Chromosome 5 - Clone Overlaps - Single Contig
Description of this page
Main Reports Page
Main Assembly Page
Main Overlap Page
Whole Chromosome
Single Contigs
Line color code:
White: overlap with immediately succeeding clone
Green: overlap with clone in same contig
Pink: overlap with clone in same chromosome, different contig
Red: overlap with clone on different chromosome
Yellow: overlap with clone not used in assembly
NT_033086
NT_023089
NT_006576
NT_033103
NT_029977
NT_016779
NT_033104
NT_023110
NT_033119
NT_023097
NT_023084
NT_023115
NT_023315
NT_033112
NT_006547
NT_023162
NT_006577
NT_023114
NT_023216
NT_023124
NT_026281
NT_023085
NT_033113
NT_033110
NT_006679
NT_023195
NT_033085
NT_006702
NT_023098
NT_028188
NT_031794
NT_023102
NT_023081
NT_006693
NT_016864
NT_033115
NT_033092
NT_006665
NT_006497
NT_006431
NT_033093
NT_006790
NT_006713
NT_026283
NT_023083
NT_033077
NT_033111
NT_033079
NT_007022
NT_006540
NT_030680
NT_029973
NT_028179
NT_033118
NT_006731
NT_023148
NT_023290
NT_033094
NT_033116
NT_006654
NT_033095
NT_033098
NT_033082
NT_033096
NT_023091
NT_006789
NT_033108
NT_006899
NT_006780
NT_030685
NT_025721
NT_033106
NT_025702
NT_023192
NT_029295
NT_033097
NT_016755
NT_029975
NT_033083
NT_033084
NT_023238
NT_033105
NT_007072
NT_033091
NT_016714
NT_006859
NT_006489
NT_029289
NT_033078
NT_023269
NT_023248
NT_030691
NT_006788
NT_030698
NT_033117
NT_033080
NT_023133
NT_006907
NT_023132
NT_033089
NT_006725
NT_023093
NT_006802
NT_006932
NT_006519
NT_006540
Links
Contig1
Acc1
Start1
Phs
Chr2
Contig2
Acc2
Start2
Phs
Strong Overlap
Medium Overlap
Weak Overlap
Total Overlap
S
/
G
/
Y
/
R
/
B
/
O
NT_006540
AC023770
87423864
1
chr5
NT_006540
AC114942
87435017
3
52461
0
997
53458
S
/
G
/
Y
/
R
/
B
/
O
NT_006540
AC023770
87423864
1
chr5
NT_006540
AC025466
87553084
3
47892
0
9401
57293
S
/
G
/
Y
/
R
/
B
/
O
NT_006540
AC023770
87423864
1
chr5
NT_006540
AC025759
87586902
3
69010
4321
24727
98058
S
/
G
/
Y
/
R
/
B
/
O
NT_006540
AC114942
87435017
3
chr5
NT_006540
AC025466
87553084
3
22793
0
0
22793
S
/
G
/
Y
/
R
/
B
/
O
NT_006540
AC025466
87553084
3
chr5
NT_006540
AC025759
87586902
3
44448
0
0
44448
S
/
G
/
Y
/
R
/
B
/
O
NT_006540
AC025466
87553084
3
chr5
NT_006540
AC023770
87423864
1
47892
0
9401
57293
S
/
G
/
Y
/
R
/
B
/
O
NT_006540
AC025759
87586902
3
chr5
NT_006540
AC010486
87641201
3
48381
0
0
48381
S
/
G
/
Y
/
R
/
B
/
O
NT_006540
AC025759
87586902
3
chr5
NT_006540
AC023770
87423864
1
69010
4321
24727
98058
S
/
G
/
Y
/
R
/
B
/
O
NT_006540
AC010486
87641201
3
chr5
NT_006540
AC026700
87746435
3
0
0
0
0
S
/
G
/
Y
/
R
/
B
/
O
NT_006540
AC010486
87641201
3
chr5
NT_006540
AC021175
88106429
1
43769
2779
0
46548
S
/
G
/
Y
/
R
/
B
/
O
NT_006540
AC026700
87746435
3
chr5
NT_006540
AC010595
87794581
3
40752
0
0
40752
S
/
G
/
Y
/
R
/
B
/
O
NT_006540
AC026700
87746435
3
chr5
NT_006540
AC021175
88106429
1
40881
6291
1076
48248
S
/
G
/
Y
/
R
/
B
/
O
NT_006540
AC010595
87794581
3
chr5
NT_006540
AC010639
87933313
3
23661
0
0
23661
S
/
G
/
Y
/
R
/
B
/
O
NT_006540
AC010595
87794581
3
chr5
NT_006540
AC021175
88106429
1
79971
4100
15371
99442
S
/
G
/
Y
/
R
/
B
/
O
NT_006540
AC010639
87933313
3
chr5
NT_006540
AC026414
87985817
3
27553
0
0
27553
S
/
G
/
Y
/
R
/
B
/
O
NT_006540
AC026414
87985817
3
chr5
NT_006540
AC021175
88106429
1
0
0
0
0
S
/
G
/
Y
/
R
/
B
/
O
NT_006540
AC021175
88106429
1
 
 
 
 
 
 
 
 
 
S
/
G
/
Y
/
R
/
B
/
O
NT_006540
AC021175
88106429
1
chr5
NT_006540
AC010486
87641201
3
43769
2779
0
46548
S
/
G
/
Y
/
R
/
B
/
O
NT_006540
AC021175
88106429
1
chr5
NT_006540
AC010595
87794581
3
79971
4100
15371
99442
S
/
G
/
Y
/
R
/
B
/
O
NT_006540
AC021175
88106429
1
chr5
NT_006540
AC026700
87746435
3
40881
6291
1076
48248