|
| |
Line color code:
- White: overlap with immediately succeeding clone
- Green: overlap with clone in same contig
- Pink: overlap with clone in same chromosome, different contig
- Red: overlap with clone on different chromosome
- Yellow: overlap with clone not used in assembly
| |
|
|
|
| |
| Links | Contig1 | Acc1 | Start1 | Phs | Chr2 | Contig2 | Acc2 | Start2 | Phs | Strong Overlap | Medium Overlap | Weak Overlap | Total Overlap |
| S/G/Y/R/B/O |
NT_010883 | AC091027 | 79300731 | 3 | chr18 | NT_010883 | AC021857 | 79429257 | 1 | 87711 | 0 | 0 | 87711 |
| S/G/Y/R/B/O |
NT_010883 | AC091027 | 79300731 | 3 | chr18 | NT_010883 | AC099689 | 79473759 | 1 | 47340 | 0 | 0 | 47340 |
| S/G/Y/R/B/O |
NT_010883 | AC091027 | 79300731 | 3 | chr18 | NT_010883 | AP001852 | 79512656 | 1 | 23291 | 11225 | 0 | 34516 |
| S/G/Y/R/B/O |
NT_010883 | AC021857 | 79429257 | 1 | chr18 | NT_010883 | AC099689 | 79473759 | 1 | 109162 | 0 | 11734 | 120896 |
| S/G/Y/R/B/O |
NT_010883 | AC021857 | 79429257 | 1 | chr18 | NT_010883 | AC093335 | 79563458 | 1 | 41215 | 0 | 11706 | 52921 |
| S/G/Y/R/B/O |
NT_010883 | AC021857 | 79429257 | 1 | chr18 | NT_010883 | AC105184 | 79539438 | 2 | 17455 | 0 | 11718 | 29173 |
| S/G/Y/R/B/O |
NT_010883 | AC021857 | 79429257 | 1 | chr18 | NT_010883 | AP001403 | 79653840 | 1 | 23751 | 0 | 0 | 23751 |
| S/G/Y/R/B/O |
NT_010883 | AC021857 | 79429257 | 1 | chr18 | NT_010883 | AP001852 | 79512656 | 1 | 67492 | 10011 | 4613 | 82116 |
| S/G/Y/R/B/O |
NT_010883 | AC021857 | 79429257 | 1 | chr18 | NT_010883 | AP001856 | 79653906 | 1 | 21378 | 0 | 12865 | 34243 |
| S/G/Y/R/B/O |
NT_010883 | AC099689 | 79473759 | 1 | chr18 | NT_010883 | AP001852 | 79512656 | 1 | 91482 | 14162 | 9789 | 115433 |
| S/G/Y/R/B/O |
NT_010883 | AC099689 | 79473759 | 1 | chr18 | NT_010883 | AC091027 | 79300731 | 3 | 47340 | 0 | 0 | 47340 |
| S/G/Y/R/B/O |
NT_010883 | AC099689 | 79473759 | 1 | chr18 | NT_010883 | AC093335 | 79563458 | 1 | 74697 | 0 | 8802 | 83499 |
| S/G/Y/R/B/O |
NT_010883 | AC099689 | 79473759 | 1 | chr18 | NT_010883 | AC105184 | 79539438 | 2 | 64599 | 0 | 20866 | 85465 |
| S/G/Y/R/B/O |
NT_010883 | AC099689 | 79473759 | 1 | chr18 | NT_010883 | AP001403 | 79653840 | 1 | 62255 | 0 | 1209 | 63464 |
| S/G/Y/R/B/O |
NT_010883 | AC099689 | 79473759 | 1 | chr18 | NT_010883 | AP001856 | 79653906 | 1 | 54791 | 0 | 12841 | 67632 |
| S/G/Y/R/B/O |
NT_010883 | AC099689 | 79473759 | 1 |   |   | AF347021 | 79539438 | 3 | 21008 | 0 | 0 | 21008 |
| S/G/Y/R/B/O |
NT_010883 | AP001852 | 79512656 | 1 | chr18 | NT_010883 | AC105184 | 79539438 | 2 | 52375 | 7545 | 14849 | 74769 |
| S/G/Y/R/B/O |
NT_010883 | AP001852 | 79512656 | 1 | chr18 | NT_010883 | AC021857 | 79429257 | 1 | 67492 | 10011 | 4613 | 82116 |
| S/G/Y/R/B/O |
NT_010883 | AP001852 | 79512656 | 1 | chr18 | NT_010883 | AC091027 | 79300731 | 3 | 23291 | 11225 | 0 | 34516 |
| S/G/Y/R/B/O |
NT_010883 | AP001852 | 79512656 | 1 | chr18 | NT_010883 | AC093335 | 79563458 | 1 | 59093 | 13678 | 7518 | 80289 |
| S/G/Y/R/B/O |
NT_010883 | AP001852 | 79512656 | 1 | chr18 | NT_010883 | AP001403 | 79653840 | 1 | 58613 | 11284 | 7531 | 77428 |
| S/G/Y/R/B/O |
NT_010883 | AP001852 | 79512656 | 1 | chr18 | NT_010883 | AP001856 | 79653906 | 1 | 38648 | 1571 | 2402 | 42621 |
| S/G/Y/R/B/O |
NT_010883 | AC105184 | 79539438 | 2 | chr18 | NT_010883 | AC093335 | 79563458 | 1 | 118199 | 2663 | 56574 | 177436 |
| S/G/Y/R/B/O |
NT_010883 | AC105184 | 79539438 | 2 | chr18 | NT_010883 | AC021857 | 79429257 | 1 | 17455 | 0 | 11718 | 29173 |
| S/G/Y/R/B/O |
NT_010883 | AC105184 | 79539438 | 2 | chr18 | NT_010883 | AC099689 | 79473759 | 1 | 64599 | 0 | 20866 | 85465 |
| S/G/Y/R/B/O |
NT_010883 | AC105184 | 79539438 | 2 | chr18 | NT_010883 | AP001403 | 79653840 | 1 | 48215 | 0 | 21723 | 69938 |
| S/G/Y/R/B/O |
NT_010883 | AC105184 | 79539438 | 2 | chr18 | NT_010883 | AP001856 | 79653906 | 1 | 86530 | 2706 | 4348 | 93584 |
| S/G/Y/R/B/O |
NT_010883 | AC105184 | 79539438 | 2 |   |   | AF347021 | 79473759 | 3 | 20027 | 0 | 0 | 20027 |
| S/G/Y/R/B/O |
NT_010883 | AC093335 | 79563458 | 1 | chr18 | NT_010883 | AP001403 | 79653840 | 1 | 135384 | 0 | 1408 | 136792 |
| S/G/Y/R/B/O |
NT_010883 | AC093335 | 79563458 | 1 | chr18 | NT_010883 | AC021857 | 79429257 | 1 | 41215 | 0 | 11706 | 52921 |
| S/G/Y/R/B/O |
NT_010883 | AC093335 | 79563458 | 1 | chr18 | NT_010883 | AC099689 | 79473759 | 1 | 74697 | 0 | 8802 | 83499 |
| S/G/Y/R/B/O |
NT_010883 | AC093335 | 79563458 | 1 | chr18 | NT_010883 | AP001852 | 79512656 | 1 | 59093 | 13678 | 7518 | 80289 |
| S/G/Y/R/B/O |
NT_010883 | AC093335 | 79563458 | 1 | chr18 | NT_010883 | AP001856 | 79653906 | 1 | 103965 | 5437 | 4378 | 113780 |
| S/G/Y/R/B/O |
NT_010883 | AP001403 | 79653840 | 1 | chr18 | NT_010883 | AP001856 | 79653906 | 1 | 104977 | 5782 | 2745 | 113504 |
| S/G/Y/R/B/O |
NT_010883 | AP001403 | 79653840 | 1 | chr18 | NT_010883 | AC021857 | 79429257 | 1 | 23751 | 0 | 0 | 23751 |
| S/G/Y/R/B/O |
NT_010883 | AP001403 | 79653840 | 1 | chr18 | NT_010883 | AC099689 | 79473759 | 1 | 62255 | 0 | 1209 | 63464 |
| S/G/Y/R/B/O |
NT_010883 | AP001403 | 79653840 | 1 | chr18 | NT_010883 | AC105184 | 79539438 | 2 | 48215 | 0 | 21723 | 69938 |
| S/G/Y/R/B/O |
NT_010883 | AP001403 | 79653840 | 1 | chr18 | NT_010883 | AP001852 | 79512656 | 1 | 58613 | 11284 | 7531 | 77428 |
| S/G/Y/R/B/O |
NT_010883 | AP001403 | 79653840 | 1 |   |   | AF347021 | 79539438 | 3 | 10871 | 0 | 0 | 10871 |
| S/G/Y/R/B/O |
NT_010883 | AP001856 | 79653906 | 1 |   |   |   |   |   |   |   |   |   |
| S/G/Y/R/B/O |
NT_010883 | AP001856 | 79653906 | 1 | chr18 | NT_010883 | AC021857 | 79429257 | 1 | 21378 | 0 | 12865 | 34243 |
| S/G/Y/R/B/O |
NT_010883 | AP001856 | 79653906 | 1 | chr18 | NT_010883 | AC093335 | 79563458 | 1 | 103965 | 5437 | 4378 | 113780 |
| S/G/Y/R/B/O |
NT_010883 | AP001856 | 79653906 | 1 | chr18 | NT_010883 | AC099689 | 79473759 | 1 | 54791 | 0 | 12841 | 67632 |
| S/G/Y/R/B/O |
NT_010883 | AP001856 | 79653906 | 1 | chr18 | NT_010883 | AC105184 | 79539438 | 2 | 86530 | 2706 | 4348 | 93584 |
| S/G/Y/R/B/O |
NT_010883 | AP001856 | 79653906 | 1 | chr18 | NT_010883 | AP001852 | 79512656 | 1 | 38648 | 1571 | 2402 | 42621 |
| S/G/Y/R/B/O |
NT_010883 | AP001856 | 79653906 | 1 |   |   | AF347021 | 79539438 | 3 | 11263 | 0 | 0 | 11263 |
| |
|
|
|