Chromosome 2 - Clone Overlaps - Single Contig
Description of this page
Main Reports Page
Main Assembly Page
Main Overlap Page
Whole Chromosome
Single Contigs
Line color code:
White: overlap with immediately succeeding clone
Green: overlap with clone in same contig
Pink: overlap with clone in same chromosome, different contig
Red: overlap with clone on different chromosome
Yellow: overlap with clone not used in assembly
NT_033005
NT_022221
NT_022139
NT_022270
NT_022194
NT_022327
NT_005334
NT_033008
NT_033000
NT_005214
NT_033002
NT_022227
NT_015926
NT_005204
NT_030589
NT_005367
NT_015120
NT_026239
NT_005389
NT_005399
NT_005375
NT_032985
NT_032982
NT_032996
NT_033007
NT_033006
NT_032984
NT_032999
NT_022354
NT_033004
NT_022184
NT_005322
NT_022143
NT_015805
NT_033003
NT_032992
NT_029235
NT_032994
NT_022300
NT_026970
NT_032987
NT_022171
NT_032997
NT_005429
NT_005224
NT_029895
NT_022240
NT_031762
NT_032990
NT_019306
NT_026982
NT_030595
NT_022222
NT_029927
NT_005079
NT_022135
NT_032991
NT_022140
NT_029911
NT_028068
NT_030590
NT_005058
NT_029926
NT_005129
NT_022172
NT_005273
NT_005435
NT_005151
NT_031761
NT_022154
NT_005343
NT_005332
NT_025652
NT_032998
NT_005265
NT_005031
NT_022339
NT_030600
NT_022197
NT_005483
NT_005062
NT_022155
NT_032995
NT_005190
NT_030603
NT_005417
NT_028103
NT_033001
NT_005037
NT_005229
NT_005370
NT_005034
NT_005078
NT_005486
NT_031748
NT_005337
NT_005403
NT_032986
NT_022115
NT_005414
NT_022315
NT_005120
NT_022173
NT_022388
NT_005416
NT_005472
NT_022250
NT_032981
NT_026250
NT_005078
Links
Contig1
Acc1
Start1
Phs
Chr2
Contig2
Acc2
Start2
Phs
Strong Overlap
Medium Overlap
Weak Overlap
Total Overlap
S
/
G
/
Y
/
R
/
B
/
O
NT_005078
AC093823
215796778
3
chr2
NT_005078
AC092840
215952483
3
0
1997
0
1997
S
/
G
/
Y
/
R
/
B
/
O
NT_005078
AC093823
215796778
3
 
 
AC069057
215467666
1
34581
1773
0
36354
S
/
G
/
Y
/
R
/
B
/
O
NT_005078
AC092840
215952483
3
chr2
NT_005078
AC096547
216083525
3
0
1996
0
1996
S
/
G
/
Y
/
R
/
B
/
O
NT_005078
AC092840
215952483
3
 
 
AC069057
215952483
1
119433
8441
0
127874
S
/
G
/
Y
/
R
/
B
/
O
NT_005078
AC096547
216083525
3
chr2
NT_005078
AC108216
216210675
3
2000
0
0
2000
S
/
G
/
Y
/
R
/
B
/
O
NT_005078
AC108216
216210675
3
chr2
NT_005078
AC092680
216243018
3
2000
0
0
2000
S
/
G
/
Y
/
R
/
B
/
O
NT_005078
AC092680
216243018
3
chr2
NT_005078
AC079119
216441046
3
2000
0
0
2000
S
/
G
/
Y
/
R
/
B
/
O
NT_005078
AC079119
216441046
3
chr2
NT_005078
AC096765
216443664
3
2000
0
0
2000
S
/
G
/
Y
/
R
/
B
/
O
NT_005078
AC096765
216443664
3
chr2
NT_005078
AC093865
216573355
3
2000
0
0
2000
S
/
G
/
Y
/
R
/
B
/
O
NT_005078
AC093865
216573355
3
chr2
NT_005078
AC093381
216757573
3
0
1987
0
1987
S
/
G
/
Y
/
R
/
B
/
O
NT_005078
AC093381
216757573
3
chr2
NT_005078
AC108066
216877350
3
2000
0
0
2000
S
/
G
/
Y
/
R
/
B
/
O
NT_005078
AC108066
216877350
3
chr2
NT_005078
AC013736
217033949
3
2000
0
0
2000
S
/
G
/
Y
/
R
/
B
/
O
NT_005078
AC013736
217033949
3
chr2
NT_005078
AC079610
217125527
3
2000
0
0
2000
S
/
G
/
Y
/
R
/
B
/
O
NT_005078
AC079610
217125527
3
chr2
NT_005078
AC024246
217284558
3
0
1999
0
1999
S
/
G
/
Y
/
R
/
B
/
O
NT_005078
AC024246
217284558
3
chr2
NT_005078
AC096565
217374878
3
0
1998
0
1998
S
/
G
/
Y
/
R
/
B
/
O
NT_005078
AC096565
217374878
3
chr2
NT_005078
AC114499
217545394
3
2000
0
0
2000
S
/
G
/
Y
/
R
/
B
/
O
NT_005078
AC096565
217374878
3
 
 
AC009290
217374878
1
124052
0
0
124052
S
/
G
/
Y
/
R
/
B
/
O
NT_005078
AC114499
217545394
3
chr2
NT_005078
AC064841
217575120
3
0
0
0
0
S
/
G
/
Y
/
R
/
B
/
O
NT_005078
AC114499
217545394
3
 
 
AC009290
217545394
1
31549
0
0
31549
S
/
G
/
Y
/
R
/
B
/
O
NT_005078
AC064841
217575120
3
chr2
NT_005078
AC093042
217642949
3
2000
0
0
2000
S
/
G
/
Y
/
R
/
B
/
O
NT_005078
AC064841
217575120
3
 
 
AC009290
217374878
1
18494
0
4010
22504
S
/
G
/
Y
/
R
/
B
/
O
NT_005078
AC093042
217642949
3
chr2
NT_005078
AC009964
217698440
3
2000
0
0
2000
S
/
G
/
Y
/
R
/
B
/
O
NT_005078
AC009964
217698440
3
chr2
NT_005078
AC092618
217893527
3
2000
0
0
2000
S
/
G
/
Y
/
R
/
B
/
O
NT_005078
AC009964
217698440
3
 
 
AC034261
217575120
1
152744
0
1408
154152
S
/
G
/
Y
/
R
/
B
/
O
NT_005078
AC092618
217893527
3
chr2
NT_005078
AC008169
217989587
3
2000
0
0
2000
S
/
G
/
Y
/
R
/
B
/
O
NT_005078
AC008169
217989587
3
chr2
NT_005078
AC008279
218160788
3
0
0
200
200
S
/
G
/
Y
/
R
/
B
/
O
NT_005078
AC008279
218160788
3
chr2
NT_005078
AC098486
218317846
3
2000
0
0
2000
S
/
G
/
Y
/
R
/
B
/
O
NT_005078
AC098486
218317846
3