Chromosome 2 - Clone Overlaps - Single Contig
Description of this page
Main Reports Page
Main Assembly Page
Main Overlap Page
Whole Chromosome
Single Contigs
Line color code:
White: overlap with immediately succeeding clone
Green: overlap with clone in same contig
Pink: overlap with clone in same chromosome, different contig
Red: overlap with clone on different chromosome
Yellow: overlap with clone not used in assembly
NT_033005
NT_022221
NT_022139
NT_022270
NT_022194
NT_022327
NT_005334
NT_033008
NT_033000
NT_005214
NT_033002
NT_022227
NT_015926
NT_005204
NT_030589
NT_005367
NT_015120
NT_026239
NT_005389
NT_005399
NT_005375
NT_032985
NT_032982
NT_032996
NT_033007
NT_033006
NT_032984
NT_032999
NT_022354
NT_033004
NT_022184
NT_005322
NT_022143
NT_015805
NT_033003
NT_032992
NT_029235
NT_032994
NT_022300
NT_026970
NT_032987
NT_022171
NT_032997
NT_005429
NT_005224
NT_029895
NT_022240
NT_031762
NT_032990
NT_019306
NT_026982
NT_030595
NT_022222
NT_029927
NT_005079
NT_022135
NT_032991
NT_022140
NT_029911
NT_028068
NT_030590
NT_005058
NT_029926
NT_005129
NT_022172
NT_005273
NT_005435
NT_005151
NT_031761
NT_022154
NT_005343
NT_005332
NT_025652
NT_032998
NT_005265
NT_005031
NT_022339
NT_030600
NT_022197
NT_005483
NT_005062
NT_022155
NT_032995
NT_005190
NT_030603
NT_005417
NT_028103
NT_033001
NT_005037
NT_005229
NT_005370
NT_005034
NT_005078
NT_005486
NT_031748
NT_005337
NT_005403
NT_032986
NT_022115
NT_005414
NT_022315
NT_005120
NT_022173
NT_022388
NT_005416
NT_005472
NT_022250
NT_032981
NT_026250
NT_022155
Links
Contig1
Acc1
Start1
Phs
Chr2
Contig2
Acc2
Start2
Phs
Strong Overlap
Medium Overlap
Weak Overlap
Total Overlap
S
/
G
/
Y
/
R
/
B
/
O
NT_022155
AC023430
195361478
3
chr2
NT_022155
AC107483
195523318
3
2000
0
0
2000
S
/
G
/
Y
/
R
/
B
/
O
NT_022155
AC107483
195523318
3
chr2
NT_022155
AC062039
195525312
3
2000
0
0
2000
S
/
G
/
Y
/
R
/
B
/
O
NT_022155
AC062039
195525312
3
chr2
NT_022155
AC013401
195664352
3
0
1999
0
1999
S
/
G
/
Y
/
R
/
B
/
O
NT_022155
AC013401
195664352
3
chr2
NT_022155
AC093327
195830947
3
2000
0
0
2000
S
/
G
/
Y
/
R
/
B
/
O
NT_022155
AC093327
195830947
3
chr2
NT_022155
AC053523
195836145
3
2000
0
0
2000
S
/
G
/
Y
/
R
/
B
/
O
NT_022155
AC053523
195836145
3
chr2
NT_022155
AC109358
196006550
3
2000
0
0
2000
S
/
G
/
Y
/
R
/
B
/
O
NT_022155
AC053523
195836145
3
 
 
AC016496
195836145
1
164503
0
3809
168312
S
/
G
/
Y
/
R
/
B
/
O
NT_022155
AC109358
196006550
3
chr2
NT_022155
AC096647
196053703
3
0
2000
0
2000
S
/
G
/
Y
/
R
/
B
/
O
NT_022155
AC096647
196053703
3
chr2
NT_022155
AC078976
196198638
3
2000
0
0
2000
S
/
G
/
Y
/
R
/
B
/
O
NT_022155
AC078976
196198638
3
chr2
NT_022155
AC092638
196218872
3
2000
0
0
2000
S
/
G
/
Y
/
R
/
B
/
O
NT_022155
AC092638
196218872
3
chr2
NT_022155
AC083897
196384813
3
0
1998
0
1998
S
/
G
/
Y
/
R
/
B
/
O
NT_022155
AC083897
196384813
3
chr2
NT_022155
AC013475
196408119
3
0
0
200
200
S
/
G
/
Y
/
R
/
B
/
O
NT_022155
AC013475
196408119
3
chr2
NT_022155
AC083950
196601882
3
0
1998
0
1998
S
/
G
/
Y
/
R
/
B
/
O
NT_022155
AC083950
196601882
3
chr2
NT_022155
AC104079
196715389
3
2000
0
0
2000
S
/
G
/
Y
/
R
/
B
/
O
NT_022155
AC104079
196715389
3
chr2
NT_022155
AC074290
196724761
3
2000
0
0
2000
S
/
G
/
Y
/
R
/
B
/
O
NT_022155
AC074290
196724761
3
chr2
NT_022155
AC107217
196895467
3
2000
0
0
2000
S
/
G
/
Y
/
R
/
B
/
O
NT_022155
AC107217
196895467
3
chr2
NT_022155
AC068135
196910830
3
0
1989
0
1989
S
/
G
/
Y
/
R
/
B
/
O
NT_022155
AC068135
196910830
3
chr2
NT_022155
AC093389
197073564
3
2000
0
0
2000
S
/
G
/
Y
/
R
/
B
/
O
NT_022155
AC093389
197073564
3
chr2
NT_022155
AC068129
197094837
3
2000
0
0
2000
S
/
G
/
Y
/
R
/
B
/
O
NT_022155
AC068129
197094837
3
chr2
NT_022155
AC108068
197243483
3
2000
0
0
2000
S
/
G
/
Y
/
R
/
B
/
O
NT_022155
AC108068
197243483
3
chr2
NT_022155
AC018799
197321150
3
2000
0
0
2000
S
/
G
/
Y
/
R
/
B
/
O
NT_022155
AC018799
197321150
3
chr2
NT_022155
AC106883
197470257
1
48314
0
0
48314
S
/
G
/
Y
/
R
/
B
/
O
NT_022155
AC106883
197470257
1
chr2
NT_022155
AC073973
197489197
3
143780
0
0
143780
S
/
G
/
Y
/
R
/
B
/
O
NT_022155
AC073973
197489197
3
chr2
NT_022155
AC013456
197637632
3
0
1999
0
1999
S
/
G
/
Y
/
R
/
B
/
O
NT_022155
AC013456
197637632
3
chr2
NT_022155
AC006196
197678315
3
0
1997
0
1997
S
/
G
/
Y
/
R
/
B
/
O
NT_022155
AC006196
197678315
3
chr2
NT_022155
AC019116
197858265
3
20868
0
0
20868
S
/
G
/
Y
/
R
/
B
/
O
NT_022155
AC019116
197858265
3
chr2
NT_022155
AC010983
197971646
3
2000
0
0
2000
S
/
G
/
Y
/
R
/
B
/
O
NT_022155
AC010983
197971646
3
chr2
NT_022155
AC093910
198159516
3
0
0
0
0
S
/
G
/
Y
/
R
/
B
/
O
NT_022155
AC010983
197971646
3
 
 
AC011583
197971646
2
148340
0
0
148340
S
/
G
/
Y
/
R
/
B
/
O
NT_022155
AC093910
198159516
3
chr2
NT_022155
AC024424
198257662
1
68800
8096
1917
78813
S
/
G
/
Y
/
R
/
B
/
O
NT_022155
AC093910
198159516
3
chr2
NT_005190
AC105291
198687394
1
98740
0
0
98740
S
/
G
/
Y
/
R
/
B
/
O
NT_022155
AC024424
198257662
1
 
 
 
 
 
 
 
 
 
S
/
G
/
Y
/
R
/
B
/
O
NT_022155
AC024424
198257662
1
chr2
NT_005190
AC073066
198693119
3
34493
12791
2102
49386
S
/
G
/
Y
/
R
/
B
/
O
NT_022155
AC024424
198257662
1
chr2
NT_005190
AC105291
198687394
1
138569
27290
3141
169000