Home    Genome Browser    BLAT Search    Help
  Chromosome 5 - Clone Overlaps - Single Contig
 
Description of this page Main Reports Page Main Assembly Page Main Overlap Page Whole Chromosome Single Contigs

Line color code:

  • White: overlap with immediately succeeding clone
  • Green: overlap with clone in same contig
  • Pink: overlap with clone in same chromosome, different contig
  • Red: overlap with clone on different chromosome
  • Yellow: overlap with clone not used in assembly
NT_033086 NT_023089 NT_006576 NT_033103 NT_029977 NT_016779 NT_033104 NT_023110
NT_033119 NT_023097 NT_023084 NT_023115 NT_023315 NT_033112 NT_006547 NT_023162
NT_006577 NT_023114 NT_023216 NT_023124 NT_026281 NT_023085 NT_033113 NT_033110
NT_006679 NT_023195 NT_033085 NT_006702 NT_023098 NT_028188 NT_031794 NT_023102
NT_023081 NT_006693 NT_016864 NT_033115 NT_033092 NT_006665 NT_006497 NT_006431
NT_033093 NT_006790 NT_006713 NT_026283 NT_023083 NT_033077 NT_033111 NT_033079
NT_007022 NT_006540 NT_030680 NT_029973 NT_028179 NT_033118 NT_006731 NT_023148
NT_023290 NT_033094 NT_033116 NT_006654 NT_033095 NT_033098 NT_033082 NT_033096
NT_023091 NT_006789 NT_033108 NT_006899 NT_006780 NT_030685 NT_025721 NT_033106
NT_025702 NT_023192 NT_029295 NT_033097 NT_016755 NT_029975 NT_033083 NT_033084
NT_023238 NT_033105 NT_007072 NT_033091 NT_016714 NT_006859 NT_006489 NT_029289
NT_033078 NT_023269 NT_023248 NT_030691 NT_006788 NT_030698 NT_033117 NT_033080
NT_023133 NT_006907 NT_023132 NT_033089 NT_006725 NT_023093 NT_006802 NT_006932
NT_006519


  NT_023132
 
LinksContig1Acc1Start1PhsChr2Contig2Acc2Start2PhsStrong OverlapMedium OverlapWeak OverlapTotal Overlap
S/G/Y/R/B/O NT_023132AC0273091790945671chr5NT_023132AC03198717911545110000
S/G/Y/R/B/O NT_023132AC0273091790945671chr5NT_023132AC01140718073046331636602356039926
S/G/Y/R/B/O NT_023132AC0273091790945671chr5NT_023132AC02221718039775833237723061484049523
S/G/Y/R/B/O NT_023132AC0273091790945671  AC03421018039775816254415882626990401
S/G/Y/R/B/O NT_023132AC0319871791154511chr5NT_023132AC01023917912359020000
S/G/Y/R/B/O NT_023132AC0319871791154511chr5NT_023132AC1081121836865241268732446113730456
S/G/Y/R/B/O NT_023132AC0319871791154511chr5NT_023132AC113346183849240163305137851558692676
S/G/Y/R/B/O NT_023132AC0102391791235902chr5NT_023132AC00867117914928020000
S/G/Y/R/B/O NT_023132AC0102391791235902chr5NT_023132AC1164271822573713493000049300
S/G/Y/R/B/O NT_023132AC0086711791492802chr5NT_023132AC0245611792279913667734336071109
S/G/Y/R/B/O NT_023132AC0086711791492802chr5NT_023132AC0900641808716421103320010332
S/G/Y/R/B/O NT_023132AC0245611792279913chr5NT_023132AC0922711793665833164320016432
S/G/Y/R/B/O NT_023132AC0922711793665833chr5NT_023132AC1133421794067803447400044740
S/G/Y/R/B/O NT_023132AC0922711793665833  AC1163551794067801614920061492
S/G/Y/R/B/O NT_023132AC1133421794067803chr5NT_023132AC01138717950082030000
S/G/Y/R/B/O NT_023132AC1133421794067803  AC1163551793665831997160099716
S/G/Y/R/B/O NT_023132AC0113871795008203chr5NT_023132AC0114101796227373421370042137
S/G/Y/R/B/O NT_023132AC0113871795008203  AC007427179366583110590283243039117265
S/G/Y/R/B/O NT_023132AC0113871795008203  AC1163551796227371449200317248092
S/G/Y/R/B/O NT_023132AC0114101796227373chr5NT_023132AC02244017973323730000
S/G/Y/R/B/O NT_023132AC0114101796227373  AC0074275866497110060300100603
S/G/Y/R/B/O NT_023132AC0114101796227373  AC01135858664973449410044941
S/G/Y/R/B/O NT_023132AC0224401797332373chr5NT_023132AC0224261798003833505580050558
S/G/Y/R/B/O NT_023132AC0224401797332373  AC011358179500820311755500117555
S/G/Y/R/B/O NT_023132AC0224261798003833chr5NT_023132AC0114001798727323384750038475
S/G/Y/R/B/O NT_023132AC0224261798003833  AC0113581798003833981470098147
S/G/Y/R/B/O NT_023132AC0114001798727323chr5NT_023132AC0932461799927073403360040336
S/G/Y/R/B/O NT_023132AC0114001798727323  AC0113581797332373258940025894
S/G/Y/R/B/O NT_023132AC0932461799927073chr5NT_023132AC0919801800850383828210082821
S/G/Y/R/B/O NT_023132AC0932461799927073  AC0104541799927071275270027527
S/G/Y/R/B/O NT_023132AC0919801800850383chr5NT_023132AC0103061802381711201170020117
S/G/Y/R/B/O NT_023132AC0919801800850383chr5NT_033082AC0103621148729373232710023271
S/G/Y/R/B/O NT_023132AC0919801800850383  AC0104541148729371859140393089844
S/G/Y/R/B/O NT_023132AC0103061802381711chr5NT_023132AC11493618025619210000
S/G/Y/R/B/O NT_023132AC0103061802381711chr5NT_033082AC010362114872937310342717904954110171
S/G/Y/R/B/O NT_023132AC0103061802381711chr5NT_006907AC0165741788569003160830016083
S/G/Y/R/B/O NT_023132AC1149361802561921chr5NT_023132AC02221718039775830000
S/G/Y/R/B/O NT_023132AC0222171803977583chr5NT_023132AC1100111805917182632710063271
S/G/Y/R/B/O NT_023132AC0222171803977583chr5NT_023132AC0211591807282151478595357869661912
S/G/Y/R/B/O NT_023132AC0222171803977583chr5NT_023132AC02730917909456713237723061484049523
S/G/Y/R/B/O NT_023132AC0222171803977583  AC0086541821271453636260063626
S/G/Y/R/B/O NT_023132AC0222171803977583  AC03421017909456713784201848556327
S/G/Y/R/B/O NT_023132AC1100111805917182chr5NT_023132AC008429180604135199922036646136568
S/G/Y/R/B/O NT_023132AC1100111805917182chr5NT_023132AC0211591807282151840881762047456149164
S/G/Y/R/B/O NT_023132AC0084291806041351chr5NT_023132AC021159180728215139955912755248104330
S/G/Y/R/B/O NT_023132AC0084291806041351chr5NT_023132AC0083781810346293108600010860
S/G/Y/R/B/O NT_023132AC0211591807282151chr5NT_023132AC01140718073046330000
S/G/Y/R/B/O NT_023132AC0211591807282151chr5NT_023132AC0222171803977583478595357869661912
S/G/Y/R/B/O NT_023132AC0211591807282151chr5NT_023132AC1100111805917182840881762047456149164
S/G/Y/R/B/O NT_023132AC0114071807304633chr5NT_023132AC090064180871642117950099369117319
S/G/Y/R/B/O NT_023132AC0114071807304633chr5NT_023132AC02730917909456711636602356039926
S/G/Y/R/B/O NT_023132AC0114071807304633  AC0342101790945671335150452938044
S/G/Y/R/B/O NT_023132AC0900641808716421chr5NT_023132AC00837818103462930000
S/G/Y/R/B/O NT_023132AC0900641808716421chr5NT_023132AC0086711791492802103320010332
S/G/Y/R/B/O NT_023132AC0083781810346293chr5NT_023132AL6698211811617601916260091626
S/G/Y/R/B/O NT_023132AC0083781810346293chr5NT_023132AC0084291806041351108600010860
S/G/Y/R/B/O NT_023132AC0083781810346293  AC008412180730463237667223572140623
S/G/Y/R/B/O NT_023132AC0083781810346293  AC0106031802381712725790605678635
S/G/Y/R/B/O NT_023132AL6698211811617601chr5NT_023132AL6699241811803412573890057389
S/G/Y/R/B/O NT_023132AL6698211811617601  AC0084121810346292846800084680
S/G/Y/R/B/O NT_023132AL6698211811617601  AC0106031802381712231810460927790
S/G/Y/R/B/O NT_023132AL6699241811803412chr5NT_023132AC0087131812986812385160038516
S/G/Y/R/B/O NT_023132AL6699241811803412chr5NT_023132AC1067311813313782692120108270294
S/G/Y/R/B/O NT_023132AL6699241811803412  AC00841218118034126107321631268875924
S/G/Y/R/B/O NT_023132AC0087131812986812chr5NT_023132AC1067311813313782861830086183
S/G/Y/R/B/O NT_023132AC0087131812986812chr5NT_023132AC0165731813333833456690045669
S/G/Y/R/B/O NT_023132AC1067311813313782chr5NT_023132AC0165731813333833457920045792
S/G/Y/R/B/O NT_023132AC1067311813313782chr5NT_023132AL6699241811803412692120108270294
S/G/Y/R/B/O NT_023132AC0165731813333833chr5NT_023132AC00863218143389136077006077
S/G/Y/R/B/O NT_023132AC0165731813333833chr5NT_023132AC0087131812986812456690045669
S/G/Y/R/B/O NT_023132AC0086321814338913chr5NT_023132AC0086631815405013701600070160
S/G/Y/R/B/O NT_023132AC0086321814338913  AC02225918133338316559723098158890283
S/G/Y/R/B/O NT_023132AC0086631815405013chr5NT_023132AC0103391816131433341320034132
S/G/Y/R/B/O NT_023132AC0086631815405013  AC0222591816131431774511403911807103297
S/G/Y/R/B/O NT_023132AC0103391816131433chr5NT_023132AC0086741817013913683640068364
S/G/Y/R/B/O NT_023132AC0103391816131433  AC0222591817013911145090196316472
S/G/Y/R/B/O NT_023132AC0086741817013913chr5NT_023132AC0104521818114691531910053191
S/G/Y/R/B/O NT_023132AC0086741817013913chr5NT_023132AC0932751818299492115192394013913
S/G/Y/R/B/O NT_023132AC0086741817013913  AC0170431818114691647220511969841
S/G/Y/R/B/O NT_023132AC0104521818114691chr5NT_023132AC09327518182994925653002955386083
S/G/Y/R/B/O NT_023132AC0104521818114691  AC017043181701391190369171428843120926
S/G/Y/R/B/O NT_023132AC0104521818114691  AC0276091817013911348660980144667
S/G/Y/R/B/O NT_023132AC0932751818299492chr5NT_023132AC02340418195324014819501311061305
S/G/Y/R/B/O NT_023132AC0932751818299492chr5NT_023132AC0086741817013913115192394013913
S/G/Y/R/B/O NT_023132AC0932751818299492chr5NT_023132AC1134231819533853175720017572
S/G/Y/R/B/O NT_023132AC0932751818299492  AC0170431818114691964930096493
S/G/Y/R/B/O NT_023132AC0932751818299492  AC027609181953240181397244648090131933
S/G/Y/R/B/O NT_023132AC0234041819532401chr5NT_023132AC113423181953385310359100103591
S/G/Y/R/B/O NT_023132AC0234041819532401chr5NT_023132AC0087141820771392267220026722
S/G/Y/R/B/O NT_023132AC0234041819532401chr5NT_023132AC0933101820862961309090030909
S/G/Y/R/B/O NT_023132AC0234041819532401  AC02760918207713911147110732822840772
S/G/Y/R/B/O NT_023132AC0234041819532401  AC09322218207713914168662071262160514
S/G/Y/R/B/O NT_023132AC1134231819533853chr5NT_023132AC0087141820771392350865094411544295
S/G/Y/R/B/O NT_023132AC1134231819533853chr5NT_023132AC0932751818299492175720017572
S/G/Y/R/B/O NT_023132AC1134231819533853chr5NT_023132AC09331018208629615347304298496457
S/G/Y/R/B/O NT_023132AC1134231819533853  AC09322218195324013500281893745480645
S/G/Y/R/B/O NT_023132AC0087141820771392chr5NT_023132AC093310182086296112481425160127330
S/G/Y/R/B/O NT_023132AC0087141820771392chr5NT_023132AC01133318332122024604741440446865
S/G/Y/R/B/O NT_023132AC0087141820771392chr5NT_023132AC0234041819532401267220026722
S/G/Y/R/B/O NT_023132AC0087141820771392  AC0932221819532401561151087540203107193
S/G/Y/R/B/O NT_023132AC0933101820862961chr5NT_023132AC10679518212714510000
S/G/Y/R/B/O NT_023132AC0933101820862961chr5NT_023132AC0113331833212202217591782023541
S/G/Y/R/B/O NT_023132AC0933101820862961chr5NT_023132AC0234041819532401309090030909
S/G/Y/R/B/O NT_023132AC0933101820862961chr5NT_023132AC11342318195338535347304298496457
S/G/Y/R/B/O NT_023132AC0933101820862961  AC0932221819532401554541285854293122605
S/G/Y/R/B/O NT_023132AC1067951821271451chr5NT_023132AC11642718225737130000
S/G/Y/R/B/O NT_023132AC1067951821271451chr5NT_023132AC00845418248456736333501446477799
S/G/Y/R/B/O NT_023132AC1164271822573713chr5NT_023132AC0084691823189263423380042338
S/G/Y/R/B/O NT_023132AC1164271822573713chr5NT_023132AC0102391791235902493000049300
S/G/Y/R/B/O NT_023132AC1164271822573713  AC1142801791235901218800021880
S/G/Y/R/B/O NT_023132AC0084691823189263chr5NT_023132AC1085091824053233178890017889
S/G/Y/R/B/O NT_023132AC0084691823189263  AC1142801824053231836740083674
S/G/Y/R/B/O NT_023132AC1085091824053233chr5NT_023132AC00845418248456730000
S/G/Y/R/B/O NT_023132AC1085091824053233  AC1142801821271451524840052484
S/G/Y/R/B/O NT_023132AC0084541824845673chr5NT_023132AC1068251826200803509490050949
S/G/Y/R/B/O NT_023132AC0084541824845673chr5NT_023132AC10679518212714516333501446477799
S/G/Y/R/B/O NT_023132AC0084541824845673  AC1149311826200801291760029176
S/G/Y/R/B/O NT_023132AC1068251826200803chr5NT_023132AC0102411826329993353470035347
S/G/Y/R/B/O NT_023132AC0102411826329993chr5NT_023132AC0187601827405663189680018968
S/G/Y/R/B/O NT_023132AC0187601827405663chr5NT_023132AC0102191828191493172720017272
S/G/Y/R/B/O NT_023132AC0102191828191493chr5NT_023132AC0267151829471711221342228713431496
S/G/Y/R/B/O NT_023132AC0102191828191493  AB0234861826329993136200013620
S/G/Y/R/B/O NT_023132AC0102191828191493  AC09195718294717111857401518133755
S/G/Y/R/B/O NT_023132AC0267151829471711chr5NT_023132AC03420018303512835359727161481171124
S/G/Y/R/B/O NT_023132AC0267151829471711chr5NT_016779AC010491153013933154490421819667
S/G/Y/R/B/O NT_023132AC0267151829471711chr5NT_016779AC0166521500490432449053211116940980
S/G/Y/R/B/O NT_023132AC0267151829471711chr5NT_016779AC0267491517061134975925381598368280
S/G/Y/R/B/O NT_023132AC0267151829471711chr5NT_023132AC09139318306655632480927161161239137
S/G/Y/R/B/O NT_023132AC0267151829471711  AC0104341802381713105210197712498
S/G/Y/R/B/O NT_023132AC0267151829471711  AC0106271530139336037753241539381094
S/G/Y/R/B/O NT_023132AC0267151829471711  AC0166561500490432447953211116340963
S/G/Y/R/B/O NT_023132AC0267151829471711  AC025713150049041151752719884326737
S/G/Y/R/B/O NT_023132AC0267151829471711  AC026793151706111463880564052028
S/G/Y/R/B/O NT_023132AC0267151829471711  AC09195718306655613171949021592152542
S/G/Y/R/B/O NT_023132AC0267151829471711  AC0932111830665563464830777054253
S/G/Y/R/B/O NT_023132AC0342001830351283chr5NT_023132AC091393183066556311154800111548
S/G/Y/R/B/O NT_023132AC0342001830351283  AC0257131844555841717880310074888
S/G/Y/R/B/O NT_023132AC0342001830351283  AC09195718306655613855121202252863199
S/G/Y/R/B/O NT_023132AC0913931830665563chr5NT_023132AC01133318332122020000
S/G/Y/R/B/O NT_023132AC0913931830665563chr5NT_023132AC020903184455584118315113084086270485
S/G/Y/R/B/O NT_023132AC0913931830665563chr5NT_023132AC02671518294717112480927161161239137
S/G/Y/R/B/O NT_023132AC0913931830665563  AC0083991830665562539610234056301
S/G/Y/R/B/O NT_023132AC0913931830665563  AC025713184455584118037904620184999
S/G/Y/R/B/O NT_023132AC0913931830665563  AC09195718303512811716821202444443732
S/G/Y/R/B/O NT_023132AC0113331833212202chr5NT_023132AC0257521834573461548840054884
S/G/Y/R/B/O NT_023132AC0113331833212202chr5NT_023132AC00871418207713924604741440446865
S/G/Y/R/B/O NT_023132AC0113331833212202chr5NT_023132AC0933101820862961217591782023541
S/G/Y/R/B/O NT_023132AC0257521834573461chr5NT_023132AC0919631834702172837362102085838
S/G/Y/R/B/O NT_023132AC0257521834573461chr5NT_023132AC0083811835275173635810063581
S/G/Y/R/B/O NT_023132AC0257521834573461  AC01025718352751714116878681749366529
S/G/Y/R/B/O NT_023132AC0919631834702172chr5NT_023132AC0083811835275173864200086420
S/G/Y/R/B/O NT_023132AC0919631834702172chr5NT_023132AC1081041836001951797660079766
S/G/Y/R/B/O NT_023132AC0919631834702172  AC01025718352751713766355261325656445
S/G/Y/R/B/O NT_023132AC0083811835275173chr5NT_023132AC1081041836001951829980082998
S/G/Y/R/B/O NT_023132AC0083811835275173chr5NT_023132AC0257521834573461635810063581
S/G/Y/R/B/O NT_023132AC0083811835275173  AC01025718360019513386315122270058075
S/G/Y/R/B/O NT_023132AC1081041836001951chr5NT_023132AC02655218363092713156201505546617
S/G/Y/R/B/O NT_023132AC1081041836001951chr5NT_023132AC0244721836382051366650571442379
S/G/Y/R/B/O NT_023132AC1081041836001951chr5NT_023132AC0919631834702172797660079766
S/G/Y/R/B/O NT_023132AC1081041836001951  AC01025718352751715044332454102194709
S/G/Y/R/B/O NT_023132AC0265521836309271chr5NT_023132AC02447218363820515506937621040469235
S/G/Y/R/B/O NT_023132AC0265521836309271chr5NT_023132AC1081121836865241927062441119596342
S/G/Y/R/B/O NT_023132AC0265521836309271  AC0102571835275171323660102933395
S/G/Y/R/B/O NT_023132AC0244721836382051chr5NT_023132AC108112183686524191564142197665113448
S/G/Y/R/B/O NT_023132AC0244721836382051chr5NT_023132AC1081041836001951366650571442379
S/G/Y/R/B/O NT_023132AC0244721836382051  AC01025714604179413086918151432947013
S/G/Y/R/B/O NT_023132AC1081121836865241chr5NT_023132AC11334618384924010000
S/G/Y/R/B/O NT_023132AC1081121836865241chr5NT_023132AC0265521836309271927062441119596342
S/G/Y/R/B/O NT_023132AC1081121836865241chr5NT_023132AC0319871791154511268732446113730456
S/G/Y/R/B/O NT_023132AC1133461838492401chr5NT_023132AC0102201840283163256631975027638
S/G/Y/R/B/O NT_023132AC1133461838492401chr5NT_023132AC0084131840577553460880046088
S/G/Y/R/B/O NT_023132AC1133461838492401chr5NT_023132AC031987179115451163305137851558692676
S/G/Y/R/B/O NT_023132AC0102201840283163chr5NT_023132AC0084131840577553142920014292
S/G/Y/R/B/O NT_023132AC0084131840577553chr5NT_023132AC0273161841866223695410069541
S/G/Y/R/B/O NT_023132AC0084131840577553chr5NT_023132AC1133461838492401460880046088
S/G/Y/R/B/O NT_023132AC0273161841866223chr5NT_023132AC0273101842294422115060011506
S/G/Y/R/B/O NT_023132AC0273101842294422chr5NT_023132AC0086991842862353349910034991
S/G/Y/R/B/O NT_023132AC0086991842862353chr5NT_023132AC020903184455584107265681714082
S/G/Y/R/B/O NT_023132AC0086991842862353chr5NT_023132AC0900651844564011621200062120
S/G/Y/R/B/O NT_023132AC0209031844555841chr5NT_023132AC09006518445640112096037735869
S/G/Y/R/B/O NT_023132AC0209031844555841chr5NT_023132AC091393183066556318315113084086270485
S/G/Y/R/B/O NT_023132AC0209031844555841  AC00839918445640121023690754080460115
S/G/Y/R/B/O NT_023132AC0209031844555841  AC02571318428623511591360642957351550
S/G/Y/R/B/O NT_023132AC0900651844564011         
S/G/Y/R/B/O NT_023132AC0900651844564011chr5NT_023132AC0086991842862353621200062120