Chromosome 8 - Clone Overlaps

Chromosome 8 - Clone Overlaps - Single Contig

Description of this page

Line color code:

White: overlap with immediately succeeding clone
Green: overlap with clone in same contig
Pink: overlap with clone in same chromosome, different contig
Red: overlap with clone on different chromosome
Yellow: overlap with clone not used in assembly

NT_008060	NT_023779	NT_023744	NT_008227	NT_023736	NT_019483	NT_008010	NT_008161
NT_015280	NT_030737	NT_023704	NT_008205	NT_008300	NT_023666	NT_033187	NT_033199
NT_007988	NT_007993	NT_030743	NT_033201	NT_007995	NT_026349	NT_033197	NT_008251
NT_008045	NT_008176	NT_017505	NT_008216	NT_023678	NT_023878	NT_017431	NT_023806
NT_023679	NT_008201	NT_023727	NT_033189	NT_023795	NT_008014	NT_008101	NT_008050
NT_008231	NT_008026	NT_023673	NT_029343	NT_033186	NT_008218	NT_023672	NT_030735
NT_023660	NT_008183	NT_008166	NT_023676	NT_023821	NT_023732	NT_008209	NT_008055
NT_008186	NT_008292	NT_007972	NT_023682	NT_008117	NT_023717	NT_008007	NT_023693
NT_008059	NT_008046	NT_008144	NT_033198	NT_008048	NT_033200	NT_023670	NT_008289
NT_023742	NT_023811	NT_031821	NT_023705	NT_023663	NT_033191	NT_033195	NT_008157
NT_023726	NT_033196	NT_008023	NT_023715	NT_030744	NT_023709	NT_030741	NT_008150
NT_025796	NT_007994	NT_028251	NT_023662	NT_033193	NT_023838	NT_008104	NT_033185
NT_027068	NT_030032	NT_033192	NT_008127	NT_033194	NT_023747	NT_023684	NT_031818

NT_030737

Links	Contig1	Acc1	Start1	Phs	Chr2	Contig2	Acc2	Start2	Phs	Strong Overlap	Medium Overlap	Weak Overlap	Total Overlap
S/G/Y/R/B/O	NT_030737	AC073490	16132732	1	chr8	NT_030737	AC025648	16134050	1	0	0	0	0
S/G/Y/R/B/O	NT_030737	AC073490	16132732	1	chr8	NT_030737	AC091162	16268786	2	148951	0	0	148951
S/G/Y/R/B/O	NT_030737	AC073490	16132732	1	chr8	NT_030737	AC105058	16146464	3	46842	0	0	46842
S/G/Y/R/B/O	NT_030737	AC025648	16134050	1	chr8	NT_030737	AC105058	16146464	3	0	0	0	0
S/G/Y/R/B/O	NT_030737	AC025648	16134050	1	chr8	NT_030737	AC024238	18285331	1	12664	8205	8509	29378
S/G/Y/R/B/O	NT_030737	AC025648	16134050	1	chr8	NT_030737	AC025062	18043809	2	38482	6702	1040	46224
S/G/Y/R/B/O	NT_030737	AC025648	16134050	1	chr8	NT_030737	AC090148	18279021	1	57106	8089	4442	69637
S/G/Y/R/B/O	NT_030737	AC105058	16146464	3	chr8	NT_030737	AC091162	16268786	2	46857	0	0	46857
S/G/Y/R/B/O	NT_030737	AC105058	16146464	3	chr8	NT_030737	AC073490	16132732	1	46842	0	0	46842
S/G/Y/R/B/O	NT_030737	AC091162	16268786	2	chr8	NT_030737	AC011586	16416967	2	0	1517	0	1517
S/G/Y/R/B/O	NT_030737	AC091162	16268786	2	chr8	NT_030737	AC073490	16132732	1	148951	0	0	148951
S/G/Y/R/B/O	NT_030737	AC011586	16416967	2	chr8	NT_030737	AC068992	16584442	3	0	0	0	0
S/G/Y/R/B/O	NT_030737	AC011586	16416967	2			AC026663	16146464	1	12082	0	0	12082
S/G/Y/R/B/O	NT_030737	AC011586	16416967	2			AC069388	16146464	1	122329	7140	19558	149027
S/G/Y/R/B/O	NT_030737	AC011586	16416967	2			AC087202	16146464	2	159259	0	0	159259
S/G/Y/R/B/O	NT_030737	AC011586	16416967	2			AC087347	16146464	1	26205	0	0	26205
S/G/Y/R/B/O	NT_030737	AC068992	16584442	3	chr8	NT_030737	AC025218	16720679	3	9495	0	0	9495
S/G/Y/R/B/O	NT_030737	AC068992	16584442	3			AC026663	16720679	1	67711	9615	34534	111860
S/G/Y/R/B/O	NT_030737	AC068992	16584442	3			AC087347	16720679	1	137565	1850	0	139415
S/G/Y/R/B/O	NT_030737	AC025218	16720679	3	chr8	NT_030737	AB020858	16833428	3	0	0	9613	9613
S/G/Y/R/B/O	NT_030737	AC025218	16720679	3			AC072058	16584442	1	52196	4303	25421	81920
S/G/Y/R/B/O	NT_030737	AB020858	16833428	3	chr8	NT_030737	AB020859	16933428	3	0	0	0	0
S/G/Y/R/B/O	NT_030737	AB020858	16833428	3			AC072058	16720679	1	28817	0	47537	76354
S/G/Y/R/B/O	NT_030737	AB020858	16833428	3			AC079193	16720679	1	28618	22689	4844	56151
S/G/Y/R/B/O	NT_030737	AB020859	16933428	3	chr8	NT_030737	AB020860	17033428	3	0	0	0	0
S/G/Y/R/B/O	NT_030737	AB020859	16933428	3			AC072058	16720679	1	11867	2446	8612	22925
S/G/Y/R/B/O	NT_030737	AB020859	16933428	3			AC079193	188147150	1	59680	8690	12698	81068
S/G/Y/R/B/O	NT_030737	AB020859	16933428	3			AC091050	188147150	2	73502	0	0	73502
S/G/Y/R/B/O	NT_030737	AB020860	17033428	3	chr8	NT_030737	AB020861	17133428	3	0	0	0	0
S/G/Y/R/B/O	NT_030737	AB020860	17033428	3			AC091050	188147150	2	65489	0	0	65489
S/G/Y/R/B/O	NT_030737	AB020861	17133428	3	chr8	NT_030737	AB020862	17233428	3	0	0	0	0
S/G/Y/R/B/O	NT_030737	AB020862	17233428	3	chr8	NT_030737	AB020863	17333428	3	0	0	0	0
S/G/Y/R/B/O	NT_030737	AB020862	17233428	3			AC016117	188147150	1	20383	0	0	20383
S/G/Y/R/B/O	NT_030737	AB020862	17233428	3			AC079187	188147150	1	40402	0	0	40402
S/G/Y/R/B/O	NT_030737	AB020862	17233428	3			AC084079	188147150	1	20890	0	0	20890
S/G/Y/R/B/O	NT_030737	AB020863	17333428	3	chr8	NT_030737	AB020864	17490337	3	0	0	0	0
S/G/Y/R/B/O	NT_030737	AB020863	17333428	3			AC016117	188147150	1	145938	0	864	146802
S/G/Y/R/B/O	NT_030737	AB020863	17333428	3			AC079187	188147150	1	109551	0	1759	111310
S/G/Y/R/B/O	NT_030737	AB020863	17333428	3			AC084079	188147150	1	76006	5444	8485	89935
S/G/Y/R/B/O	NT_030737	AB020863	17333428	3			AF165145	188147150	2	67357	0	0	67357
S/G/Y/R/B/O	NT_030737	AB020864	17490337	3	chr8	NT_030737	AB020865	17590337	3	0	0	0	0
S/G/Y/R/B/O	NT_030737	AB020864	17490337	3			AF165145	188147150	2	63299	0	0	63299
S/G/Y/R/B/O	NT_030737	AB020864	17490337	3			AF267167	188147150	1	91799	0	0	91799
S/G/Y/R/B/O	NT_030737	AB020865	17590337	3	chr8	NT_030737	AB020866	17690337	3	0	0	0	0
S/G/Y/R/B/O	NT_030737	AB020865	17590337	3			AC026854	188147150	1	24317	2645	15852	42814
S/G/Y/R/B/O	NT_030737	AB020865	17590337	3			AC087273	188147150	1	16198	0	42575	58773
S/G/Y/R/B/O	NT_030737	AB020865	17590337	3			AF267167	34689320	1	47316	0	41539	88855
S/G/Y/R/B/O	NT_030737	AB020866	17690337	3	chr8	NT_030737	AB020867	17790337	3	0	0	0	0
S/G/Y/R/B/O	NT_030737	AB020866	17690337	3	chr8	NT_008251	AC087343	34689320	2	10104	0	0	10104
S/G/Y/R/B/O	NT_030737	AB020866	17690337	3			AC026854	34689320	1	46135	2327	6146	54608
S/G/Y/R/B/O	NT_030737	AB020866	17690337	3			AC034166	34689320	1	28697	2423	32082	63202
S/G/Y/R/B/O	NT_030737	AB020867	17790337	3	chr8	NT_030737	AB020868	17890337	3	0	0	0	0
S/G/Y/R/B/O	NT_030737	AB020867	17790337	3			AC034166	23355837	1	29551	6729	20146	56426
S/G/Y/R/B/O	NT_030737	AB020867	17790337	3			AC087625	23355837	1	75421	0	16680	92101
S/G/Y/R/B/O	NT_030737	AB020868	17890337	3	chr8	NT_030737	AC025062	18043809	2	2631	0	0	2631
S/G/Y/R/B/O	NT_030737	AB020868	17890337	3			AC087625	18043809	1	10157	0	0	10157
S/G/Y/R/B/O	NT_030737	AB020868	17890337	3			AF220173	18043809	3	14235	0	0	14235
S/G/Y/R/B/O	NT_030737	AB020868	17890337	3			AF250325	18043809	3	57256	0	0	57256
S/G/Y/R/B/O	NT_030737	AC025062	18043809	2	chr8	NT_030737	AC090148	18279021	1	0	0	0	0
S/G/Y/R/B/O	NT_030737	AC025062	18043809	2	chr8	NT_030737	AC025648	16134050	1	38482	6702	1040	46224
S/G/Y/R/B/O	NT_030737	AC090148	18279021	1	chr8	NT_030737	AC024238	18285331	1	84661	8929	37970	131560
S/G/Y/R/B/O	NT_030737	AC090148	18279021	1	chr8	NT_030737	AC025648	16134050	1	57106	8089	4442	69637
S/G/Y/R/B/O	NT_030737	AC090148	18279021	1	chr8	NT_030737	AC100800	18357647	3	59043	0	0	59043
S/G/Y/R/B/O	NT_030737	AC090148	18279021	1			AC083848	16134050	1	38768	3546	7371	49685
S/G/Y/R/B/O	NT_030737	AC024238	18285331	1	chr8	NT_030737	AC100800	18357647	3	25072	0	14962	40034
S/G/Y/R/B/O	NT_030737	AC024238	18285331	1	chr8	NT_030737	AC025648	16134050	1	12664	8205	8509	29378
S/G/Y/R/B/O	NT_030737	AC100800	18357647	3	chr8	NT_030737	AC090420	18554496	3	135973	0	0	135973
S/G/Y/R/B/O	NT_030737	AC100800	18357647	3	chr8	NT_030737	AC090148	18279021	1	59043	0	0	59043
S/G/Y/R/B/O	NT_030737	AC100800	18357647	3			AC024037	18357647	1	83090	6492	10353	99935
S/G/Y/R/B/O	NT_030737	AC100800	18357647	3			AC083848	18285331	1	152746	7853	29776	190375
S/G/Y/R/B/O	NT_030737	AC100800	18357647	3			AC090105	18285331	1	31034	0	0	31034
S/G/Y/R/B/O	NT_030737	AC090420	18554496	3	chr8	NT_030737	AC087821	18635224	3	55276	0	0	55276
S/G/Y/R/B/O	NT_030737	AC090420	18554496	3	chr8	NT_030737	AC024929	18916200	1	55057	0	0	55057
S/G/Y/R/B/O	NT_030737	AC090420	18554496	3			AC024037	18554496	1	149470	12605	11716	173791
S/G/Y/R/B/O	NT_030737	AC090420	18554496	3			AC083848	18916200	1	102267	4299	16396	122962
S/G/Y/R/B/O	NT_030737	AC090420	18554496	3			AC090105	18635224	1	150718	0	0	150718
S/G/Y/R/B/O	NT_030737	AC087821	18635224	3	chr8	NT_030737	AC009884	18747717	3	40442	0	0	40442
S/G/Y/R/B/O	NT_030737	AC087821	18635224	3	chr8	NT_030737	AC024929	18916200	1	152573	8197	3850	164620
S/G/Y/R/B/O	NT_030737	AC087821	18635224	3			AC024037	18747717	1	44868	2852	3664	51384
S/G/Y/R/B/O	NT_030737	AC009884	18747717	3	chr8	NT_030737	AC027634	18868681	1	29797	0	0	29797
S/G/Y/R/B/O	NT_030737	AC009884	18747717	3	chr8	NT_030737	AC024929	18916200	1	35272	4445	0	39717
S/G/Y/R/B/O	NT_030737	AC027634	18868681	1	chr8	NT_030737	AC024929	18916200	1	0	0	0	0
S/G/Y/R/B/O	NT_030737	AC027634	18868681	1	chr8	NT_030737	AC060813	18951234	1	30528	0	29301	59829
S/G/Y/R/B/O	NT_030737	AC024929	18916200	1	chr8	NT_030737	AC060813	18951234	1	0	0	0	0
S/G/Y/R/B/O	NT_030737	AC024929	18916200	1	chr8	NT_030737	AC009884	18747717	3	35272	4445	0	39717
S/G/Y/R/B/O	NT_030737	AC024929	18916200	1	chr8	NT_030737	AC087821	18635224	3	152573	8197	3850	164620
S/G/Y/R/B/O	NT_030737	AC024929	18916200	1	chr8	NT_030737	AC090420	18554496	3	55057	0	0	55057
S/G/Y/R/B/O	NT_030737	AC024929	18916200	1			AC024037	18747717	1	15674	0	0	15674
S/G/Y/R/B/O	NT_030737	AC060813	18951234	1	chr8	NT_030737	AC068880	19056307	3	106682	0	0	106682
S/G/Y/R/B/O	NT_030737	AC060813	18951234	1	chr8	NT_030737	AC027634	18868681	1	30528	0	29301	59829
S/G/Y/R/B/O	NT_030737	AC068880	19056307	3