Chromosome 4 - Clone Overlaps - Single Contig
Description of this page
Main Reports Page
Main Assembly Page
Main Overlap Page
Whole Chromosome
Single Contigs
Line color code:
White: overlap with immediately succeeding clone
Green: overlap with clone in same contig
Pink: overlap with clone in same chromosome, different contig
Red: overlap with clone on different chromosome
Yellow: overlap with clone not used in assembly
NT_026996
NT_006111
NT_022865
NT_006081
NT_033075
NT_029956
NT_006051
NT_033060
NT_033064
NT_006362
NT_006307
NT_006342
NT_029958
NT_016407
NT_033056
NT_030649
NT_006344
NT_023072
NT_033076
NT_006350
NT_006285
NT_006316
NT_023052
NT_006189
NT_022794
NT_006305
NT_022751
NT_022995
NT_033067
NT_006098
NT_029274
NT_033069
NT_016297
NT_022782
NT_033059
NT_006238
NT_022831
NT_022853
NT_022850
NT_022778
NT_022852
NT_033063
NT_022813
NT_022836
NT_022862
NT_006303
NT_030640
NT_033073
NT_006281
NT_006216
NT_033072
NT_022760
NT_006109
NT_006328
NT_022844
NT_030642
NT_006114
NT_030659
NT_006204
NT_033074
NT_023068
NT_006201
NT_006383
NT_006397
NT_033061
NT_033068
NT_006365
NT_028147
NT_028173
NT_006371
NT_025694
NT_031780
NT_016599
NT_031781
NT_016354
NT_033055
NT_033062
NT_033065
NT_006167
NT_006302
NT_022755
NT_022753
NT_022803
NT_022846
NT_022856
NT_022805
NT_022819
NT_022845
NT_006124
NT_022811
NT_006127
NT_006258
NT_016606
NT_029950
NT_028160
NT_029954
NT_022851
NT_022832
NT_015169
NT_006129
NT_022740
NT_029955
NT_022801
NT_022824
NT_006171
NT_022776
NT_022768
NT_006198
NT_006257
NT_022775
NT_006118
NT_022792
NT_006256
NT_006169
NT_022841
NT_033070
NT_022800
NT_033066
NT_033071
NT_028146
NT_029961
NT_025688
NT_022846
Links
Contig1
Acc1
Start1
Phs
Chr2
Contig2
Acc2
Start2
Phs
Strong Overlap
Medium Overlap
Weak Overlap
Total Overlap
S
/
G
/
Y
/
R
/
B
/
O
NT_022846
AC027749
138178845
1
chr4
NT_022846
AC079994
138188700
1
108582
7381
9475
125438
S
/
G
/
Y
/
R
/
B
/
O
NT_022846
AC027749
138178845
1
chr4
NT_022846
AC084378
138363308
1
28290
16106
2320
46716
S
/
G
/
Y
/
R
/
B
/
O
NT_022846
AC079994
138188700
1
chr4
NT_022846
AC084378
138363308
1
133097
15659
25514
174270
S
/
G
/
Y
/
R
/
B
/
O
NT_022846
AC084378
138363308
1
chr4
NT_022846
AC108492
138366622
1
0
0
0
0
S
/
G
/
Y
/
R
/
B
/
O
NT_022846
AC084378
138363308
1
chr4
NT_022846
AC027749
138178845
1
28290
16106
2320
46716
S
/
G
/
Y
/
R
/
B
/
O
NT_022846
AC108492
138366622
1
chr4
NT_022846
AC079380
138398182
3
76908
0
541
77449
S
/
G
/
Y
/
R
/
B
/
O
NT_022846
AC108492
138366622
1
chr4
NT_022846
AC096763
138566444
3
90109
0
0
90109
S
/
G
/
Y
/
R
/
B
/
O
NT_022846
AC079380
138398182
3
chr4
NT_022846
AC096763
138566444
3
0
0
0
0
S
/
G
/
Y
/
R
/
B
/
O
NT_022846
AC096763
138566444
3
chr4
NT_022846
AC015631
138735154
3
0
1999
0
1999
S
/
G
/
Y
/
R
/
B
/
O
NT_022846
AC096763
138566444
3
chr4
NT_022846
AC108492
138366622
1
90109
0
0
90109
S
/
G
/
Y
/
R
/
B
/
O
NT_022846
AC015631
138735154
3
chr4
NT_022846
AC109830
138878293
3
2000
0
0
2000
S
/
G
/
Y
/
R
/
B
/
O
NT_022846
AC109830
138878293
3
chr4
NT_022846
AC096748
138920825
1
2000
0
0
2000
S
/
G
/
Y
/
R
/
B
/
O
NT_022846
AC096748
138920825
1
chr4
NT_022846
AC107221
139095574
1
66682
0
0
66682
S
/
G
/
Y
/
R
/
B
/
O
NT_022846
AC107221
139095574
1
chr4
NT_022846
AC027583
139097554
1
0
0
0
0
S
/
G
/
Y
/
R
/
B
/
O
NT_022846
AC027583
139097554
1
chr4
NT_022846
AC109350
139214128
3
0
0
0
0
S
/
G
/
Y
/
R
/
B
/
O
NT_022846
AC027583
139097554
1
chr4
NT_022846
AC093722
139272196
3
87721
2780
0
90501
S
/
G
/
Y
/
R
/
B
/
O
NT_022846
AC027583
139097554
1
chr4
NT_022846
AC096738
139433604
3
24417
9139
0
33556
S
/
G
/
Y
/
R
/
B
/
O
NT_022846
AC027583
139097554
1
chr4
NT_022846
AC104619
139465626
3
21357
1525
0
22882
S
/
G
/
Y
/
R
/
B
/
O
NT_022846
AC109350
139214128
3
chr4
NT_022846
AC093722
139272196
3
0
1917
0
1917
S
/
G
/
Y
/
R
/
B
/
O
NT_022846
AC093722
139272196
3
chr4
NT_022846
AC096738
139433604
3
0
0
1999
1999
S
/
G
/
Y
/
R
/
B
/
O
NT_022846
AC093722
139272196
3
chr4
NT_022846
AC027583
139097554
1
87721
2780
0
90501
S
/
G
/
Y
/
R
/
B
/
O
NT_022846
AC096738
139433604
3
chr4
NT_022846
AC104619
139465626
3
0
0
0
0
S
/
G
/
Y
/
R
/
B
/
O
NT_022846
AC096738
139433604
3
chr4
NT_022846
AC027583
139097554
1
24417
9139
0
33556
S
/
G
/
Y
/
R
/
B
/
O
NT_022846
AC104619
139465626
3
chr4
NT_022846
AC107463
139651375
1
0
0
0
0
S
/
G
/
Y
/
R
/
B
/
O
NT_022846
AC104619
139465626
3
chr4
NT_022846
AC027583
139097554
1
21357
1525
0
22882
S
/
G
/
Y
/
R
/
B
/
O
NT_022846
AC107463
139651375
1
chr4
NT_022846
AC104062
139741036
3
106505
0
0
106505
S
/
G
/
Y
/
R
/
B
/
O
NT_022846
AC107463
139651375
1
chr4
NT_022846
AC021559
139889615
1
47870
0
0
47870
S
/
G
/
Y
/
R
/
B
/
O
NT_022846
AC104062
139741036
3
chr4
NT_022846
AC021559
139889615
1
81040
0
0
81040
S
/
G
/
Y
/
R
/
B
/
O
NT_022846
AC104062
139741036
3
chr4
NT_022856
AC108867
140350405
1
38751
0
0
38751
S
/
G
/
Y
/
R
/
B
/
O
NT_022846
AC021559
139889615
1
chr4
NT_022846
AC105252
139917091
3
0
0
0
0
S
/
G
/
Y
/
R
/
B
/
O
NT_022846
AC021559
139889615
1
chr4
NT_022846
AC107463
139651375
1
47870
0
0
47870
S
/
G
/
Y
/
R
/
B
/
O
NT_022846
AC021559
139889615
1
chr4
NT_022856
AC108867
140350405
1
83926
0
0
83926
S
/
G
/
Y
/
R
/
B
/
O
NT_022846
AC105252
139917091
3
chr4
NT_022846
AC108052
140100885
3
2000
0
0
2000
S
/
G
/
Y
/
R
/
B
/
O
NT_022846
AC108052
140100885
3