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  Chromosome 5 - Clone Overlaps - Single Contig
 
Description of this page Main Reports Page Main Assembly Page Main Overlap Page Whole Chromosome Single Contigs

Line color code:

  • White: overlap with immediately succeeding clone
  • Green: overlap with clone in same contig
  • Pink: overlap with clone in same chromosome, different contig
  • Red: overlap with clone on different chromosome
  • Yellow: overlap with clone not used in assembly

NT_033086 NT_023089 NT_006576 NT_033103 NT_029977 NT_016779 NT_033104 NT_023110
NT_033119 NT_023097 NT_023084 NT_023115 NT_023315 NT_033112 NT_006547 NT_023162
NT_006577 NT_023114 NT_023216 NT_023124 NT_026281 NT_023085 NT_033113 NT_033110
NT_006679 NT_023195 NT_033085 NT_006702 NT_023098 NT_028188 NT_031794 NT_023102
NT_023081 NT_006693 NT_016864 NT_033115 NT_033092 NT_006665 NT_006497 NT_006431
NT_033093 NT_006790 NT_006713 NT_026283 NT_023083 NT_033077 NT_033111 NT_033079
NT_007022 NT_006540 NT_030680 NT_029973 NT_028179 NT_033118 NT_006731 NT_023148
NT_023290 NT_033094 NT_033116 NT_006654 NT_033095 NT_033098 NT_033082 NT_033096
NT_023091 NT_006789 NT_033108 NT_006899 NT_006780 NT_030685 NT_025721 NT_033106
NT_025702 NT_023192 NT_029295 NT_033097 NT_016755 NT_029975 NT_033083 NT_033084
NT_023238 NT_033105 NT_007072 NT_033091 NT_016714 NT_006859 NT_006489 NT_029289
NT_033078 NT_023269 NT_023248 NT_030691 NT_006788 NT_030698 NT_033117 NT_033080
NT_023133 NT_006907 NT_023132 NT_033089 NT_006725 NT_023093 NT_006802 NT_006932
NT_006519


  NT_006665
 
LinksContig1Acc1Start1PhsChr2Contig2Acc2Start2PhsStrong OverlapMedium OverlapWeak OverlapTotal Overlap
S/G/Y/R/B/O NT_006665AC024429595243711chr5NT_006665AC116606595255423645430367968222
S/G/Y/R/B/O NT_006665AC024429595243711chr5NT_006665AC09410159616644315298448029519167305
S/G/Y/R/B/O NT_006665AC024429595243711  AC01926658396728211408529726587123644
S/G/Y/R/B/O NT_006665AC116606595255423chr5NT_006665AC094101596166443768030076803
S/G/Y/R/B/O NT_006665AC116606595255423chr5NT_033115AC113374586460571889650088965
S/G/Y/R/B/O NT_006665AC116606595255423  AC01926659525542219844087492107336
S/G/Y/R/B/O NT_006665AC094101596166443chr5NT_006665AC0087865980272030000
S/G/Y/R/B/O NT_006665AC094101596166443chr5NT_006665AC02442959524371115298448029519167305
S/G/Y/R/B/O NT_006665AC094101596166443  AC01926658646057213599000135990
S/G/Y/R/B/O NT_006665AC008786598027203chr5NT_006665AC0166045997401130000
S/G/Y/R/B/O NT_006665AC008786598027203  AC091847595255421495990049599
S/G/Y/R/B/O NT_006665AC008786598027203  AC0919685952554211122807985791085
S/G/Y/R/B/O NT_006665AC016604599740113chr5NT_006665AC008926600676653163880016388
S/G/Y/R/B/O NT_006665AC016604599740113  AC010391600676651933990093399
S/G/Y/R/B/O NT_006665AC016604599740113  AC016635600676653742050074205
S/G/Y/R/B/O NT_006665AC016604599740113  AC026747600676651601512898243365482
S/G/Y/R/B/O NT_006665AC016604599740113  AC0919686006766511489503189446789
S/G/Y/R/B/O NT_006665AC008926600676653chr5NT_006665AC008814601552983321200032120
S/G/Y/R/B/O NT_006665AC008926600676653chr5NT_006665AC025179602977421130860013086
S/G/Y/R/B/O NT_006665AC008926600676653  AC010391601552981402080040208
S/G/Y/R/B/O NT_006665AC008926600676653  AC0267476029774213060766751244449726
S/G/Y/R/B/O NT_006665AC008926600676653  AC0342496029774224159201654458136
S/G/Y/R/B/O NT_006665AC008814601552983chr5NT_006665AC034250602697682298920029892
S/G/Y/R/B/O NT_006665AC008814601552983chr5NT_006665AC02517960297742110821207581115793
S/G/Y/R/B/O NT_006665AC008814601552983  AC016635600676653275310027531
S/G/Y/R/B/O NT_006665AC008814601552983  AC026747602977421250370025037
S/G/Y/R/B/O NT_006665AC008814601552983  AC034249602977422956090095609
S/G/Y/R/B/O NT_006665AC034250602697682chr5NT_006665AC00853860293899112180200121802
S/G/Y/R/B/O NT_006665AC034250602697682chr5NT_006665AC01664260333653311692200116922
S/G/Y/R/B/O NT_006665AC034250602697682chr5NT_006665AC025179602977421136590013659
S/G/Y/R/B/O NT_006665AC008538602938991chr5NT_006665AC0251796029774210000
S/G/Y/R/B/O NT_006665AC008538602938991chr5NT_006665AC01664260333653318903700189037
S/G/Y/R/B/O NT_006665AC025179602977421chr5NT_006665AC0918306029889410000
S/G/Y/R/B/O NT_006665AC025179602977421chr5NT_006665AC00881460155298310821207581115793
S/G/Y/R/B/O NT_006665AC025179602977421chr5NT_006665AC008926600676653130860013086
S/G/Y/R/B/O NT_006665AC025179602977421chr5NT_006665AC034250602697682136590013659
S/G/Y/R/B/O NT_006665AC025179602977421  AC034249600676652374532161039614
S/G/Y/R/B/O NT_006665AC091830602988941chr5NT_006665AC0207336030497210000
S/G/Y/R/B/O NT_006665AC091830602988941chr5NT_006665AC091913620421051152840015284
S/G/Y/R/B/O NT_006665AC091830602988941chr5NT_006665AC109486603130561224530536127814
S/G/Y/R/B/O NT_006665AC020733603049721chr5NT_006665AC021601603093641159630131117274
S/G/Y/R/B/O NT_006665AC020733603049721chr5NT_006665AC0165916229731032313615641523239932
S/G/Y/R/B/O NT_006665AC020733603049721chr5NT_006665AC099502625785742329790032979
S/G/Y/R/B/O NT_006665AC020733603049721chr5NT_006665AC10913362424562284151156415220100935
S/G/Y/R/B/O NT_006665AC020733603049721chr5NT_006665AC10957962451240310776600107766
S/G/Y/R/B/O NT_006665AC021601603093641chr5NT_006665AC1094866031305610000
S/G/Y/R/B/O NT_006665AC021601603093641chr5NT_006665AC0995026257857429029621158724101135
S/G/Y/R/B/O NT_006665AC021601603093641chr5NT_006665AC1041136261961924901346831229365989
S/G/Y/R/B/O NT_006665AC021601603093641chr5NT_006665AC109133624245622386980131140009
S/G/Y/R/B/O NT_006665AC021601603093641chr5NT_006665AC1094706263965313535446831229352330
S/G/Y/R/B/O NT_006665AC021601603093641chr5NT_006665AC109579624512403752310131176542
S/G/Y/R/B/O NT_006665AC021601603093641  AC016435624512401322573632208637975
S/G/Y/R/B/O NT_006665AC109486603130561chr5NT_006665AC0166426033365330000
S/G/Y/R/B/O NT_006665AC109486603130561chr5NT_006665AC008818621446253112745016953129698
S/G/Y/R/B/O NT_006665AC109486603130561chr5NT_006665AC091830602988941224530536127814
S/G/Y/R/B/O NT_006665AC109486603130561  AC01660710470354034677503522081995
S/G/Y/R/B/O NT_006665AC109486603130561  AC091922620421053117488016953134441
S/G/Y/R/B/O NT_006665AC016642603336533chr5NT_006665AC0088526052301030000
S/G/Y/R/B/O NT_006665AC016642603336533chr5NT_006665AC00853860293899118903700189037
S/G/Y/R/B/O NT_006665AC016642603336533chr5NT_006665AC03425060269768211692200116922
S/G/Y/R/B/O NT_006665AC008852605230103chr5NT_006665AC008790606185453423290042329
S/G/Y/R/B/O NT_006665AC008852605230103chr5NT_006665AC034225616756382213930832929722
S/G/Y/R/B/O NT_006665AC008852605230103chr5NT_006665AC066693617375001671222066933178519
S/G/Y/R/B/O NT_006665AC008790606185453chr5NT_006665AC0221286069304630000
S/G/Y/R/B/O NT_006665AC008790606185453chr5NT_006665AC034225616756382433590839851757
S/G/Y/R/B/O NT_006665AC008790606185453chr5NT_006665AC0666936173750016838841082121593711
S/G/Y/R/B/O NT_006665AC008790606185453chr5NT_006665AC092343607061653373080037308
S/G/Y/R/B/O NT_006665AC008790606185453  AC026095605230101408570173242589
S/G/Y/R/B/O NT_006665AC022128606930463chr5NT_006665AC092343607061653340610034061
S/G/Y/R/B/O NT_006665AC022128606930463chr5NT_006665AC034225616756382341170034117
S/G/Y/R/B/O NT_006665AC022128606930463  AC026095607061651166860016686
S/G/Y/R/B/O NT_006665AC092343607061653chr5NT_006665AC008829608359163193450019345
S/G/Y/R/B/O NT_006665AC092343607061653chr5NT_006665AC008790606185453373080037308
S/G/Y/R/B/O NT_006665AC092343607061653chr5NT_006665AC066693617375001147781681853724996
S/G/Y/R/B/O NT_006665AC092343607061653  AC02609560693046113623516391825139699
S/G/Y/R/B/O NT_006665AC008829608359163chr5NT_006665AC008833609756933599040059904
S/G/Y/R/B/O NT_006665AC008829608359163  AC016600609756932325090032509
S/G/Y/R/B/O NT_006665AC008829608359163  AC016624609756932333941921035315
S/G/Y/R/B/O NT_006665AC008829608359163  AC02212560975693212812168980135019
S/G/Y/R/B/O NT_006665AC008829608359163  AC0223756097569315329525182231678129
S/G/Y/R/B/O NT_006665AC008833609756933chr5NT_006665AC0087916105768330000
S/G/Y/R/B/O NT_006665AC008833609756933  AC01660060835916212880244720133274
S/G/Y/R/B/O NT_006665AC008833609756933  AC016614608359163112510011251
S/G/Y/R/B/O NT_006665AC008833609756933  AC01662260835916311008400110084
S/G/Y/R/B/O NT_006665AC008833609756933  AC016624608359162871311921089052
S/G/Y/R/B/O NT_006665AC008833609756933  AC02097560835916210258124480105029
S/G/Y/R/B/O NT_006665AC008833609756933  AC022125608359162562076898481267917
S/G/Y/R/B/O NT_006665AC008833609756933  AC0223756083591616985825181408886464
S/G/Y/R/B/O NT_006665AC008791610576833chr5NT_006665AC07900761176379111565601304116960
S/G/Y/R/B/O NT_006665AC008791610576833  AC01661460835916310716600107166
S/G/Y/R/B/O NT_006665AC008791610576833  AC020975608359162519071920250856335
S/G/Y/R/B/O NT_006665AC079007611763791chr5NT_006665AC008804612115793261450192728072
S/G/Y/R/B/O NT_006665AC079007611763791chr5NT_006665AC027558613010831193720192821300
S/G/Y/R/B/O NT_006665AC079007611763791  AC0166001174671012136650013665
S/G/Y/R/B/O NT_006665AC079007611763791  AC016614117467101310897000108970
S/G/Y/R/B/O NT_006665AC079007611763791  AC0209241174671013251370025137
S/G/Y/R/B/O NT_006665AC079007611763791  AC0209751174671012611181921251565554
S/G/Y/R/B/O NT_006665AC008804612115793chr5NT_006665AC02755861301083111759673260124922
S/G/Y/R/B/O NT_006665AC008804612115793  AC008111881808671325310032531
S/G/Y/R/B/O NT_006665AC027558613010831chr5NT_006665AC012315613234423265610026561
S/G/Y/R/B/O NT_006665AC027558613010831chr5NT_006665AC079007611763791193720192821300
S/G/Y/R/B/O NT_006665AC027558613010831  AC008111611763791200400020040
S/G/Y/R/B/O NT_006665AC012315613234423chr5NT_006665AC027322614936583142310014231
S/G/Y/R/B/O NT_006665AC012315613234423  AC00811161176379112174200121742
S/G/Y/R/B/O NT_006665AC027322614936583chr5NT_006665AC026693616356733659990065999
S/G/Y/R/B/O NT_006665AC027322614936583chr5NT_006665AC011929616618541406480040648
S/G/Y/R/B/O NT_006665AC027322614936583chr5NT_006665AC091955618031531543550054355
S/G/Y/R/B/O NT_006665AC027322614936583  AC091863616356731178010640424205
S/G/Y/R/B/O NT_006665AC026693616356733chr5NT_006665AC011929616618541666940066694
S/G/Y/R/B/O NT_006665AC026693616356733chr5NT_006665AC091955618031531404300040430
S/G/Y/R/B/O NT_006665AC026693616356733  AC091863614936581234430639629839
S/G/Y/R/B/O NT_006665AC011929616618541chr5NT_006665AC0342256167563820000
S/G/Y/R/B/O NT_006665AC011929616618541chr5NT_006665AC027322614936583406480040648
S/G/Y/R/B/O NT_006665AC011929616618541chr5NT_006665AC034234618052493242940024294
S/G/Y/R/B/O NT_006665AC011929616618541chr5NT_006665AC091955618031531696642186427076120
S/G/Y/R/B/O NT_006665AC011929616618541  AC091863618052491422850639648681
S/G/Y/R/B/O NT_006665AC034225616756382chr5NT_006665AC0666936173750011925441082321546577
S/G/Y/R/B/O NT_006665AC034225616756382chr5NT_006665AC008790606185453433590839851757
S/G/Y/R/B/O NT_006665AC034225616756382chr5NT_006665AC008852605230103213930832929722
S/G/Y/R/B/O NT_006665AC034225616756382chr5NT_006665AC022128606930463341170034117
S/G/Y/R/B/O NT_006665AC034225616756382  AC026095606930461340940175635850
S/G/Y/R/B/O NT_006665AC066693617375001chr5NT_006665AC0919556180315310000
S/G/Y/R/B/O NT_006665AC066693617375001chr5NT_006665AC0087906061854536838841082121593711
S/G/Y/R/B/O NT_006665AC066693617375001chr5NT_006665AC008852605230103671222066933178519
S/G/Y/R/B/O NT_006665AC066693617375001chr5NT_006665AC092343607061653147781681853724996
S/G/Y/R/B/O NT_006665AC066693617375001  AC0260956069304611296901088023849
S/G/Y/R/B/O NT_006665AC091955618031531chr5NT_006665AC03423461805249338804943217711000
S/G/Y/R/B/O NT_006665AC091955618031531chr5NT_006665AC011929616618541696642186427076120
S/G/Y/R/B/O NT_006665AC091955618031531chr5NT_006665AC026693616356733404300040430
S/G/Y/R/B/O NT_006665AC091955618031531chr5NT_006665AC027322614936583543550054355
S/G/Y/R/B/O NT_006665AC091955618031531  AC091863618052491342140639540609
S/G/Y/R/B/O NT_006665AC034234618052493chr5NT_006665AC008934619255443192140019214
S/G/Y/R/B/O NT_006665AC034234618052493chr5NT_006665AC011929616618541242940024294
S/G/Y/R/B/O NT_006665AC008934619255443chr5NT_006665AC0919136204210514759618362968079112
S/G/Y/R/B/O NT_006665AC008934619255443  AC091840618052491507940050794
S/G/Y/R/B/O NT_006665AC091913620421051chr5NT_006665AC0088186214462530000
S/G/Y/R/B/O NT_006665AC091913620421051chr5NT_006665AC091830602988941152840015284
S/G/Y/R/B/O NT_006665AC091913620421051  AC091840602988941466350859455229
S/G/Y/R/B/O NT_006665AC008818621446253chr5NT_006665AC0165916229731030000
S/G/Y/R/B/O NT_006665AC008818621446253chr5NT_006665AC109486603130561112745016953129698
S/G/Y/R/B/O NT_006665AC008818621446253  AC008879603130561756050185377458
S/G/Y/R/B/O NT_006665AC008818621446253  AC01660760313056310507400105074
S/G/Y/R/B/O NT_006665AC008818621446253  AC022428603130563528000052800
S/G/Y/R/B/O NT_006665AC008818621446253  AC09192260298894314624400146244
S/G/Y/R/B/O NT_006665AC016591622973103chr5NT_006665AC109133624245622516730051673
S/G/Y/R/B/O NT_006665AC016591622973103chr5NT_006665AC0207336030497212313615641523239932
S/G/Y/R/B/O NT_006665AC016591622973103  AC008879603130561225491554113325236
S/G/Y/R/B/O NT_006665AC016591622973103  AC022428603049723521520052152
S/G/Y/R/B/O NT_006665AC109133624245622chr5NT_006665AC109579624512403901530090153
S/G/Y/R/B/O NT_006665AC109133624245622chr5NT_006665AC02073360304972184151156415220100935
S/G/Y/R/B/O NT_006665AC109133624245622chr5NT_006665AC021601603093641386980131140009
S/G/Y/R/B/O NT_006665AC109133624245622chr5NT_006665AC099502625785742471830047183
S/G/Y/R/B/O NT_006665AC109579624512403chr5NT_006665AC099502625785742497840049784
S/G/Y/R/B/O NT_006665AC109579624512403chr5NT_006665AC02073360304972110776600107766
S/G/Y/R/B/O NT_006665AC109579624512403chr5NT_006665AC021601603093641752310131176542
S/G/Y/R/B/O NT_006665AC099502625785742chr5NT_006665AC104113626196192626340062634
S/G/Y/R/B/O NT_006665AC099502625785742chr5NT_006665AC020733603049721329790032979
S/G/Y/R/B/O NT_006665AC099502625785742chr5NT_006665AC0216016030936419029621158724101135
S/G/Y/R/B/O NT_006665AC099502625785742chr5NT_006665AC022445626594583141910014191
S/G/Y/R/B/O NT_006665AC099502625785742chr5NT_006665AC109133624245622471830047183
S/G/Y/R/B/O NT_006665AC099502625785742chr5NT_006665AC109470626396531438470043847
S/G/Y/R/B/O NT_006665AC099502625785742  AC0164356242456212740636611505246119
S/G/Y/R/B/O NT_006665AC104113626196192chr5NT_006665AC109470626396531994750842100317
S/G/Y/R/B/O NT_006665AC104113626196192chr5NT_006665AC0216016030936414901346831229365989
S/G/Y/R/B/O NT_006665AC104113626196192chr5NT_006665AC0224456265945831028290841103670
S/G/Y/R/B/O NT_006665AC104113626196192chr5NT_006665AC026465630334311319503801035751
S/G/Y/R/B/O NT_006665AC104113626196192chr5NT_006665AC073546627066903398110039811
S/G/Y/R/B/O NT_006665AC104113626196192  AC01643562451240110282488537810119487
S/G/Y/R/B/O NT_006665AC109470626396531chr5NT_006665AC02244562659458314561094581109142
S/G/Y/R/B/O NT_006665AC109470626396531chr5NT_006665AC0216016030936413535446831229352330
S/G/Y/R/B/O NT_006665AC109470626396531chr5NT_006665AC026465630334311380843801286544750
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