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  Chromosome 8 - Summary - Single Contig
 
Description of this page Main Reports Page Main Assembly Page Main Summary Page Whole Chromosome Single Contigs

Cell color code:

ColorGenetic, YAC, RHBAC End PairsClone Overlaps
WhiteNo markers placedAll clone bridges in same contigBest overlap with succeeding clone or no overlaps
BlueMarker consistent with alignment of STS mapClone bridges two adjacent contigs 
GreenMarker slightly inconsistent with alignment of STS mapClone bridges close contigsOverlap with non-adjacent clone in same contig
PinkMarker inconsistent with STS map, same chromosomeMulitple clones bridge to distant contig, same chromosomeOverlap with clone on different contig, same chromosome
RedMarker inconsistent with STS map, different chromosomeMulitple clones bridge to contig on different chromosomeOverlap with clone on different chromosome
YellowMarker not placed on any accession in contig, but alignment with STS map indicates it is in contig Overlap with clone not used in assembly

NT_008060 NT_023779 NT_034888 NT_023744 NT_034889 NT_023736 NT_019483 NT_034992
NT_008010 NT_034890 NT_034891 NT_015280 NT_030737 NT_023704 NT_008205 NT_008300
NT_023666 NT_007988 NT_030743 NT_033197 NT_034923 NT_007995 NT_008251 NT_008045
NT_034911 NT_008176 NT_034910 NT_034921 NT_008216 NT_034892 NT_023678 NT_017431
NT_023806 NT_023679 NT_008201 NT_023727 NT_033189 NT_023795 NT_008014 NT_008101
NT_008050 NT_008231 NT_008183 NT_034893 NT_034894 NT_029343 NT_008218 NT_030735
NT_008166 NT_023676 NT_023821 NT_034895 NT_008209 NT_008055 NT_008186 NT_034896
NT_007972 NT_008292 NT_034897 NT_008117 NT_023717 NT_034898 NT_008007 NT_034899
NT_008059 NT_008046 NT_034900 NT_008048 NT_023811 NT_031821 NT_023663 NT_008157
NT_023726 NT_008023 NT_030744 NT_023709 NT_008150 NT_025796 NT_034912 NT_007994
NT_028251 NT_034973 NT_034970 NT_023662 NT_033193 NT_023838 NT_008104 NT_034901
NT_033185 NT_027068 NT_030032 NT_033192 NT_008127 NT_023684 NT_031818


  NT_028251
 
ContigAccStartPhsGenetic MapsYAC MapRH MapsBAC endsOverlap
NT_028251AC0226811348139593none none none 10 confirm
2 blue
 0 weak
NT_028251AC10746013506388431 blue
 2 blue
 1 blue
1 green
 14 confirm
 0 weak
NT_028251AC0193421351573293none none none 4 confirm
 0 weak
NT_028251AC0409141351754853none none 1 blue
3 green
 15 confirm
 0 weak
NT_028251AC1043711353565523none none 2 green
 11 confirm
 0 weak
NT_028251AC10500813549835821 blue
 1 blue
 none 8 confirm
 0 weak
NT_028251AC1049521355125332none 2 blue
 none 17 confirm
 0 weak
NT_028251AC1039551356591673none none none 12 confirm
 0 weak
NT_028251AC07909813579188532 blue
 3 blue
 2 blue
1 pink
 14 confirm
 0 weak
NT_028251AC02378113604191531 blue
 1 blue
 none 17 confirm
 0 weak
NT_028251AC0250561360543193none none none 20 confirm
 0 weak
NT_028251AC01354613624129921 blue
 1 blue
 none 14 confirm
 0 weak
NT_028251AC01241013634240033 blue
 4 blue
 2 blue
3 pink
 27 confirm
 0 weak
NT_028251AC0216211365087313none 2 blue
 none 25 confirm
 0 weak
NT_028251AC0262611366817002none none none 13 confirm
 0 weak
NT_028251AC09332813691950831 blue
 1 blue
 none 13 confirm
 0 weak
NT_028251AC0935661369413383none none none 22 confirm
 0 weak
NT_028251AC0911601371108981none 1 blue
 2 blue
 25 confirm
 0 weak
NT_028251AC1052131372848532none none none 13 confirm
 0 weak
NT_028251AC1079041374156163none none none 18 confirm
 0 weak
NT_028251AC0461951375837073none none none 34 confirm
1 green
 0 weak
NT_028251AC0790151377452133none none none 22 confirm
1 blue
8 green
 0 weak
NT_028251-  1 yellow
 1 yellow
 1 yellow