembly stats track stats
Invertebrates 2029 assemblies assembly stats track stats
Plants 602 assemblies assembly stats track stats
Fungi 4138 assemblies assembly stats track stats
Viruses 15880 assemblies assembly stats track stats
Archaea 3178 assemblies assembly stats track stats
Bacteria 24177 assemblies assembly stats track stats
legacy/superseded 691 assemblies assembly stats track stats
collections below are subsets of the assemblies above
VGP - Vertebrate Genome Project 1303 assemblies assembly stats track stats
CCGP - The California Conservation Genomics Project 126 assemblies assembly stats track stats
HPRC - Human Pangenome Reference Consortium 464 assemblies assembly stats track stats
BRC - BRC Analytics - Bioinformatics Research Center 5522 assemblies assembly stats track stats