Chromosome 2 - Clone Overlaps - Single Contig
Description of this page
Main Reports Page
Main Assembly Page
Main Overlap Page
Whole Chromosome
Single Contigs
Line color code:
White: overlap with immediately succeeding clone
Green: overlap with clone in same contig
Pink: overlap with clone in same chromosome, different contig
Red: overlap with clone on different chromosome
Yellow: overlap with clone not used in assembly
NT_033005
NT_022221
NT_022139
NT_022270
NT_022194
NT_022327
NT_005334
NT_033008
NT_033000
NT_005214
NT_033002
NT_022227
NT_015926
NT_005204
NT_030589
NT_005367
NT_015120
NT_026239
NT_005389
NT_005399
NT_005375
NT_032985
NT_032982
NT_032996
NT_033007
NT_033006
NT_032984
NT_032999
NT_022354
NT_033004
NT_022184
NT_005322
NT_022143
NT_015805
NT_033003
NT_032992
NT_029235
NT_032994
NT_022300
NT_026970
NT_032987
NT_022171
NT_032997
NT_005429
NT_005224
NT_029895
NT_022240
NT_031762
NT_032990
NT_019306
NT_026982
NT_030595
NT_022222
NT_029927
NT_005079
NT_022135
NT_032991
NT_022140
NT_029911
NT_028068
NT_030590
NT_005058
NT_029926
NT_005129
NT_022172
NT_005273
NT_005435
NT_005151
NT_031761
NT_022154
NT_005343
NT_005332
NT_025652
NT_032998
NT_005265
NT_005031
NT_022339
NT_030600
NT_022197
NT_005483
NT_005062
NT_022155
NT_032995
NT_005190
NT_030603
NT_005417
NT_028103
NT_033001
NT_005037
NT_005229
NT_005370
NT_005034
NT_005078
NT_005486
NT_031748
NT_005337
NT_005403
NT_032986
NT_022115
NT_005414
NT_022315
NT_005120
NT_022173
NT_022388
NT_005416
NT_005472
NT_022250
NT_032981
NT_026250
NT_015926
Links
Contig1
Acc1
Start1
Phs
Chr2
Contig2
Acc2
Start2
Phs
Strong Overlap
Medium Overlap
Weak Overlap
Total Overlap
S
/
G
/
Y
/
R
/
B
/
O
NT_015926
AC009829
21749773
1
chr2
NT_015926
AC062006
21750994
1
11586
7639
0
19225
S
/
G
/
Y
/
R
/
B
/
O
NT_015926
AC009829
21749773
1
chr2
NT_015926
AC010745
21798563
3
57377
18044
9351
84772
S
/
G
/
Y
/
R
/
B
/
O
NT_015926
AC009829
21749773
1
chr2
NT_015926
AC010880
21988457
3
12217
6118
8699
27034
S
/
G
/
Y
/
R
/
B
/
O
NT_015926
AC062006
21750994
1
chr2
NT_015926
AC010745
21798563
3
120914
9313
4597
134824
S
/
G
/
Y
/
R
/
B
/
O
NT_015926
AC010745
21798563
3
chr2
NT_015926
AC010880
21988457
3
0
0
200
200
S
/
G
/
Y
/
R
/
B
/
O
NT_015926
AC010745
21798563
3
chr2
NT_015926
AC009829
21749773
1
57377
18044
9351
84772
S
/
G
/
Y
/
R
/
B
/
O
NT_015926
AC010880
21988457
3
chr2
NT_015926
AC104623
22103688
3
0
1997
0
1997
S
/
G
/
Y
/
R
/
B
/
O
NT_015926
AC010880
21988457
3
chr2
NT_015926
AC009829
21749773
1
12217
6118
8699
27034
S
/
G
/
Y
/
R
/
B
/
O
NT_015926
AC104623
22103688
3
chr2
NT_015926
AC008164
22204482
3
0
0
0
0
S
/
G
/
Y
/
R
/
B
/
O
NT_015926
AC008164
22204482
3
chr2
NT_015926
AC008069
22354312
3
0
0
0
0
S
/
G
/
Y
/
R
/
B
/
O
NT_015926
AC008164
22204482
3
 
 
AC073158
21988457
1
38327
9676
16960
64963
S
/
G
/
Y
/
R
/
B
/
O
NT_015926
AC008069
22354312
3
chr2
NT_015926
AC080094
22542114
3
0
0
200
200
S
/
G
/
Y
/
R
/
B
/
O
NT_015926
AC008069
22354312
3
 
 
AC073158
21988457
1
11259
9449
5667
26375
S
/
G
/
Y
/
R
/
B
/
O
NT_015926
AC080094
22542114
3
chr2
NT_015926
AC064855
22675915
3
2000
0
0
2000
S
/
G
/
Y
/
R
/
B
/
O
NT_015926
AC064855
22675915
3
chr2
NT_015926
AC096556
22685133
3
2000
0
0
2000
S
/
G
/
Y
/
R
/
B
/
O
NT_015926
AC096556
22685133
3
chr2
NT_015926
AC068614
22766507
3
0
1999
0
1999
S
/
G
/
Y
/
R
/
B
/
O
NT_015926
AC068614
22766507
3
chr2
NT_015926
AC092843
22929213
3
2000
0
0
2000
S
/
G
/
Y
/
R
/
B
/
O
NT_015926
AC092843
22929213
3
chr2
NT_015926
AC104812
23010625
1
40681
0
0
40681
S
/
G
/
Y
/
R
/
B
/
O
NT_015926
AC092843
22929213
3
chr2
NT_015926
AC068520
23096715
1
31935
4359
2756
39050
S
/
G
/
Y
/
R
/
B
/
O
NT_015926
AC104812
23010625
1
chr2
NT_015926
AC068520
23096715
1
144315
12877
5541
162733
S
/
G
/
Y
/
R
/
B
/
O
NT_015926
AC104812
23010625
1
chr2
NT_015926
AC068487
23100965
1
106595
11535
18400
136530
S
/
G
/
Y
/
R
/
B
/
O
NT_015926
AC104812
23010625
1
chr2
NT_015926
AC079839
23134545
3
36755
0
0
36755
S
/
G
/
Y
/
R
/
B
/
O
NT_015926
AC068520
23096715
1
chr2
NT_015926
AC068487
23100965
1
35653
9550
3913
49116
S
/
G
/
Y
/
R
/
B
/
O
NT_015926
AC068520
23096715
1
chr2
NT_015926
AC079839
23134545
3
26525
0
2782
29307
S
/
G
/
Y
/
R
/
B
/
O
NT_015926
AC068520
23096715
1
chr2
NT_015926
AC092843
22929213
3
31935
4359
2756
39050
S
/
G
/
Y
/
R
/
B
/
O
NT_015926
AC068487
23100965
1
chr2
NT_015926
AC079839
23134545
3
51533
7043
5305
63881
S
/
G
/
Y
/
R
/
B
/
O
NT_015926
AC068487
23100965
1
chr2
NT_015926
AC104812
23010625
1
106595
11535
18400
136530
S
/
G
/
Y
/
R
/
B
/
O
NT_015926
AC079839
23134545
3
chr2
NT_015926
AC097377
23204855
3
0
1997
0
1997
S
/
G
/
Y
/
R
/
B
/
O
NT_015926
AC079839
23134545
3
chr2
NT_015926
AC068520
23096715
1
26525
0
2782
29307
S
/
G
/
Y
/
R
/
B
/
O
NT_015926
AC079839
23134545
3
chr2
NT_015926
AC104812
23010625
1
36755
0
0
36755
S
/
G
/
Y
/
R
/
B
/
O
NT_015926
AC097377
23204855
3
chr2
NT_015926
AC093731
23361778
3
0
1999
0
1999
S
/
G
/
Y
/
R
/
B
/
O
NT_015926
AC093731
23361778
3
chr2
NT_015926
AC090499
23550464
1
89756
0
0
89756
S
/
G
/
Y
/
R
/
B
/
O
NT_015926
AC090499
23550464
1
chr2
NT_015926
AC093624
23551117
1
0
3161
9411
12572
S
/
G
/
Y
/
R
/
B
/
O
NT_015926
AC093624
23551117
1
chr2
NT_015926
AC079802
23728977
3
159811
0
0
159811
S
/
G
/
Y
/
R
/
B
/
O
NT_015926
AC079802
23728977
3
chr2
NT_015926
AC104786
23747594
1
7473
0
0
7473
S
/
G
/
Y
/
R
/
B
/
O
NT_015926
AC104786
23747594
1
chr2
NT_015926
AC018948
23851058
1
151575
0
0
151575
S
/
G
/
Y
/
R
/
B
/
O
NT_015926
AC018948
23851058
1
chr2
NT_015926
AC114769
23907551
3
2000
0
0
2000
S
/
G
/
Y
/
R
/
B
/
O
NT_015926
AC114769
23907551
3
chr2
NT_015926
AC097531
23954065
3
2000
0
0
2000
S
/
G
/
Y
/
R
/
B
/
O
NT_015926
AC097531
23954065
3
chr2
NT_015926
AC079148
24055909
3
2000
0
0
2000
S
/
G
/
Y
/
R
/
B
/
O
NT_015926
AC079148
24055909
3
chr2
NT_015926
AC092586
24230598
3
0
0
0
0
S
/
G
/
Y
/
R
/
B
/
O
NT_015926
AC079148
24055909
3
 
 
AC016389
23907551
1
24465
2113
0
26578
S
/
G
/
Y
/
R
/
B
/
O
NT_015926
AC092586
24230598
3
chr2
NT_015926
AC106053
24359234
1
8756
0
0
8756
S
/
G
/
Y
/
R
/
B
/
O
NT_015926
AC092586
24230598
3
 
 
AC016389
23954065
1
119354
2292
7331
128977
S
/
G
/
Y
/
R
/
B
/
O
NT_015926
AC106053
24359234
1