Chromosome 2 - Clone Overlaps - Single Contig

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Chromosome 2 - Clone Overlaps - Single Contig

Description of this page

Main Reports Page

Main Assembly Page

Main Overlap Page

Whole Chromosome

Line color code:

White: overlap with immediately succeeding clone
Green: overlap with clone in same contig
Pink: overlap with clone in same chromosome, different contig
Red: overlap with clone on different chromosome
Yellow: overlap with clone not used in assembly

NT_033005	NT_022221	NT_022139	NT_022270	NT_022194	NT_022327	NT_005334	NT_033008
NT_033000	NT_005214	NT_033002	NT_022227	NT_015926	NT_005204	NT_030589	NT_005367
NT_015120	NT_026239	NT_005389	NT_005399	NT_005375	NT_032985	NT_032982	NT_032996
NT_033007	NT_033006	NT_032984	NT_032999	NT_022354	NT_033004	NT_022184	NT_005322
NT_022143	NT_015805	NT_033003	NT_032992	NT_029235	NT_032994	NT_022300	NT_026970
NT_032987	NT_022171	NT_032997	NT_005429	NT_005224	NT_029895	NT_022240	NT_031762
NT_032990	NT_019306	NT_026982	NT_030595	NT_022222	NT_029927	NT_005079	NT_022135
NT_032991	NT_022140	NT_029911	NT_028068	NT_030590	NT_005058	NT_029926	NT_005129
NT_022172	NT_005273	NT_005435	NT_005151	NT_031761	NT_022154	NT_005343	NT_005332
NT_025652	NT_032998	NT_005265	NT_005031	NT_022339	NT_030600	NT_022197	NT_005483
NT_005062	NT_022155	NT_032995	NT_005190	NT_030603	NT_005417	NT_028103	NT_033001
NT_005037	NT_005229	NT_005370	NT_005034	NT_005078	NT_005486	NT_031748	NT_005337
NT_005403	NT_032986	NT_022115	NT_005414	NT_022315	NT_005120	NT_022173	NT_022388
NT_005416	NT_005472	NT_022250	NT_032981	NT_026250

Links	Contig1	Acc1	Start1	Phs	Chr2	Contig2	Acc2	Start2	Phs	Strong Overlap	Medium Overlap	Weak Overlap	Total Overlap
S/G/Y/R/B/O	NT_022339	AC068833	192303397	1	chr2	NT_022339	AC104788	192306565	3	115171	4594	0	119765
S/G/Y/R/B/O	NT_022339	AC068833	192303397	1	chr2	NT_022339	AC013439	192429588	1	30330	0	0	30330
S/G/Y/R/B/O	NT_022339	AC068833	192303397	1	chr2	NT_032995	AC110786	198436362	1	40649	3068	0	43717
S/G/Y/R/B/O	NT_022339	AC068833	192303397	1			AC068417	192429588	1	12458	0	0	12458
S/G/Y/R/B/O	NT_022339	AC104788	192306565	3	chr2	NT_022339	AC013439	192429588	1	0	2000	0	2000
S/G/Y/R/B/O	NT_022339	AC104788	192306565	3	chr2	NT_032995	AC110786	198436362	1	36883	0	0	36883
S/G/Y/R/B/O	NT_022339	AC104788	192306565	3			AC068417	192429588	1	16969	0	0	16969
S/G/Y/R/B/O	NT_022339	AC013439	192429588	1	chr2	NT_022339	AC012488	192595479	3	0	0	200	200
S/G/Y/R/B/O	NT_022339	AC013439	192429588	1	chr2	NT_022339	AC068833	192303397	1	30330	0	0	30330
S/G/Y/R/B/O	NT_022339	AC012488	192595479	3	chr2	NT_022339	AC013468	192699368	3	0	0	200	200
S/G/Y/R/B/O	NT_022339	AC013468	192699368	3