Chromosome 4 - Clone Overlaps

Chromosome 4 - Clone Overlaps - Single Contig

Description of this page

Line color code:

White: overlap with immediately succeeding clone
Green: overlap with clone in same contig
Pink: overlap with clone in same chromosome, different contig
Red: overlap with clone on different chromosome
Yellow: overlap with clone not used in assembly

NT_026996	NT_006111	NT_022865	NT_006081	NT_033075	NT_029956	NT_006051	NT_033060
NT_033064	NT_006362	NT_006307	NT_006342	NT_029958	NT_016407	NT_033056	NT_030649
NT_006344	NT_023072	NT_033076	NT_006350	NT_006285	NT_006316	NT_023052	NT_006189
NT_022794	NT_006305	NT_022751	NT_022995	NT_033067	NT_006098	NT_029274	NT_033069
NT_016297	NT_022782	NT_033059	NT_006238	NT_022831	NT_022853	NT_022850	NT_022778
NT_022852	NT_033063	NT_022813	NT_022836	NT_022862	NT_006303	NT_030640	NT_033073
NT_006281	NT_006216	NT_033072	NT_022760	NT_006109	NT_006328	NT_022844	NT_030642
NT_006114	NT_030659	NT_006204	NT_033074	NT_023068	NT_006201	NT_006383	NT_006397
NT_033061	NT_033068	NT_006365	NT_028147	NT_028173	NT_006371	NT_025694	NT_031780
NT_016599	NT_031781	NT_016354	NT_033055	NT_033062	NT_033065	NT_006167	NT_006302
NT_022755	NT_022753	NT_022803	NT_022846	NT_022856	NT_022805	NT_022819	NT_022845
NT_006124	NT_022811	NT_006127	NT_006258	NT_016606	NT_029950	NT_028160	NT_029954
NT_022851	NT_022832	NT_015169	NT_006129	NT_022740	NT_029955	NT_022801	NT_022824
NT_006171	NT_022776	NT_022768	NT_006198	NT_006257	NT_022775	NT_006118	NT_022792
NT_006256	NT_006169	NT_022841	NT_033070	NT_022800	NT_033066	NT_033071	NT_028146
NT_029961	NT_025688

NT_006397

Links	Contig1	Acc1	Start1	Phs	Chr2	Contig2	Acc2	Start2	Phs	Strong Overlap	Medium Overlap	Weak Overlap	Total Overlap
S/G/Y/R/B/O	NT_006397	AC110089	102450098	1	chr4	NT_006397	AC097460	102502280	3	155741	0	0	155741
S/G/Y/R/B/O	NT_006397	AC110089	102450098	1			AP002737	102502280	1	33272	0	0	33272
S/G/Y/R/B/O	NT_006397	AC097460	102502280	3	chr4	NT_006397	AP001962	102659176	3	7474	0	0	7474
S/G/Y/R/B/O	NT_006397	AC097460	102502280	3			AP002737	102659176	1	33270	0	0	33270
S/G/Y/R/B/O	NT_006397	AP001962	102659176	3	chr4	NT_006397	AC108061	102771200	3	0	1992	0	1992
S/G/Y/R/B/O	NT_006397	AP001962	102659176	3			AP002737	102771200	1	66385	0	0	66385
S/G/Y/R/B/O	NT_006397	AC108061	102771200	3	chr4	NT_006397	AC084421	102792807	3	2000	0	0	2000
S/G/Y/R/B/O	NT_006397	AC084421	102792807	3	chr4	NT_006397	AC083902	102884781	3	0	0	0	0
S/G/Y/R/B/O	NT_006397	AC084421	102792807	3			AC024663	102659176	1	46677	0	0	46677
S/G/Y/R/B/O	NT_006397	AC084421	102792807	3			AP002012	102771200	3	22071	0	0	22071
S/G/Y/R/B/O	NT_006397	AC083902	102884781	3	chr4	NT_006397	AP001960	103034829	3	54773	0	0	54773
S/G/Y/R/B/O	NT_006397	AC083902	102884781	3			AC015614	102771200	2	30863	0	0	30863
S/G/Y/R/B/O	NT_006397	AC083902	102884781	3			AC024663	102771200	1	91673	10193	0	101866
S/G/Y/R/B/O	NT_006397	AC083902	102884781	3			AC027065	102771200	1	96616	0	1080	97696
S/G/Y/R/B/O	NT_006397	AC083902	102884781	3			AP002012	103034829	3	69933	0	0	69933
S/G/Y/R/B/O	NT_006397	AP001960	103034829	3	chr4	NT_006397	AC097530	103167722	3	7826	0	0	7826
S/G/Y/R/B/O	NT_006397	AP001960	103034829	3			AC015614	103034829	2	116635	0	0	116635
S/G/Y/R/B/O	NT_006397	AP001960	103034829	3			AC027065	103034829	1	62396	0	14566	76962
S/G/Y/R/B/O	NT_006397	AC097530	103167722	3	chr4	NT_006397	AP002026	103287590	3	0	1997	0	1997
S/G/Y/R/B/O	NT_006397	AC097530	103167722	3			AC015614	103167722	2	59137	0	0	59137
S/G/Y/R/B/O	NT_006397	AC097530	103167722	3			AP002027	103287590	3	118882	0	0	118882
S/G/Y/R/B/O	NT_006397	AP002026	103287590	3	chr4	NT_006397	AC019131	103432862	3	51080	0	0	51080
S/G/Y/R/B/O	NT_006397	AP002026	103287590	3			AP002028	103167722	3	18527	0	0	18527
S/G/Y/R/B/O	NT_006397	AC019131	103432862	3	chr4	NT_006397	AC093836	103639602	3	0	1998	0	1998
S/G/Y/R/B/O	NT_006397	AC019131	103432862	3			AP002028	103287590	3	138435	0	0	138435
S/G/Y/R/B/O	NT_006397	AC093836	103639602	3	chr4	NT_006397	AC073975	103749905	3	0	2000	0	2000
S/G/Y/R/B/O	NT_006397	AC073975	103749905	3	chr4	NT_006397	AC114811	103890469	1	138589	0	0	138589
S/G/Y/R/B/O	NT_006397	AC114811	103890469	1	chr4	NT_006397	AC093634	103891036	1	0	0	0	0
S/G/Y/R/B/O	NT_006397	AC093634	103891036	1	chr4	NT_006397	AP001867	103911394	3	48712	0	0	48712
S/G/Y/R/B/O	NT_006397	AC093634	103891036	1	chr4	NT_006397	AC004061	103971448	3	64126	1806	12767	78699
S/G/Y/R/B/O	NT_006397	AC093634	103891036	1			AC083952	103971448	1	38861	0	1902	40763
S/G/Y/R/B/O	NT_006397	AP001867	103911394	3	chr4	NT_006397	AC004061	103971448	3	0	0	0	0
S/G/Y/R/B/O	NT_006397	AC004061	103971448	3	chr4	NT_006397	AC092609	104088549	3	30699	0	0	30699
S/G/Y/R/B/O	NT_006397	AC004061	103971448	3	chr4	NT_006397	AC093634	103891036	1	64126	1806	12767	78699
S/G/Y/R/B/O	NT_006397	AC004061	103971448	3			AC083952	103891036	1	68024	0	34612	102636
S/G/Y/R/B/O	NT_006397	AC092609	104088549	3	chr4	NT_006397	AC105395	104208596	3	0	0	0	0
S/G/Y/R/B/O	NT_006397	AC092609	104088549	3			AC009920	103971448	1	23696	0	0	23696
S/G/Y/R/B/O	NT_006397	AC092609	104088549	3			AC011818	103971448	1	32919	0	1261	34180
S/G/Y/R/B/O	NT_006397	AC092609	104088549	3			AC083952	103971448	1	35623	0	50012	85635
S/G/Y/R/B/O	NT_006397	AC092609	104088549	3			AP001950	103971448	1	24019	0	105905	129924
S/G/Y/R/B/O	NT_006397	AC105395	104208596	3	chr4	NT_006397	AP001969	104368877	1	0	0	0	0
S/G/Y/R/B/O	NT_006397	AC105395	104208596	3	chr4	NT_006397	AC114747	104371824	1	11015	8756	17938	37709
S/G/Y/R/B/O	NT_006397	AC105395	104208596	3			AC009920	103971448	1	125839	2811	11313	139963
S/G/Y/R/B/O	NT_006397	AC105395	104208596	3			AC011818	103971448	1	137885	3071	0	140956
S/G/Y/R/B/O	NT_006397	AC105395	104208596	3			AP001950	104371824	1	63844	0	2562	66406
S/G/Y/R/B/O	NT_006397	AP001969	104368877	1	chr4	NT_006397	AC114747	104371824	1	10992	8339	16432	35763
S/G/Y/R/B/O	NT_006397	AP001969	104368877	1	chr4	NT_006397	AC022570	104372319	1	21213	0	2056	23269
S/G/Y/R/B/O	NT_006397	AP001969	104368877	1			AC009920	104371824	1	13174	5728	11302	30204
S/G/Y/R/B/O	NT_006397	AP001969	104368877	1			AC011818	104371824	1	27211	1561	1373	30145
S/G/Y/R/B/O	NT_006397	AC114747	104371824	1	chr4	NT_006397	AC022570	104372319	1	9943	8065	18191	36199
S/G/Y/R/B/O	NT_006397	AC114747	104371824	1	chr4	NT_006397	AC105395	104208596	3	11015	8756	17938	37709
S/G/Y/R/B/O	NT_006397	AC114747	104371824	1			AC011818	104371824	1	15339	14858	17049	47246
S/G/Y/R/B/O	NT_006397	AC022570	104372319	1	chr4	NT_006397	AC097656	104399001	1	94402	1777	0	96179
S/G/Y/R/B/O	NT_006397	AC022570	104372319	1	chr4	NT_006397	AC023177	104507377	1	22799	1740	863	25402
S/G/Y/R/B/O	NT_006397	AC022570	104372319	1	chr4	NT_006397	AP001969	104368877	1	21213	0	2056	23269
S/G/Y/R/B/O	NT_006397	AC022570	104372319	1			AC098584	104399001	1	60671	9606	12429	82706
S/G/Y/R/B/O	NT_006397	AC097656	104399001	1	chr4	NT_006397	AC023177	104507377	1	148285	4570	863	153718
S/G/Y/R/B/O	NT_006397	AC097656	104399001	1	chr4	NT_006397	AC023553	104516786	1	18606	0	0	18606
S/G/Y/R/B/O	NT_006397	AC097656	104399001	1			AC098584	104516786	1	73386	7210	6966	87562
S/G/Y/R/B/O	NT_006397	AC023177	104507377	1	chr4	NT_006397	AC023553	104516786	1	42617	4476	456	47549
S/G/Y/R/B/O	NT_006397	AC023177	104507377	1	chr4	NT_006397	AC022570	104372319	1	22799	1740	863	25402
S/G/Y/R/B/O	NT_006397	AC023177	104507377	1			AC098584	104399001	1	26576	4025	0	30601
S/G/Y/R/B/O	NT_006397	AC023553	104516786	1	chr4	NT_006397	AC093832	104690641	3	19381	0	0	19381
S/G/Y/R/B/O	NT_006397	AC023553	104516786	1	chr4	NT_006397	AC097656	104399001	1	18606	0	0	18606
S/G/Y/R/B/O	NT_006397	AC093832	104690641	3	chr4	NT_006397	AC093828	104877873	3	0	0	0	0
S/G/Y/R/B/O	NT_006397	AC093828	104877873	3	chr4	NT_006397	AC095054	105021945	3	2000	0	0	2000
S/G/Y/R/B/O	NT_006397	AC093828	104877873	3			AP002332	105021945	1	95848	0	7487	103335
S/G/Y/R/B/O	NT_006397	AC095054	105021945	3	chr4	NT_006397	AC093721	105072609	3	0	1997	0	1997
S/G/Y/R/B/O	NT_006397	AC093721	105072609	3	chr4	NT_006397	AC096661	105198757	3	2000	0	0	2000
S/G/Y/R/B/O	NT_006397	AC093721	105072609	3			AC018969	104877873	1	62847	0	0	62847
S/G/Y/R/B/O	NT_006397	AC093721	105072609	3			AP001951	105198757	1	51486	0	8011	59497
S/G/Y/R/B/O	NT_006397	AC096661	105198757	3	chr4	NT_006397	AC093776	105320418	3	0	0	0	0
S/G/Y/R/B/O	NT_006397	AC096661	105198757	3			AC016078	105198757	1	61033	0	0	61033
S/G/Y/R/B/O	NT_006397	AC096661	105198757	3			AC018969	105198757	1	116486	0	1305	117791
S/G/Y/R/B/O	NT_006397	AC096661	105198757	3			AP001945	105072609	1	47200	0	21864	69064
S/G/Y/R/B/O	NT_006397	AC096661	105198757	3			AP001951	105072609	1	16657	0	0	16657
S/G/Y/R/B/O	NT_006397	AC096661	105198757	3			AP001952	105072609	3	14252	0	0	14252
S/G/Y/R/B/O	NT_006397	AC093776	105320418	3	chr4	NT_006397	AC108464	105478355	3	2000	0	0	2000
S/G/Y/R/B/O	NT_006397	AC093776	105320418	3			AC016078	105072609	1	88680	0	0	88680
S/G/Y/R/B/O	NT_006397	AC093776	105320418	3			AP001952	105478355	3	111320	0	0	111320
S/G/Y/R/B/O	NT_006397	AC093776	105320418	3			AP002742	105478355	1	61258	0	23643	84901
S/G/Y/R/B/O	NT_006397	AC108464	105478355	3	chr4	NT_006397	AC104816	105509753	3	2000	0	0	2000
S/G/Y/R/B/O	NT_006397	AC104816	105509753	3	chr4	NT_006397	AC113613	105676996	1	44246	0	0	44246
S/G/Y/R/B/O	NT_006397	AC104816	105509753	3	chr4	NT_006397	AC107389	105747108	1	32995	0	0	32995
S/G/Y/R/B/O	NT_006397	AC104816	105509753	3			AC067774	105509753	1	101634	5402	0	107036
S/G/Y/R/B/O	NT_006397	AC104816	105509753	3			AP001869	105676996	1	146048	0	0	146048
S/G/Y/R/B/O	NT_006397	AC113613	105676996	1	chr4	NT_006397	AC107389	105747108	1	177117	0	1281	178398
S/G/Y/R/B/O	NT_006397	AC113613	105676996	1	chr4	NT_006397	AC079616	105759690	3	73629	0	0	73629
S/G/Y/R/B/O	NT_006397	AC113613	105676996	1			AC067774	105676996	1	28593	2624	0	31217
S/G/Y/R/B/O	NT_006397	AC113613	105676996	1			AP001869	105747108	1	18474	0	0	18474
S/G/Y/R/B/O	NT_006397	AC113613	105676996	1			AP002821	105747108	1	69510	0	0	69510
S/G/Y/R/B/O	NT_006397	AC107389	105747108	1	chr4	NT_006397	AC079616	105759690	3	73557	0	0	73557
S/G/Y/R/B/O	NT_006397	AC107389	105747108	1	chr4	NT_006397	AC104816	105509753	3	32995	0	0	32995
S/G/Y/R/B/O	NT_006397	AC107389	105747108	1			AC067774	105747108	1	28593	2624	0	31217
S/G/Y/R/B/O	NT_006397	AC107389	105747108	1			AP001869	105676996	1	18474	0	0	18474
S/G/Y/R/B/O	NT_006397	AC107389	105747108	1			AP002821	105676996	1	65437	0	0	65437
S/G/Y/R/B/O	NT_006397	AC079616	105759690	3	chr4	NT_006397	AC096585	105925603	3	0	0	0	0
S/G/Y/R/B/O	NT_006397	AC079616	105759690	3	chr4	NT_006397	AC113613	105676996	1	73629	0	0	73629
S/G/Y/R/B/O	NT_006397	AC079616	105759690	3			AP001868	105676996	1	19608	0	4955	24563
S/G/Y/R/B/O	NT_006397	AC079616	105759690	3			AP002821	105676996	1	23473	0	75793	99266
S/G/Y/R/B/O	NT_006397	AC096585	105925603	3	chr4	NT_006397	AC004544	105965236	3	0	1999	0	1999
S/G/Y/R/B/O	NT_006397	AC096585	105925603	3			AP001868	105965236	1	41559	0	0	41559
S/G/Y/R/B/O	NT_006397	AC004544	105965236	3	chr4	NT_006397	AC079925	106131880	3	0	1999	0	1999
S/G/Y/R/B/O	NT_006397	AC004544	105965236	3			AP001868	105925603	1	17389	0	33270	50659
S/G/Y/R/B/O	NT_006397	AC079925	106131880	3	chr4	NT_006397	AC108515	106214545	1	66212	0	0	66212
S/G/Y/R/B/O	NT_006397	AC108515	106214545	1	chr4	NT_006397	AC021878	106300840	3	33437	0	0	33437
S/G/Y/R/B/O	NT_006397	AC108515	106214545	1			AP001865	106131880	1	15144	0	0	15144
S/G/Y/R/B/O	NT_006397	AC021878	106300840	3	chr4	NT_006397	AC108217	106462231	3	2000	0	0	2000
S/G/Y/R/B/O	NT_006397	AC021878	106300840	3			AP001865	106214545	1	105724	0	0	105724
S/G/Y/R/B/O	NT_006397	AC108217	106462231	3	chr4	NT_006397	AC034154	106571432	3	2000	0	0	2000
S/G/Y/R/B/O	NT_006397	AC034154	106571432	3	chr4	NT_006397	AP002333	106779995	1	19821	0	0	19821
S/G/Y/R/B/O	NT_006397	AC034154	106571432	3			AP001959	106462231	1	40110	0	0	40110
S/G/Y/R/B/O	NT_006397	AP002333	106779995	1	chr4	NT_006397	AC020652	106793153	1	52805	4106	6116	63027
S/G/Y/R/B/O	NT_006397	AP002333	106779995	1	chr4	NT_006397	AC018884	107695612	3	10514	0	0	10514
S/G/Y/R/B/O	NT_006397	AC020652	106793153	1	chr4	NT_006397	AC092434	106824495	1	0	0	0	0
S/G/Y/R/B/O	NT_006397	AC020652	106793153	1	chr4	NT_006397	AC018884	107695612	3	23869	5476	6979	36324
S/G/Y/R/B/O	NT_006397	AC020652	106793153	1			AC027528	107695612	1	16324	2544	0	18868
S/G/Y/R/B/O	NT_006397	AC020652	106793153	1			AC079859	106571432	1	20227	0	0	20227
S/G/Y/R/B/O	NT_006397	AC092434	106824495	1	chr4	NT_006397	AC114734	106835764	1	0	0	1206	1206
S/G/Y/R/B/O	NT_006397	AC092434	106824495	1	chr4	NT_006397	AC074120	106894839	3	137116	0	0	137116
S/G/Y/R/B/O	NT_006397	AC092434	106824495	1	chr4	NT_006397	AC108159	106911809	1	29587	0	0	29587
S/G/Y/R/B/O	NT_006397	AC092434	106824495	1			AP001818	103890469	3	12716	0	0	12716
S/G/Y/R/B/O	NT_006397	AC114734	106835764	1	chr4	NT_006397	AC074120	106894839	3	0	0	0	0
S/G/Y/R/B/O	NT_006397	AC114734	106835764	1	chr4	NT_006397	AC020749	109591827	1	70246	0	29947	100193
S/G/Y/R/B/O	NT_006397	AC114734	106835764	1	chr4	NT_006397	AC107381	109553490	3	45657	0	0	45657
S/G/Y/R/B/O	NT_006397	AC114734	106835764	1	chr4	NT_006397	AP001957	109487557	1	19876	0	0	19876
S/G/Y/R/B/O	NT_006397	AC074120	106894839	3	chr4	NT_006397	AC108159	106911809	1	133031	0	0	133031
S/G/Y/R/B/O	NT_006397	AC074120	106894839	3	chr4	NT_006397	AC092434	106824495	1	137116	0	0	137116
S/G/Y/R/B/O	NT_006397	AC074120	106894839	3			AP001818	103890469	3	116299	0	0	116299
S/G/Y/R/B/O	NT_006397	AC108159	106911809	1	chr4	NT_006397	AC009617	107129040	1	0	0	0	0
S/G/Y/R/B/O	NT_006397	AC108159	106911809	1	chr4	NT_006397	AC058823	107140188	3	21936	0	0	21936
S/G/Y/R/B/O	NT_006397	AC108159	106911809	1	chr4	NT_006397	AC092434	106824495	1	29587	0	0	29587
S/G/Y/R/B/O	NT_006397	AC108159	106911809	1			AP001818	106824495	3	114883	0	0	114883
S/G/Y/R/B/O	NT_006397	AC108159	106911809	1			AP001861	106824495	1	10735	0	0	10735
S/G/Y/R/B/O	NT_006397	AC009617	107129040	1	chr4	NT_006397	AC058823	107140188	3	8642	0	0	8642
S/G/Y/R/B/O	NT_006397	AC009617	107129040	1	chr4	NT_006397	AC019077	107316151	3	83199	5731	10933	99863
S/G/Y/R/B/O	NT_006397	AC009617	107129040	1	chr4	NT_006397	AC078961	107282469	3	117888	5731	10935	134554
S/G/Y/R/B/O	NT_006397	AC009617	107129040	1			AP002015	42525760	3	66737	2815	0	69552
S/G/Y/R/B/O	NT_006397	AC058823	107140188	3	chr4	NT_006397	AC078961	107282469	3	0	1998	0	1998
S/G/Y/R/B/O	NT_006397	AC058823	107140188	3	chr4	NT_006397	AC108159	106911809	1	21936	0	0	21936
S/G/Y/R/B/O	NT_006397	AC058823	107140188	3			AP001861	106911809	1	66334	0	0	66334
S/G/Y/R/B/O	NT_006397	AC078961	107282469	3	chr4	NT_006397	AC019077	107316151	3	146056	0	0	146056
S/G/Y/R/B/O	NT_006397	AC078961	107282469	3	chr4	NT_006397	AC009617	107129040	1	117888	5731	10935	134554
S/G/Y/R/B/O	NT_006397	AC078961	107282469	3			AP002015	107140188	3	88058	0	0	88058
S/G/Y/R/B/O	NT_006397	AC019077	107316151	3	chr4	NT_006397	AC073855	107504588	3	2000	0	0	2000
S/G/Y/R/B/O	NT_006397	AC019077	107316151	3	chr4	NT_006397	AC009617	107129040	1	83199	5731	10933	99863
S/G/Y/R/B/O	NT_006397	AC019077	107316151	3			AP002015	107282469	3	88054	0	0	88054
S/G/Y/R/B/O	NT_006397	AC073855	107504588	3	chr4	NT_006397	AC018884	107695612	3	0	0	0	0
S/G/Y/R/B/O	NT_006397	AC073855	107504588	3			AC009826	107282469	1	160228	0	0	160228
S/G/Y/R/B/O	NT_006397	AC073855	107504588	3			AC027528	107316151	1	20843	2218	2485	25546
S/G/Y/R/B/O	NT_006397	AC073855	107504588	3			AC079859	107316151	1	68042	5765	22676	96483
S/G/Y/R/B/O	NT_006397	AC073855	107504588	3			AP001866	107316151	3	78198	0	0	78198
S/G/Y/R/B/O	NT_006397	AC018884	107695612	3	chr4	NT_006397	AC093628	107862012	3	0	0	0	0
S/G/Y/R/B/O	NT_006397	AC018884	107695612	3	chr4	NT_006397	AC020652	106793153	1	23869	5476	6979	36324
S/G/Y/R/B/O	NT_006397	AC018884	107695612	3	chr4	NT_006397	AP002333	106779995	1	10514	0	0	10514
S/G/Y/R/B/O	NT_006397	AC018884	107695612	3			AC027528	106793153	1	117935	10726	29034	157695
S/G/Y/R/B/O	NT_006397	AC018884	107695612	3			AC079859	106793153	1	56155	6757	19745	82657
S/G/Y/R/B/O	NT_006397	AC093628	107862012	3	chr4	NT_006397	AC004063	108022003	3	95243	0	0	95243
S/G/Y/R/B/O	NT_006397	AC093628	107862012	3	chr4	NT_033068	AC107420	113184731	1	38944	2277	2117	43338
S/G/Y/R/B/O	NT_006397	AC093628	107862012	3	chr4	NT_033068	AP001953	113166119	1	16584	0	23750	40334
S/G/Y/R/B/O	NT_006397	AC093628	107862012	3			AP001862	113184731	3	111548	0	0	111548
S/G/Y/R/B/O	NT_006397	AC004063	108022003	3	chr4	NT_006397	AC093918	108103363	3	0	0	0	0
S/G/Y/R/B/O	NT_006397	AC004063	108022003	3			AP001862	107862012	3	92738	0	0	92738
S/G/Y/R/B/O	NT_006397	AC004063	108022003	3			AP001954	107862012	1	83677	0	0	83677
S/G/Y/R/B/O	NT_006397	AC093918	108103363	3	chr4	NT_006397	AC004053	108107248	3	0	0	0	0
S/G/Y/R/B/O	NT_006397	AC004053	108107248	3	chr4	NT_006397	AC105918	108272148	1	62805	0	0	62805
S/G/Y/R/B/O	NT_006397	AC004053	108107248	3			AC084769	107862012	1	58910	13641	6877	79428
S/G/Y/R/B/O	NT_006397	AC004053	108107248	3			AP001955	108272148	3	88641	0	0	88641
S/G/Y/R/B/O	NT_006397	AC105918	108272148	1	chr4	NT_006397	AC096577	108321988	3	101792	0	0	101792
S/G/Y/R/B/O	NT_006397	AC105918	108272148	1			AC084769	108107248	1	72380	13059	10122	95561
S/G/Y/R/B/O	NT_006397	AC096577	108321988	3	chr4	NT_006397	AC004069	108478083	3	0	1996	0	1996
S/G/Y/R/B/O	NT_006397	AC096577	108321988	3			AC084769	108478083	1	10162	0	0	10162
S/G/Y/R/B/O	NT_006397	AC004069	108478083	3	chr4	NT_006397	AC026029	108611734	3	0	1999	0	1999
S/G/Y/R/B/O	NT_006397	AC026029	108611734	3	chr4	NT_006397	AC106888	108782801	3	0	0	0	0
S/G/Y/R/B/O	NT_006397	AC026029	108611734	3			AC080028	108478083	1	17013	0	0	17013
S/G/Y/R/B/O	NT_006397	AC026029	108611734	3			AC084835	108478083	1	86325	19213	2208	107746
S/G/Y/R/B/O	NT_006397	AC106888	108782801	3	chr4	NT_006397	AC004066	108871328	3	0	0	0	0
S/G/Y/R/B/O	NT_006397	AC106888	108782801	3			AC080028	108478083	1	41153	2268	0	43421
S/G/Y/R/B/O	NT_006397	AC106888	108782801	3			AC084835	108478083	1	38615	11494	1962	52071
S/G/Y/R/B/O	NT_006397	AC106888	108782801	3			AC093696	108478083	1	40898	0	3268	44166
S/G/Y/R/B/O	NT_006397	AC106888	108782801	3			AC108936	108478083	1	84357	0	0	84357
S/G/Y/R/B/O	NT_006397	AC106888	108782801	3			AP001946	108478083	1	17332	0	20166	37498
S/G/Y/R/B/O	NT_006397	AC106888	108782801	3			AP001956	108478083	1	12858	0	4309	17167
S/G/Y/R/B/O	NT_006397	AC004066	108871328	3	chr4	NT_006397	AC105391	109002438	3	0	0	0	0
S/G/Y/R/B/O	NT_006397	AC004066	108871328	3			AC093696	108478083	1	67187	7786	37700	112673
S/G/Y/R/B/O	NT_006397	AC004066	108871328	3			AC108936	108478083	1	100018	0	0	100018
S/G/Y/R/B/O	NT_006397	AC004066	108871328	3			AP001946	108478083	1	75120	0	22974	98094
S/G/Y/R/B/O	NT_006397	AC004066	108871328	3			AP001956	108478083	1	34032	0	0	34032
S/G/Y/R/B/O	NT_006397	AC105391	109002438	3	chr4	NT_006397	AC008243	109143936	3	0	1985	0	1985
S/G/Y/R/B/O	NT_006397	AC105391	109002438	3			AP002335	52740584	2	111767	0	0	111767
S/G/Y/R/B/O	NT_006397	AC008243	109143936	3	chr4	NT_006397	AC093782	109303457	3	0	1999	0	1999
S/G/Y/R/B/O	NT_006397	AC093782	109303457	3	chr4	NT_006397	AC109361	109338399	3	0	1994	0	1994
S/G/Y/R/B/O	NT_006397	AC109361	109338399	3	chr4	NT_006397	AP001820	109470148	3	84404	0	0	84404
S/G/Y/R/B/O	NT_006397	AP001820	109470148	3	chr4	NT_006397	AP001957	109487557	1	12204	0	0	12204
S/G/Y/R/B/O	NT_006397	AP001957	109487557	1	chr4	NT_006397	AC107381	109553490	3	98049	0	0	98049
S/G/Y/R/B/O	NT_006397	AP001957	109487557	1	chr4	NT_006397	AC114734	106835764	1	19876	0	0	19876
S/G/Y/R/B/O	NT_006397	AC107381	109553490	3	chr4	NT_006397	AC020749	109591827	1	5234	0	19286	24520
S/G/Y/R/B/O	NT_006397	AC107381	109553490	3	chr4	NT_006397	AC114734	106835764	1	45657	0	0	45657
S/G/Y/R/B/O	NT_006397	AC020749	109591827	1	chr4	NT_006397	AC087108	109675657	1	20908	0	0	20908
S/G/Y/R/B/O	NT_006397	AC020749	109591827	1	chr4	NT_006397	AC114734	106835764	1	70246	0	29947	100193
S/G/Y/R/B/O	NT_006397	AC087108	109675657	1	chr4	NT_006397	AC093680	109774066	1	77996	0	0	77996
S/G/Y/R/B/O	NT_006397	AC087108	109675657	1			AP002076	106835764	3	67168	0	0	67168
S/G/Y/R/B/O	NT_006397	AC093680	109774066	1	chr4	NT_006397	AC073229	109846404	1	57020	0	13001	70021
S/G/Y/R/B/O	NT_006397	AC093680	109774066	1			AP002076	109675657	3	116990	0	0	116990
S/G/Y/R/B/O	NT_006397	AC073229	109846404	1	chr4	NT_006397	AC092458	109850472	3	76164	1807	0	77971
S/G/Y/R/B/O	NT_006397	AC073229	109846404	1			AC004046	109675657	1	48052	1807	0	49859
S/G/Y/R/B/O	NT_006397	AC073229	109846404	1			AC069206	109675657	1	16690	1835	1817	20342
S/G/Y/R/B/O	NT_006397	AC073229	109846404	1			AP002076	109774066	3	43240	0	12986	56226
S/G/Y/R/B/O	NT_006397	AC092458	109850472	3	chr4	NT_006397	AC105400	109969023	3	0	1994	0	1994
S/G/Y/R/B/O	NT_006397	AC092458	109850472	3			AC004046	109774066	1	95688	0	0	95688
S/G/Y/R/B/O	NT_006397	AC092458	109850472	3			AC069206	103579841	1	43464	0	2858	46322
S/G/Y/R/B/O	NT_006397	AC105400	109969023	3	chr4	NT_006397	AC092445	110059485	3	0	0	0	0
S/G/Y/R/B/O	NT_006397	AC105400	109969023	3			AC009552	103579841	1	11550	2023	15673	29246
S/G/Y/R/B/O	NT_006397	AC105400	109969023	3			AC016029	103579841	1	49113	0	0	49113
S/G/Y/R/B/O	NT_006397	AC105400	109969023	3			AC069206	103579841	1	43327	4600	34862	82789
S/G/Y/R/B/O	NT_006397	AC092445	110059485	3	chr4	NT_006397	AC104829	110231310	3	0	0	0	0
S/G/Y/R/B/O	NT_006397	AC092445	110059485	3			AC009552	109850472	1	65616	13834	46317	125767
S/G/Y/R/B/O	NT_006397	AC092445	110059485	3			AC016029	109850472	1	105840	0	45954	151794
S/G/Y/R/B/O	NT_006397	AC092445	110059485	3			AC068842	109850472	1	30775	0	1283	32058
S/G/Y/R/B/O	NT_006397	AC092445	110059485	3			AC069206	109850472	1	11262	8651	2993	22906
S/G/Y/R/B/O	NT_006397	AC092445	110059485	3			AP002740	109850472	1	65365	0	0	65365
S/G/Y/R/B/O	NT_006397	AC104829	110231310	3	chr4	NT_006397	AC004058	110295302	3	0	0	0	0
S/G/Y/R/B/O	NT_006397	AC104829	110231310	3			AC068842	109850472	1	57186	1596	0	58782
S/G/Y/R/B/O	NT_006397	AC004058	110295302	3	chr4	NT_006397	AC003099	110331702	3	0	0	0	0
S/G/Y/R/B/O	NT_006397	AC004058	110295302	3			AC068842	109850472	1	21209	0	0	21209
S/G/Y/R/B/O	NT_006397	AC004058	110295302	3			AP001821	238425220	3	20083	0	0	20083
S/G/Y/R/B/O	NT_006397	AC003099	110331702	3	chr4	NT_006397	AP001819	110426727	3	0	0	0	0
S/G/Y/R/B/O	NT_006397	AC003099	110331702	3			AC068842	238425220	1	19993	0	0	19993
S/G/Y/R/B/O	NT_006397	AC003099	110331702	3			AC079110	238425220	1	16298	0	0	16298
S/G/Y/R/B/O	NT_006397	AC003099	110331702	3			AC106863	238425220	1	19688	0	0	19688
S/G/Y/R/B/O	NT_006397	AC003099	110331702	3			AP001821	238425220	3	88353	0	0	88353
S/G/Y/R/B/O	NT_006397	AC003099	110331702	3			AP001863	238425220	1	41800	0	14809	56609
S/G/Y/R/B/O	NT_006397	AP001819	110426727	3	chr4	NT_006397	AC104663	110588348	3	0	1997	0	1997
S/G/Y/R/B/O	NT_006397	AP001819	110426727	3			AC004048	238425220	3	100276	0	0	100276
S/G/Y/R/B/O	NT_006397	AP001819	110426727	3			AC079110	238425220	1	132538	0	0	132538
S/G/Y/R/B/O	NT_006397	AP001819	110426727	3			AC106863	110588348	1	69579	0	76638	146217
S/G/Y/R/B/O	NT_006397	AC104663	110588348	3	chr4	NT_006397	AC003100	110723973	3	0	0	1873	1873
S/G/Y/R/B/O	NT_006397	AC104663	110588348	3			AC026921	110723973	1	38235	1888	6988	47111
S/G/Y/R/B/O	NT_006397	AC104663	110588348	3			AP001958	110426727	1	58074	0	15523	73597
S/G/Y/R/B/O	NT_006397	AC003100	110723973	3	chr4	NT_006397	AC004055	110812384	3	0	0	0	0
S/G/Y/R/B/O	NT_006397	AC003100	110723973	3			AC026921	110426727	1	39619	0	31565	71184
S/G/Y/R/B/O	NT_006397	AC003100	110723973	3			AP001958	110588348	1	86664	0	0	86664
S/G/Y/R/B/O	NT_006397	AC004055	110812384	3	chr4	NT_006397	AC098586	110922219	1	10036	0	0	10036
S/G/Y/R/B/O	NT_006397	AC004055	110812384	3			AC026921	110588348	1	41384	0	0	41384
S/G/Y/R/B/O	NT_006397	AC004055	110812384	3			AP001958	110922219	1	30486	0	0	30486
S/G/Y/R/B/O	NT_006397	AC098586	110922219	1	chr4	NT_006397	AC060815	111047375	1	109241	7317	1007	117565
S/G/Y/R/B/O	NT_006397	AC098586	110922219	1	chr4	NT_006397	AC084840	111052433	1	97658	0	2659	100317
S/G/Y/R/B/O	NT_006397	AC098586	110922219	1			AC084810	111047375	1	76429	26802	4951	108182
S/G/Y/R/B/O	NT_006397	AC060815	111047375	1	chr4	NT_006397	AC084840	111052433	1	48502	2629	15563	66694
S/G/Y/R/B/O	NT_006397	AC060815	111047375	1			AC084810	110812384	1	47445	20185	7078	74708
S/G/Y/R/B/O	NT_006397	AC084840	111052433	1	chr4	NT_006397	AC106861	111067749	3	4786	0	0	4786
S/G/Y/R/B/O	NT_006397	AC084840	111052433	1	chr4	NT_006397	AC098586	110922219	1	97658	0	2659	100317
S/G/Y/R/B/O	NT_006397	AC084840	111052433	1			AC084810	111047375	1	67318	21214	6411	94943
S/G/Y/R/B/O	NT_006397	AC106861	111067749	3	chr4	NT_006397	AC004045	111072535	3	0	1991	0	1991
S/G/Y/R/B/O	NT_006397	AC004045	111072535	3	chr4	NT_006397	AC108170	111176886	3	0	1992	0	1992
S/G/Y/R/B/O	NT_006397	AC004045	111072535	3			AC084810	111052433	1	63065	3238	5554	71857
S/G/Y/R/B/O	NT_006397	AC108170	111176886	3	chr4	NT_006397	AC096564	111201806	3	2000	0	0	2000
S/G/Y/R/B/O	NT_006397	AC096564	111201806	3	chr4	NT_006397	AC114733	111363123	1	134646	0	0	134646
S/G/Y/R/B/O	NT_006397	AC096564	111201806	3	chr4	NT_006397	AC000016	111380083	1	40799	0	0	40799
S/G/Y/R/B/O	NT_006397	AC114733	111363123	1	chr4	NT_006397	AC000016	111380083	1	45902	0	12466	58368
S/G/Y/R/B/O	NT_006397	AC114733	111363123	1	chr4	NT_006397	AC021524	111503191	1	11942	0	2779	14721
S/G/Y/R/B/O	NT_006397	AC114733	111363123	1	chr4	NT_006397	AP002077	111490327	1	14493	0	1208	15701
S/G/Y/R/B/O	NT_006397	AC000016	111380083	1	chr4	NT_006397	AF095703	111398846	3	0	0	41052	41052
S/G/Y/R/B/O	NT_006397	AC000016	111380083	1	chr4	NT_006397	AC004059	111449594	3	35470	0	0	35470
S/G/Y/R/B/O	NT_006397	AC000016	111380083	1	chr4	NT_006397	AC021524	111503191	1	48834	1683	13212	63729
S/G/Y/R/B/O	NT_006397	AC000016	111380083	1	chr4	NT_006397	AC096564	111201806	3	40799	0	0	40799
S/G/Y/R/B/O	NT_006397	AC000016	111380083	1	chr4	NT_006397	AP002077	111490327	1	34455	0	45038	79493
S/G/Y/R/B/O	NT_006397	AF095703	111398846	3	chr4	NT_006397	AC004059	111449594	3	0	0	0	0
S/G/Y/R/B/O	NT_006397	AF095703	111398846	3	chr4	NT_006397	AC021524	111503191	1	31421	3832	12281	47534
S/G/Y/R/B/O	NT_006397	AF095703	111398846	3	chr4	NT_006397	AP002077	111490327	1	50494	0	0	50494
S/G/Y/R/B/O	NT_006397	AC004059	111449594	3	chr4	NT_006397	AP002077	111490327	1	32721	0	0	32721
S/G/Y/R/B/O	NT_006397	AC004059	111449594	3	chr4	NT_006397	AC000016	111380083	1	35470	0	0	35470
S/G/Y/R/B/O	NT_006397	AC004059	111449594	3	chr4	NT_006397	AC021524	111503191	1	36190	4558	1290	42038
S/G/Y/R/B/O	NT_006397	AP002077	111490327	1	chr4	NT_006397	AC021524	111503191	1	104106	12768	2572	119446
S/G/Y/R/B/O	NT_006397	AP002077	111490327	1	chr4	NT_006397	AC000016	111380083	1	34455	0	45038	79493
S/G/Y/R/B/O	NT_006397	AP002077	111490327	1	chr4	NT_006397	AC092539	111540152	1	44278	0	0	44278
S/G/Y/R/B/O	NT_006397	AP002077	111490327	1	chr4	NT_006397	AC097067	111556604	3	28482	0	0	28482
S/G/Y/R/B/O	NT_006397	AP002077	111490327	1	chr4	NT_006397	AC114733	111363123	1	14493	0	1208	15701
S/G/Y/R/B/O	NT_006397	AP002077	111490327	1	chr4	NT_006397	AF095703	111398846	3	50494	0	0	50494
S/G/Y/R/B/O	NT_006397	AP002077	111490327	1			AC026319	111503191	1	10862	0	0	10862
S/G/Y/R/B/O	NT_006397	AP002077	111490327	1			AC026988	111503191	1	12566	0	0	12566
S/G/Y/R/B/O	NT_006397	AC021524	111503191	1	chr4	NT_006397	AC092539	111540152	1	12716	7299	0	20015
S/G/Y/R/B/O	NT_006397	AC021524	111503191	1	chr4	NT_006397	AC000016	111380083	1	48834	1683	13212	63729
S/G/Y/R/B/O	NT_006397	AC021524	111503191	1	chr4	NT_006397	AC004059	111449594	3	36190	4558	1290	42038
S/G/Y/R/B/O	NT_006397	AC021524	111503191	1	chr4	NT_006397	AC114733	111363123	1	11942	0	2779	14721
S/G/Y/R/B/O	NT_006397	AC021524	111503191	1	chr4	NT_006397	AF095703	111398846	3	31421	3832	12281	47534
S/G/Y/R/B/O	NT_006397	AC092539	111540152	1	chr4	NT_006397	AC097067	111556604	3	130683	1691	0	132374
S/G/Y/R/B/O	NT_006397	AC092539	111540152	1	chr4	NT_006397	AP002077	111490327	1	44278	0	0	44278
S/G/Y/R/B/O	NT_006397	AC092539	111540152	1			AC026319	111503191	1	70671	0	47992	118663
S/G/Y/R/B/O	NT_006397	AC092539	111540152	1			AC026988	111503191	1	92357	4572	2591	99520
S/G/Y/R/B/O	NT_006397	AC097067	111556604	3	chr4	NT_006397	AC005510	111693104	3	0	1996	0	1996
S/G/Y/R/B/O	NT_006397	AC097067	111556604	3	chr4	NT_006397	AP002077	111490327	1	28482	0	0	28482
S/G/Y/R/B/O	NT_006397	AC097067	111556604	3			AC026319	111503191	1	63756	2673	39209	105638
S/G/Y/R/B/O	NT_006397	AC097067	111556604	3			AC026988	111503191	1	121190	4572	2591	128353
S/G/Y/R/B/O	NT_006397	AC005510	111693104	3	chr4	NT_006397	AC093646	111859572	3	0	0	0	0
S/G/Y/R/B/O	NT_006397	AC005510	111693104	3			AC018945	111490327	1	61138	1909	3496	66543
S/G/Y/R/B/O	NT_006397	AC005510	111693104	3			AC026988	111490327	1	36341	0	0	36341
S/G/Y/R/B/O	NT_006397	AC093646	111859572	3	chr4	NT_006397	AC084209	111892053	3	2000	0	0	2000
S/G/Y/R/B/O	NT_006397	AC093646	111859572	3			AC018945	111556604	1	29573	4617	0	34190
S/G/Y/R/B/O	NT_006397	AC084209	111892053	3	chr4	NT_006397	AC107071	112042033	3	2000	0	0	2000
S/G/Y/R/B/O	NT_006397	AC084209	111892053	3			AC018945	111892053	1	38308	14306	1245	53859
S/G/Y/R/B/O	NT_006397	AC107071	112042033	3	chr4	NT_006397	AC097473	112150827	3	0	1094	0	1094
S/G/Y/R/B/O	NT_006397	AC107071	112042033	3			AP002078	112150827	3	103784	0	0	103784
S/G/Y/R/B/O	NT_006397	AC107071	112042033	3			AP002079	112150827	1	62695	0	4396	67091
S/G/Y/R/B/O	NT_006397	AC097473	112150827	3	chr4	NT_006397	AC073427	112300305	3	2000	0	0	2000
S/G/Y/R/B/O	NT_006397	AC073427	112300305	3	chr4	NT_006397	AC095066	112455453	3	0	0	0	0
S/G/Y/R/B/O	NT_006397	AC073427	112300305	3			AC009571	112042033	1	116149	4504	0	120653
S/G/Y/R/B/O	NT_006397	AC073427	112300305	3			AP002081	112150827	1	20680	0	0	20680
S/G/Y/R/B/O	NT_006397	AC095066	112455453	3	chr4	NT_006397	AC004701	112551187	3	0	0	0	0
S/G/Y/R/B/O	NT_006397	AC095066	112455453	3			AC009571	112150827	1	44314	0	0	44314
S/G/Y/R/B/O	NT_006397	AC095066	112455453	3			AC079099	112150827	1	61902	11690	7714	81306
S/G/Y/R/B/O	NT_006397	AC095066	112455453	3			AP002081	112150827	1	65382	3471	1235	70088
S/G/Y/R/B/O	NT_006397	AC004701	112551187	3	chr4	NT_006397	AC004051	112693026	3	15569	0	0	15569
S/G/Y/R/B/O	NT_006397	AC004701	112551187	3			AC079099	112693026	1	43330	7243	0	50573
S/G/Y/R/B/O	NT_006397	AC004701	112551187	3			AP002021	112693026	1	41237	0	14924	56161
S/G/Y/R/B/O	NT_006397	AC004701	112551187	3			AP002081	112693026	1	22837	0	0	22837
S/G/Y/R/B/O	NT_006397	AC004051	112693026	3
S/G/Y/R/B/O	NT_006397	AC004051	112693026	3			AP002021	112551187	1	33227	1647	0	34874