Chromosome 4 - Clone Overlaps - Single Contig
Description of this page
Main Reports Page
Main Assembly Page
Main Overlap Page
Whole Chromosome
Single Contigs
Line color code:
White: overlap with immediately succeeding clone
Green: overlap with clone in same contig
Pink: overlap with clone in same chromosome, different contig
Red: overlap with clone on different chromosome
Yellow: overlap with clone not used in assembly
NT_026996
NT_006111
NT_022865
NT_006081
NT_033075
NT_029956
NT_006051
NT_033060
NT_033064
NT_006362
NT_006307
NT_006342
NT_029958
NT_016407
NT_033056
NT_030649
NT_006344
NT_023072
NT_033076
NT_006350
NT_006285
NT_006316
NT_023052
NT_006189
NT_022794
NT_006305
NT_022751
NT_022995
NT_033067
NT_006098
NT_029274
NT_033069
NT_016297
NT_022782
NT_033059
NT_006238
NT_022831
NT_022853
NT_022850
NT_022778
NT_022852
NT_033063
NT_022813
NT_022836
NT_022862
NT_006303
NT_030640
NT_033073
NT_006281
NT_006216
NT_033072
NT_022760
NT_006109
NT_006328
NT_022844
NT_030642
NT_006114
NT_030659
NT_006204
NT_033074
NT_023068
NT_006201
NT_006383
NT_006397
NT_033061
NT_033068
NT_006365
NT_028147
NT_028173
NT_006371
NT_025694
NT_031780
NT_016599
NT_031781
NT_016354
NT_033055
NT_033062
NT_033065
NT_006167
NT_006302
NT_022755
NT_022753
NT_022803
NT_022846
NT_022856
NT_022805
NT_022819
NT_022845
NT_006124
NT_022811
NT_006127
NT_006258
NT_016606
NT_029950
NT_028160
NT_029954
NT_022851
NT_022832
NT_015169
NT_006129
NT_022740
NT_029955
NT_022801
NT_022824
NT_006171
NT_022776
NT_022768
NT_006198
NT_006257
NT_022775
NT_006118
NT_022792
NT_006256
NT_006169
NT_022841
NT_033070
NT_022800
NT_033066
NT_033071
NT_028146
NT_029961
NT_025688
NT_016297
Links
Contig1
Acc1
Start1
Phs
Chr2
Contig2
Acc2
Start2
Phs
Strong Overlap
Medium Overlap
Weak Overlap
Total Overlap
S
/
G
/
Y
/
R
/
B
/
O
NT_016297
AC036185
40369700
1
chr4
NT_016297
AC093271
40376062
1
25161
0
10571
35732
S
/
G
/
Y
/
R
/
B
/
O
NT_016297
AC036185
40369700
1
chr4
NT_016297
AC108022
41527863
3
51419
0
0
51419
S
/
G
/
Y
/
R
/
B
/
O
NT_016297
AC036185
40369700
1
 
 
AC027607
39799447
1
49737
0
1265
51002
S
/
G
/
Y
/
R
/
B
/
O
NT_016297
AC093271
40376062
1
chr4
NT_016297
AC079239
40502006
3
0
0
0
0
S
/
G
/
Y
/
R
/
B
/
O
NT_016297
AC093271
40376062
1
chr4
NT_016297
AC022463
40990027
3
100572
1850
0
102422
S
/
G
/
Y
/
R
/
B
/
O
NT_016297
AC093271
40376062
1
 
 
AC027607
61619703
1
70645
0
23839
94484
S
/
G
/
Y
/
R
/
B
/
O
NT_016297
AC079239
40502006
3
chr4
NT_016297
AC093728
40684412
3
0
1997
0
1997
S
/
G
/
Y
/
R
/
B
/
O
NT_016297
AC093728
40684412
3
chr4
NT_016297
AC093746
40796846
3
2000
0
0
2000
S
/
G
/
Y
/
R
/
B
/
O
NT_016297
AC093746
40796846
3
chr4
NT_016297
AC116564
40964237
1
40909
11619
19225
71753
S
/
G
/
Y
/
R
/
B
/
O
NT_016297
AC093746
40796846
3
chr4
NT_016297
AC016181
41509261
1
117982
2640
8092
128714
S
/
G
/
Y
/
R
/
B
/
O
NT_016297
AC116564
40964237
1
chr4
NT_016297
AC022463
40990027
3
0
0
0
0
S
/
G
/
Y
/
R
/
B
/
O
NT_016297
AC116564
40964237
1
chr4
NT_016297
AC016181
41509261
1
30705
14340
30624
75669
S
/
G
/
Y
/
R
/
B
/
O
NT_016297
AC022463
40990027
3
chr4
NT_016297
AC107399
41174506
1
100850
1724
0
102574
S
/
G
/
Y
/
R
/
B
/
O
NT_016297
AC022463
40990027
3
chr4
NT_016297
AC093271
40376062
1
100572
1850
0
102422
S
/
G
/
Y
/
R
/
B
/
O
NT_016297
AC107399
41174506
1
chr4
NT_016297
AC104690
41187710
3
61839
0
0
61839
S
/
G
/
Y
/
R
/
B
/
O
NT_016297
AC104690
41187710
3
chr4
NT_016297
AC105386
41312410
3
2000
0
0
2000
S
/
G
/
Y
/
R
/
B
/
O
NT_016297
AC105386
41312410
3
chr4
NT_016297
AL136537
41345960
3
4000
0
0
4000
S
/
G
/
Y
/
R
/
B
/
O
NT_016297
AL136537
41345960
3
chr4
NT_016297
AC016181
41509261
1
33546
0
2504
36050
S
/
G
/
Y
/
R
/
B
/
O
NT_016297
AC016181
41509261
1
chr4
NT_016297
AC108022
41527863
3
0
0
0
0
S
/
G
/
Y
/
R
/
B
/
O
NT_016297
AC016181
41509261
1
chr4
NT_016297
AC093746
40796846
3
117982
2640
8092
128714
S
/
G
/
Y
/
R
/
B
/
O
NT_016297
AC016181
41509261
1
chr4
NT_016297
AC116564
40964237
1
30705
14340
30624
75669
S
/
G
/
Y
/
R
/
B
/
O
NT_016297
AC108022
41527863
3
chr4
NT_016297
AC021106
41690472
3
0
1995
0
1995
S
/
G
/
Y
/
R
/
B
/
O
NT_016297
AC108022
41527863
3
chr4
NT_016297
AC036185
40369700
1
51419
0
0
51419
S
/
G
/
Y
/
R
/
B
/
O
NT_016297
AC108022
41527863
3
 
 
AL390202
40369700
1
52079
0
0
52079
S
/
G
/
Y
/
R
/
B
/
O
NT_016297
AC021106
41690472
3
chr4
NT_016297
AC108933
41883579
3
2000
0
0
2000
S
/
G
/
Y
/
R
/
B
/
O
NT_016297
AC021106
41690472
3
 
 
AL390202
41883579
1
60650
2421
0
63071
S
/
G
/
Y
/
R
/
B
/
O
NT_016297
AC108933
41883579
3
chr4
NT_016297
AC098680
41968904
3
0
1997
0
1997
S
/
G
/
Y
/
R
/
B
/
O
NT_016297
AC098680
41968904
3
chr4
NT_016297
AC024023
42147816
3
0
0
0
0
S
/
G
/
Y
/
R
/
B
/
O
NT_016297
AC024023
42147816
3
chr4
NT_016297
AC106893
42307691
3
2000
0
0
2000
S
/
G
/
Y
/
R
/
B
/
O
NT_016297
AC106893
42307691
3
chr4
NT_016297
AC096739
42354357
3
2000
0
0
2000
S
/
G
/
Y
/
R
/
B
/
O
NT_016297
AC106893
42307691
3
 
 
AC079088
42147816
1
20584
9332
8149
38065
S
/
G
/
Y
/
R
/
B
/
O
NT_016297
AC096739
42354357
3
chr4
NT_016297
AC021860
42448839
3
0
1998
0
1998
S
/
G
/
Y
/
R
/
B
/
O
NT_016297
AC096739
42354357
3
 
 
AC079088
42448839
1
38420
14761
7246
60427
S
/
G
/
Y
/
R
/
B
/
O
NT_016297
AC021860
42448839
3