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  Chromosome 4 - Clone Overlaps - Single Contig
 
Description of this page Main Reports Page Main Assembly Page Main Overlap Page Whole Chromosome Single Contigs

Line color code:

  • White: overlap with immediately succeeding clone
  • Green: overlap with clone in same contig
  • Pink: overlap with clone in same chromosome, different contig
  • Red: overlap with clone on different chromosome
  • Yellow: overlap with clone not used in assembly

NT_026996 NT_006111 NT_022865 NT_006081 NT_033075 NT_029956 NT_006051 NT_033060
NT_033064 NT_006362 NT_006307 NT_006342 NT_029958 NT_016407 NT_033056 NT_030649
NT_006344 NT_023072 NT_033076 NT_006350 NT_006285 NT_006316 NT_023052 NT_006189
NT_022794 NT_006305 NT_022751 NT_022995 NT_033067 NT_006098 NT_029274 NT_033069
NT_016297 NT_022782 NT_033059 NT_006238 NT_022831 NT_022853 NT_022850 NT_022778
NT_022852 NT_033063 NT_022813 NT_022836 NT_022862 NT_006303 NT_030640 NT_033073
NT_006281 NT_006216 NT_033072 NT_022760 NT_006109 NT_006328 NT_022844 NT_030642
NT_006114 NT_030659 NT_006204 NT_033074 NT_023068 NT_006201 NT_006383 NT_006397
NT_033061 NT_033068 NT_006365 NT_028147 NT_028173 NT_006371 NT_025694 NT_031780
NT_016599 NT_031781 NT_016354 NT_033055 NT_033062 NT_033065 NT_006167 NT_006302
NT_022755 NT_022753 NT_022803 NT_022846 NT_022856 NT_022805 NT_022819 NT_022845
NT_006124 NT_022811 NT_006127 NT_006258 NT_016606 NT_029950 NT_028160 NT_029954
NT_022851 NT_022832 NT_015169 NT_006129 NT_022740 NT_029955 NT_022801 NT_022824
NT_006171 NT_022776 NT_022768 NT_006198 NT_006257 NT_022775 NT_006118 NT_022792
NT_006256 NT_006169 NT_022841 NT_033070 NT_022800 NT_033066 NT_033071 NT_028146
NT_029961 NT_025688


  NT_006204
 
LinksContig1Acc1Start1PhsChr2Contig2Acc2Start2PhsStrong OverlapMedium OverlapWeak OverlapTotal Overlap
S/G/Y/R/B/O NT_006204AC021566890510641chr4NT_006204AC10482789053007314512300145123
S/G/Y/R/B/O NT_006204AC021566890510641chr4NT_006204AC096953892102693134710013471
S/G/Y/R/B/O NT_006204AC104827890530073chr4NT_006204AC0969538921026930000
S/G/Y/R/B/O NT_006204AC096953892102693chr4NT_006204AC1100768939242132000002000
S/G/Y/R/B/O NT_006204AC096953892102693chr4NT_006204AC021566890510641134710013471
S/G/Y/R/B/O NT_006204AC096953892102693  AC01165889051064115994740121119165078
S/G/Y/R/B/O NT_006204AC110076893924213chr4NT_006204AC0976578949363230000
S/G/Y/R/B/O NT_006204AC110076893924213  AC109819892102691694650408273547
S/G/Y/R/B/O NT_006204AC097657894936323chr4NT_006204AC1054138965356632000002000
S/G/Y/R/B/O NT_006204AC097657894936323  AC109819896535661798140079814
S/G/Y/R/B/O NT_006204AC105413896535663chr4NT_006204AC0792378971752432000002000
S/G/Y/R/B/O NT_006204AC079237897175243chr4NT_006204AC0938278973914230199801998
S/G/Y/R/B/O NT_006204AC093827897391423chr4NT_006204AC0937798992940532000002000
S/G/Y/R/B/O NT_006204AC093779899294053chr4NT_006204AC0926588998706830199401994
S/G/Y/R/B/O NT_006204AC093779899294053  AJ238093897391423527330052733
S/G/Y/R/B/O NT_006204AC092658899870683chr4NT_006204AC108516901160011285220028522
S/G/Y/R/B/O NT_006204AC108516901160011chr4NT_006204AC1122509029128013666601129247958
S/G/Y/R/B/O NT_006204AC112250902912801chr4NT_006204AC093906903789193667560339570151
S/G/Y/R/B/O NT_006204AC093906903789193chr4NT_006204AC093895905682053774290077429
S/G/Y/R/B/O NT_006204AC093895905682053chr4NT_006204AC1084959066153430199901999
S/G/Y/R/B/O NT_006204AC093895905682053  AC090084126069091390622317041379
S/G/Y/R/B/O NT_006204AC108495906615343chr4NT_006204AC0937689066439030000
S/G/Y/R/B/O NT_006204AC093768906643903chr4NT_006204AC087106908500141104740010474
S/G/Y/R/B/O NT_006204AC093768906643903  AC090084908500141353880035388
S/G/Y/R/B/O NT_006204AC087106908500141chr4NT_006204AC084732908905343967920096792
S/G/Y/R/B/O NT_006204AC087106908500141  D14813906643903108280010828
S/G/Y/R/B/O NT_006204AC084732908905343chr4NT_006204AC097484910721103858950085895
S/G/Y/R/B/O NT_006204AC097484910721103chr4NT_006204AC1070679115594330000
S/G/Y/R/B/O NT_006204AC107067911559433chr4NT_006204AC0838299126823432000002000
S/G/Y/R/B/O NT_006204AC083829912682343chr4NT_006204AC0985829145563632000002000
S/G/Y/R/B/O NT_006204AC083829912682343chr4NT_006204AC023521920063231668918059235677306
S/G/Y/R/B/O NT_006204AC098582914556363chr4NT_006204AP001966915571873530960053096
S/G/Y/R/B/O NT_006204AC098582914556363chr4NT_006204AC019279920031721346976299611447110
S/G/Y/R/B/O NT_006204AC098582914556363chr4NT_006204AC023521920063231514164007284658269
S/G/Y/R/B/O NT_006204AC098582914556363chr4NT_006204AC108065916321691427860042786
S/G/Y/R/B/O NT_006204AC098582914556363  AC093161912682341166742399186520938
S/G/Y/R/B/O NT_006204AP001966915571873chr4NT_006204AC108065916321691771240077124
S/G/Y/R/B/O NT_006204AP001966915571873chr4NT_006204AC01927992003172179474137567368100598
S/G/Y/R/B/O NT_006204AP001966915571873chr4NT_006204AC02352192006323140233246781543515
S/G/Y/R/B/O NT_006204AP001966915571873  AC09316192006323183143128474749100739
S/G/Y/R/B/O NT_006204AC108065916321691chr4NT_006204AC021183916655543413880041388
S/G/Y/R/B/O NT_006204AC108065916321691chr4NT_006204AC0192799200317216035211252125872862
S/G/Y/R/B/O NT_006204AC108065916321691chr4NT_006204AC02352192006323118655246781721939
S/G/Y/R/B/O NT_006204AC108065916321691chr4NT_006204AC098582914556363427860042786
S/G/Y/R/B/O NT_006204AC108065916321691  AC09316192006323192279103504524107153
S/G/Y/R/B/O NT_006204AC021183916655543chr4NT_006204AC0791419178439130199701997
S/G/Y/R/B/O NT_006204AC021183916655543  AC093161917843911308620202932891
S/G/Y/R/B/O NT_006204AC079141917843913chr4NT_006204AC104785919536641526740052674
S/G/Y/R/B/O NT_006204AC079141917843913chr4NT_006204AC055833920126291451193537048656
S/G/Y/R/B/O NT_006204AC104785919536641chr4NT_006204AC0192799200317210000
S/G/Y/R/B/O NT_006204AC104785919536641chr4NT_006204AC055833920126291103635717117766128572
S/G/Y/R/B/O NT_006204AC104785919536641chr4NT_006204AC105388920753843527490052749
S/G/Y/R/B/O NT_006204AC019279920031721chr4NT_006204AC023521920063231260034696109831797
S/G/Y/R/B/O NT_006204AC019279920031721chr4NT_006204AC098582914556363346976299611447110
S/G/Y/R/B/O NT_006204AC019279920031721chr4NT_006204AC1080659163216916035211252125872862
S/G/Y/R/B/O NT_006204AC019279920031721chr11NT_033899AP00092012616947331092518112496634003
S/G/Y/R/B/O NT_006204AC019279920031721chr4NT_006204AP00196691557187379474137567368100598
S/G/Y/R/B/O NT_006204AC019279920031721  AC0931619200632313828817182858564055
S/G/Y/R/B/O NT_006204AC023521920063231chr4NT_006204AC0558339201262910000
S/G/Y/R/B/O NT_006204AC023521920063231chr4NT_006204AC083829912682343668918059235677306
S/G/Y/R/B/O NT_006204AC023521920063231chr4NT_006204AC098582914556363514164007284658269
S/G/Y/R/B/O NT_006204AC023521920063231chr4NT_006204AC10806591632169118655246781721939
S/G/Y/R/B/O NT_006204AC023521920063231chr4NT_006204AP00196691557187340233246781543515
S/G/Y/R/B/O NT_006204AC055833920126291chr4NT_006204AC105388920753843475880313750725
S/G/Y/R/B/O NT_006204AC055833920126291chr4NT_006204AC079141917843913451193537048656
S/G/Y/R/B/O NT_006204AC055833920126291chr4NT_006204AC104785919536641103635717117766128572
S/G/Y/R/B/O NT_006204AC055833920126291  AP002082920753841175410292620467
S/G/Y/R/B/O NT_006204AC105388920753843chr4NT_006204AC0938629219604630000
S/G/Y/R/B/O NT_006204AC105388920753843chr4NT_006204AC104785919536641527490052749
S/G/Y/R/B/O NT_006204AC105388920753843  AP001940919536641752930828583578
S/G/Y/R/B/O NT_006204AC105388920753843  AP002082919536641677510067751
S/G/Y/R/B/O NT_006204AC093862921960463chr4NT_006204AC0938669236624132000002000
S/G/Y/R/B/O NT_006204AC093862921960463  AC055775948332531175402245019785
S/G/Y/R/B/O NT_006204AC093866923662413chr4NT_006204AC0974789252400530000
S/G/Y/R/B/O NT_006204AC093866923662413  AC05577594833253111413447880118922
S/G/Y/R/B/O NT_006204AC097478925240053chr4NT_006204AC1082089269148930000
S/G/Y/R/B/O NT_006204AC097478925240053  AC01195492196046112857921901655132424
S/G/Y/R/B/O NT_006204AC097478925240053  AF163864921960463645180064518
S/G/Y/R/B/O NT_006204AC097478925240053  AP00194792196046211214200112142
S/G/Y/R/B/O NT_006204AC108208926914893chr4NT_006204AC0937599270841130000
S/G/Y/R/B/O NT_006204AC108208926914893  AC011954921960461156140015614
S/G/Y/R/B/O NT_006204AC108208926914893  AF163864921960463188910018891
S/G/Y/R/B/O NT_006204AC108208926914893  AP001947921960462188950018895
S/G/Y/R/B/O NT_006204AC093759927084113chr4NT_006204AC1054459288421830000
S/G/Y/R/B/O NT_006204AC093759927084113  AC0155291837804114980400149804
S/G/Y/R/B/O NT_006204AC093759927084113  AF16386418378043658790065879
S/G/Y/R/B/O NT_006204AC093759927084113  AP00194718378042680840068084
S/G/Y/R/B/O NT_006204AC093759927084113  AP00201318378042341080034108
S/G/Y/R/B/O NT_006204AC105445928842183chr4NT_006204AC1080389301112532000002000
S/G/Y/R/B/O NT_006204AC105445928842183chr4NT_006204AP002083972549711824822196667591353
S/G/Y/R/B/O NT_006204AC105445928842183  AP0020139301112526199401529277286
S/G/Y/R/B/O NT_006204AC108038930111253chr4NT_006204AC0937819314997932000002000
S/G/Y/R/B/O NT_006204AC108038930111253chr4NT_006204AP002083972549711350991537348940125
S/G/Y/R/B/O NT_006204AC093781931499793chr4NT_006204AC0985939330403730000
S/G/Y/R/B/O NT_006204AC093781931499793  AC019352972549711471800047180
S/G/Y/R/B/O NT_006204AC093781931499793  AP0019419301112513773801602453762
S/G/Y/R/B/O NT_006204AC098593933040373chr4NT_006204AC0975249341097432000002000
S/G/Y/R/B/O NT_006204AC098593933040373  AC019352930111251917500119592945
S/G/Y/R/B/O NT_006204AC098593933040373  AC04101393011125155944622884263014
S/G/Y/R/B/O NT_006204AC098593933040373  AP001941934109741160771911017988
S/G/Y/R/B/O NT_006204AC097524934109743chr4NT_006204AC0937299352258732000002000
S/G/Y/R/B/O NT_006204AC097524934109743  AC041013934109741912050091205
S/G/Y/R/B/O NT_006204AC097524934109743  AP001948933040371232910023291
S/G/Y/R/B/O NT_006204AC093729935225873chr4NT_006204AC0191889366920332000002000
S/G/Y/R/B/O NT_006204AC093729935225873  AP00194893410974110276400102764
S/G/Y/R/B/O NT_006204AC019188936692033chr4NT_006204AC0937939387503832000002000
S/G/Y/R/B/O NT_006204AC093793938750383chr4NT_006204AC0040549397643030199801998
S/G/Y/R/B/O NT_006204AC004054939764303chr4NT_006204AC0968979408661530000
S/G/Y/R/B/O NT_006204AC004054939764303chr4NT_006204AC114787940976151504680050468
S/G/Y/R/B/O NT_006204AC096897940866153chr4NT_006204AC114787940976151129760012976
S/G/Y/R/B/O NT_006204AC114787940976151chr4NT_006204AC07412494241967310999500109995
S/G/Y/R/B/O NT_006204AC114787940976151chr4NT_006204AC004054939764303504680050468
S/G/Y/R/B/O NT_006204AC114787940976151  AP0019424597207816030303801798320
S/G/Y/R/B/O NT_006204AC074124942419673chr4NT_006204AC110796942976951668730066873
S/G/Y/R/B/O NT_006204AC074124942419673  AP0019429409761514239201703159423
S/G/Y/R/B/O NT_006204AC110796942976951chr4NT_006204AC07930194298359311508400115084
S/G/Y/R/B/O NT_006204AC110796942976951  AP001949942983591322470412836375
S/G/Y/R/B/O NT_006204AC079301942983593chr4NT_006204AC1107749445209530000
S/G/Y/R/B/O NT_006204AC079301942983593  AP0019499429769514245603310075556
S/G/Y/R/B/O NT_006204AC110774944520953chr4NT_006204AC107049945711111622610062261
S/G/Y/R/B/O NT_006204AC110774944520953  AC08760794297695149489388856753944
S/G/Y/R/B/O NT_006204AC110774944520953  AP001949945711111177440017744
S/G/Y/R/B/O NT_006204AC107049945711111chr4NT_006204AC0938109468381430000
S/G/Y/R/B/O NT_006204AC107049945711111  AC0876079457111111385029173567148242
S/G/Y/R/B/O NT_006204AC107049945711111  AP001943944520951238050023805
S/G/Y/R/B/O NT_006204AC093810946838143chr4NT_006204AC0938479483048532000002000
S/G/Y/R/B/O NT_006204AC093810946838143  AP001943948304851619210452166442
S/G/Y/R/B/O NT_006204AC093847948304853chr4NT_006204AC0935979500341132000002000
S/G/Y/R/B/O NT_006204AC093847948304853chr4NT_006204AC0341829722275814271110798562659135
S/G/Y/R/B/O NT_006204AC093597950034113chr4NT_006204AC0975209501862230000
S/G/Y/R/B/O NT_006204AC097520950186223chr4NT_006204AC1126959519010132000002000
S/G/Y/R/B/O NT_006204AC097520950186223chr4NT_006204AC034182972227581341940208236276
S/G/Y/R/B/O NT_006204AC112695951901013chr4NT_006204AC1155379529796132000002000
S/G/Y/R/B/O NT_006204AC115537952979613chr4NT_006204AC0935969534558710200002000
S/G/Y/R/B/O NT_006204AC093596953455871chr4NT_006204AC0223179549793430000
S/G/Y/R/B/O NT_006204AC093596953455871chr12NT_030814AC09274422444363154635112242204487903
S/G/Y/R/B/O NT_006204AC093596953455871  AC018575951901011975360097536
S/G/Y/R/B/O NT_006204AC093596953455871  AP001944952979611349650034965
S/G/Y/R/B/O NT_006204AC022317954979343chr4NT_006204AC0950599567165932000002000
S/G/Y/R/B/O NT_006204AC022317954979343chr12NT_030814AC092744224443631105050366614171
S/G/Y/R/B/O NT_006204AC022317954979343  AC018575952979611454420045442
S/G/Y/R/B/O NT_006204AC022317954979343  AP001944956716591563700056370
S/G/Y/R/B/O NT_006204AC095059956716593chr4NT_006204AC1081589577924532000002000
S/G/Y/R/B/O NT_006204AC108158957792453chr4NT_006204AC0206999578754732000002000
S/G/Y/R/B/O NT_006204AC020699957875473chr4NT_006204AC0967699597250832000002000
S/G/Y/R/B/O NT_006204AC096769959725083chr4NT_006204AC1151119604131432000002000
S/G/Y/R/B/O NT_006204AC115111960413143chr4NT_006204AC011660961405441001245012450
S/G/Y/R/B/O NT_006204AC011660961405441chr4NT_006204AC11080096173262311093300110933
S/G/Y/R/B/O NT_006204AC011660961405441chr4NT_006204AC105452962610843340370034037
S/G/Y/R/B/O NT_006204AC110800961732623chr4NT_006204AC1054529626108430000
S/G/Y/R/B/O NT_006204AC105452962610843chr4NT_006204AC1053159641571830000
S/G/Y/R/B/O NT_006204AC105452962610843chr4NT_006204AC011660961405441340370034037
S/G/Y/R/B/O NT_006204AC105452962610843  AP002084961405441318190031819
S/G/Y/R/B/O NT_006204AC105315964157183chr4NT_006204AC0937339643153430000
S/G/Y/R/B/O NT_006204AC105315964157183  AP002084961405441139740013974
S/G/Y/R/B/O NT_006204AC093733964315343chr4NT_006204AC1040779660504332000002000
S/G/Y/R/B/O NT_006204AC093733964315343  AP001864966050431173260017326
S/G/Y/R/B/O NT_006204AC093733964315343  AP002084966050431391340039134
S/G/Y/R/B/O NT_006204AC104077966050433chr4NT_006204AC0874139672515132000002000
S/G/Y/R/B/O NT_006204AC104077966050433  AP001864964315341971560097156
S/G/Y/R/B/O NT_006204AC087413967251513chr4NT_006204AC1046479680385232000002000
S/G/Y/R/B/O NT_006204AC104647968038523chr4NT_006204AC0986779689865130199701997
S/G/Y/R/B/O NT_006204AC104647968038523chr4NT_006204AC022249972300861748052500310680411
S/G/Y/R/B/O NT_006204AC098677968986513chr4NT_006204AC0967469706571430000
S/G/Y/R/B/O NT_006204AC098677968986513chr4NT_006204AC0222499723008616618502017386358
S/G/Y/R/B/O NT_006204AC098677968986513chr4NT_006204AC037468972493261754109560323288202
S/G/Y/R/B/O NT_006204AC096746970657143chr4NT_006204AC0341829722275810000
S/G/Y/R/B/O NT_006204AC096746970657143chr4NT_006204AC037468972493261747151826076541
S/G/Y/R/B/O NT_006204AC034182972227581chr4NT_006204AC0222499723008610000
S/G/Y/R/B/O NT_006204AC034182972227581chr4NT_006204AC0938479483048534271110798562659135
S/G/Y/R/B/O NT_006204AC034182972227581chr4NT_006204AC097520950186223341940208236276
S/G/Y/R/B/O NT_006204AC022249972300861chr4NT_006204AC0077159724351310000
S/G/Y/R/B/O NT_006204AC022249972300861chr4NT_006204AC037468972493261162530016253
S/G/Y/R/B/O NT_006204AC022249972300861chr4NT_006204AC0986779689865136618502017386358
S/G/Y/R/B/O NT_006204AC022249972300861chr4NT_006204AC104647968038523748052500310680411
S/G/Y/R/B/O NT_006204AC007715972435131chr4NT_006204AC0374689724932610000
S/G/Y/R/B/O NT_006204AC037468972493261chr4NT_006204AP0020839725497110000
S/G/Y/R/B/O NT_006204AC037468972493261chr4NT_006204AC022249972300861162530016253
S/G/Y/R/B/O NT_006204AC037468972493261chr4NT_006204AC096746970657143747151826076541
S/G/Y/R/B/O NT_006204AC037468972493261chr4NT_006204AC098677968986513754109560323288202
S/G/Y/R/B/O NT_006204AP002083972549711         
S/G/Y/R/B/O NT_006204AP002083972549711chr4NT_006204AC105445928842183824822196667591353
S/G/Y/R/B/O NT_006204AP002083972549711chr4NT_006204AC108038930111253350991537348940125
S/G/Y/R/B/O NT_006204AP002083972549711  AP002013930111252156912199687524765