Chromosome 2 - Clone Overlaps - Single Contig
Description of this page
Main Reports Page
Main Assembly Page
Main Overlap Page
Whole Chromosome
Single Contigs
Line color code:
White: overlap with immediately succeeding clone
Green: overlap with clone in same contig
Pink: overlap with clone in same chromosome, different contig
Red: overlap with clone on different chromosome
Yellow: overlap with clone not used in assembly
NT_033005
NT_022221
NT_022139
NT_022270
NT_022194
NT_022327
NT_005334
NT_033008
NT_033000
NT_005214
NT_033002
NT_022227
NT_015926
NT_005204
NT_030589
NT_005367
NT_015120
NT_026239
NT_005389
NT_005399
NT_005375
NT_032985
NT_032982
NT_032996
NT_033007
NT_033006
NT_032984
NT_032999
NT_022354
NT_033004
NT_022184
NT_005322
NT_022143
NT_015805
NT_033003
NT_032992
NT_029235
NT_032994
NT_022300
NT_026970
NT_032987
NT_022171
NT_032997
NT_005429
NT_005224
NT_029895
NT_022240
NT_031762
NT_032990
NT_019306
NT_026982
NT_030595
NT_022222
NT_029927
NT_005079
NT_022135
NT_032991
NT_022140
NT_029911
NT_028068
NT_030590
NT_005058
NT_029926
NT_005129
NT_022172
NT_005273
NT_005435
NT_005151
NT_031761
NT_022154
NT_005343
NT_005332
NT_025652
NT_032998
NT_005265
NT_005031
NT_022339
NT_030600
NT_022197
NT_005483
NT_005062
NT_022155
NT_032995
NT_005190
NT_030603
NT_005417
NT_028103
NT_033001
NT_005037
NT_005229
NT_005370
NT_005034
NT_005078
NT_005486
NT_031748
NT_005337
NT_005403
NT_032986
NT_022115
NT_005414
NT_022315
NT_005120
NT_022173
NT_022388
NT_005416
NT_005472
NT_022250
NT_032981
NT_026250
NT_022227
Links
Contig1
Acc1
Start1
Phs
Chr2
Contig2
Acc2
Start2
Phs
Strong Overlap
Medium Overlap
Weak Overlap
Total Overlap
S
/
G
/
Y
/
R
/
B
/
O
NT_022227
AC115619
19785103
3
chr2
NT_022227
AC010872
19828659
3
2000
0
0
2000
S
/
G
/
Y
/
R
/
B
/
O
NT_022227
AC010872
19828659
3
chr2
NT_022227
AC067959
20018166
3
0
0
200
200
S
/
G
/
Y
/
R
/
B
/
O
NT_022227
AC010872
19828659
3
 
 
M19828
19785103
3
11288
0
0
11288
S
/
G
/
Y
/
R
/
B
/
O
NT_022227
AC067959
20018166
3
chr2
NT_022227
AC096722
20076996
3
0
1996
0
1996
S
/
G
/
Y
/
R
/
B
/
O
NT_022227
AC096722
20076996
3
chr2
NT_022227
AC011752
20117192
3
0
1995
0
1995
S
/
G
/
Y
/
R
/
B
/
O
NT_022227
AC011752
20117192
3
chr2
NT_022227
AC009496
20238419
3
0
0
200
200
S
/
G
/
Y
/
R
/
B
/
O
NT_022227
AC009496
20238419
3
chr2
NT_022227
AC009411
20335062
3
0
0
200
200
S
/
G
/
Y
/
R
/
B
/
O
NT_022227
AC009411
20335062
3
chr2
NT_022227
AC018742
20505766
3
0
0
0
0
S
/
G
/
Y
/
R
/
B
/
O
NT_022227
AC009411
20335062
3
 
 
AC084349
20238419
1
46881
3536
1199
51616
S
/
G
/
Y
/
R
/
B
/
O
NT_022227
AC018742
20505766
3
chr2
NT_022227
AC068490
20679991
3
2000
0
0
2000
S
/
G
/
Y
/
R
/
B
/
O
NT_022227
AC018742
20505766
3
 
 
AC084349
20679991
1
84819
4233
6615
95667
S
/
G
/
Y
/
R
/
B
/
O
NT_022227
AC068490
20679991
3
chr2
NT_022227
AC093812
20834891
3
0
1995
0
1995
S
/
G
/
Y
/
R
/
B
/
O
NT_022227
AC093812
20834891
3
chr2
NT_022227
AC068044
20857935
3
0
1981
0
1981
S
/
G
/
Y
/
R
/
B
/
O
NT_022227
AC068044
20857935
3
chr2
NT_022227
AC116176
21038362
1
103193
0
0
103193
S
/
G
/
Y
/
R
/
B
/
O
NT_022227
AC116176
21038362
1
chr2
NT_022227
AC099799
21075475
3
57294
0
0
57294
S
/
G
/
Y
/
R
/
B
/
O
NT_022227
AC099799
21075475
3
chr2
NT_022227
AC096570
21160907
3
2000
0
0
2000
S
/
G
/
Y
/
R
/
B
/
O
NT_022227
AC096570
21160907
3
chr2
NT_022227
AC096561
21366879
3
0
1999
0
1999
S
/
G
/
Y
/
R
/
B
/
O
NT_022227
AC096561
21366879
3
chr2
NT_022227
AC074233
21535183
3
2000
0
0
2000
S
/
G
/
Y
/
R
/
B
/
O
NT_022227
AC074233
21535183
3
chr2
NT_022227
AC110300
21591809
3
2000
0
0
2000
S
/
G
/
Y
/
R
/
B
/
O
NT_022227
AC074233
21535183
3
chr2
NT_022227
AC104080
21683704
1
23524
11351
6880
41755
S
/
G
/
Y
/
R
/
B
/
O
NT_022227
AC110300
21591809
3
chr2
NT_022227
AC104080
21683704
1
23647
24446
21856
69949
S
/
G
/
Y
/
R
/
B
/
O
NT_022227
AC104080
21683704
1
 
 
 
 
 
 
 
 
 
S
/
G
/
Y
/
R
/
B
/
O
NT_022227
AC104080
21683704
1
chr2
NT_022227
AC074233
21535183
3
23524
11351
6880
41755