Chromosome 1 - Clone Overlaps

Chromosome 1 - Clone Overlaps - Single Contig

Description of this page

Line color code:

White: overlap with immediately succeeding clone
Green: overlap with clone in same contig
Pink: overlap with clone in same chromosome, different contig
Red: overlap with clone on different chromosome
Yellow: overlap with clone not used in assembly

NT_032954	NT_004350	NT_022058	NT_004321	NT_004547	NT_021917	NT_028054	NT_032970
NT_032967	NT_021937	NT_004488	NT_022041	NT_004873	NT_030584	NT_004572	NT_029218
NT_004610	NT_032979	NT_004391	NT_030571	NT_004782	NT_028053	NT_004538	NT_004511
NT_004852	NT_032963	NT_032971	NT_032972	NT_031724	NT_004386	NT_032978	NT_032977
NT_004424	NT_032976	NT_032965	NT_032973	NT_031689	NT_029223	NT_004641	NT_029865
NT_031737	NT_004636	NT_032948	NT_004464	NT_032953	NT_004483	NT_004302	NT_032960
NT_032956	NT_032974	NT_004902	NT_026943	NT_029231	NT_004658	NT_004686	NT_021979
NT_030565	NT_028050	NT_004308	NT_004623	NT_030567	NT_032957	NT_021977	NT_029860
NT_019273	NT_031697	NT_004754	NT_032961	NT_032975	NT_022052	NT_022071	NT_004434
NT_032962	NT_021907	NT_004441	NT_030577	NT_004858	NT_019291	NT_031708	NT_029226
NT_026945	NT_004982	NT_032952	NT_004668	NT_029874	NT_004487	NT_032958	NT_004599
NT_031716	NT_004671	NT_021909	NT_004416	NT_029862	NT_021905	NT_032947	NT_021877
NT_004612	NT_031718	NT_032950	NT_004525	NT_032955	NT_029863	NT_032951	NT_021953
NT_004861	NT_031696	NT_004908	NT_004559	NT_031728	NT_021973	NT_004753	NT_004433
NT_030561	NT_004836	NT_031685	NT_004771	NT_004734	NT_031700	NT_031719	NT_004536
NT_032964	NT_031732	NT_032966	NT_031730	NT_029870	NT_032969	NT_032968

NT_004302

Links	Contig1	Acc1	Start1	Phs	Chr2	Contig2	Acc2	Start2	Phs	Strong Overlap	Medium Overlap	Weak Overlap	Total Overlap
S/G/Y/R/B/O	NT_004302	AL606535	77322188	3	chr1	NT_004302	AL606463	77442002	3	2000	0	0	2000
S/G/Y/R/B/O	NT_004302	AL606463	77442002	3	chr1	NT_004302	AL391297	77599306	3	0	1993	0	1993
S/G/Y/R/B/O	NT_004302	AL391297	77599306	3	chr1	NT_004302	AC105273	77710346	1	30163	0	0	30163
S/G/Y/R/B/O	NT_004302	AL391297	77599306	3			AL133285	77710346	1	81397	0	3633	85030
S/G/Y/R/B/O	NT_004302	AC105273	77710346	1	chr1	NT_004302	AC026490	77739605	1	45622	9387	6604	61613
S/G/Y/R/B/O	NT_004302	AC105273	77710346	1			AL133285	77739605	1	26222	0	3633	29855
S/G/Y/R/B/O	NT_004302	AC026490	77739605	1	chr1	NT_004302	AL590092	77816246	3	80438	5445	1305	87188
S/G/Y/R/B/O	NT_004302	AC026490	77739605	1	chr1	NT_004302	AC091615	77848292	3	36522	5424	0	41946
S/G/Y/R/B/O	NT_004302	AL590092	77816246	3	chr1	NT_004302	AC091615	77848292	3	71890	0	0	71890
S/G/Y/R/B/O	NT_004302	AL590092	77816246	3	chr1	NT_004302	AC105269	77932618	3	35797	0	0	35797
S/G/Y/R/B/O	NT_004302	AC091615	77848292	3	chr1	NT_004302	AC105269	77932618	3	48215	0	0	48215
S/G/Y/R/B/O	NT_004302	AC091615	77848292	3	chr1	NT_004302	AC026490	77739605	1	36522	5424	0	41946
S/G/Y/R/B/O	NT_004302	AC105269	77932618	3	chr1	NT_004302	AL591463	78005179	3	69957	0	0	69957
S/G/Y/R/B/O	NT_004302	AC105269	77932618	3	chr1	NT_004302	AL590092	77816246	3	35797	0	0	35797
S/G/Y/R/B/O	NT_004302	AL591463	78005179	3	chr1	NT_004302	AL359200	78121850	3	0	1999	0	1999
S/G/Y/R/B/O	NT_004302	AL591463	78005179	3			AL357852	77932618	1	33260	0	13639	46899
S/G/Y/R/B/O	NT_004302	AL359200	78121850	3	chr1	NT_004302	AC090530	78183789	1	2059	0	0	2059
S/G/Y/R/B/O	NT_004302	AL359200	78121850	3			AL357852	78183789	1	15661	18543	8606	42810
S/G/Y/R/B/O	NT_004302	AC090530	78183789	1	chr1	NT_004302	AC023198	78239236	1	62342	4202	0	66544
S/G/Y/R/B/O	NT_004302	AC090530	78183789	1	chr1	NT_004302	AL359205	78248117	3	96150	0	0	96150
S/G/Y/R/B/O	NT_004302	AC090530	78183789	1			AL357852	78239236	1	24850	4389	6444	35683
S/G/Y/R/B/O	NT_004302	AC023198	78239236	1	chr1	NT_004302	AL359205	78248117	3	156602	4202	8410	169214
S/G/Y/R/B/O	NT_004302	AC023198	78239236	1	chr1	NT_004302	AC098692	78417551	3	76228	1909	4605	82742
S/G/Y/R/B/O	NT_004302	AL359205	78248117	3	chr1	NT_004302	AC098692	78417551	3	92163	0	0	92163
S/G/Y/R/B/O	NT_004302	AL359205	78248117	3	chr1	NT_004302	AC090530	78183789	1	96150	0	0	96150
S/G/Y/R/B/O	NT_004302	AC098692	78417551	3	chr1	NT_004302	AL354708	78491553	1	55354	0	0	55354
S/G/Y/R/B/O	NT_004302	AC098692	78417551	3	chr1	NT_004302	AC018404	78521488	1	30989	0	0	30989
S/G/Y/R/B/O	NT_004302	AC098692	78417551	3	chr1	NT_004302	AC023198	78239236	1	76228	1909	4605	82742
S/G/Y/R/B/O	NT_004302	AL354708	78491553	1	chr1	NT_004302	AC018404	78521488	1	102397	0	0	102397
S/G/Y/R/B/O	NT_004302	AL354708	78491553	1	chr1	NT_004302	AC093158	78595035	3	60406	0	0	60406
S/G/Y/R/B/O	NT_004302	AC018404	78521488	1	chr1	NT_004302	AC093158	78595035	3	91451	0	0	91451
S/G/Y/R/B/O	NT_004302	AC018404	78521488	1	chr1	NT_004302	AC098692	78417551	3	30989	0	0	30989
S/G/Y/R/B/O	NT_004302	AC093158	78595035	3	chr1	NT_004302	AC105271	78683165	1	40466	0	0	40466
S/G/Y/R/B/O	NT_004302	AC093158	78595035	3	chr1	NT_004302	AC073887	78686092	1	52130	15615	9987	77732
S/G/Y/R/B/O	NT_004302	AC093158	78595035	3	chr1	NT_004302	AL354708	78491553	1	60406	0	0	60406
S/G/Y/R/B/O	NT_004302	AC093158	78595035	3			AC105274	78683165	1	28170	0	0	28170
S/G/Y/R/B/O	NT_004302	AC105271	78683165	1	chr1	NT_004302	AC073887	78686092	1	52073	1774	10516	64363
S/G/Y/R/B/O	NT_004302	AC105271	78683165	1	chr1	NT_004302	AC058795	79069612	1	63928	1834	15768	81530
S/G/Y/R/B/O	NT_004302	AC105271	78683165	1			AC105274	78595035	1	19070	3577	0	22647
S/G/Y/R/B/O	NT_004302	AC073887	78686092	1	chr1	NT_004302	AC013557	78697222	1	0	0	0	0
S/G/Y/R/B/O	NT_004302	AC073887	78686092	1	chr1	NT_004302	AC058795	79069612	1	15245	1836	3585	20666
S/G/Y/R/B/O	NT_004302	AC073887	78686092	1	chr1	NT_004302	AC093158	78595035	3	52130	15615	9987	77732
S/G/Y/R/B/O	NT_004302	AC013557	78697222	1	chr1	NT_004302	AC019177	78779904	1	127507	4722	10762	142991
S/G/Y/R/B/O	NT_004302	AC013557	78697222	1	chr1	NT_004686	AC073301	91832511	1	91029	0	1092	92121
S/G/Y/R/B/O	NT_004302	AC013557	78697222	1	chr1	NT_004686	AC098690	92810115	1	23277	0	1748	25025
S/G/Y/R/B/O	NT_004302	AC013557	78697222	1	chr1	NT_004302	AC098691	78792747	1	64546	0	19277	83823
S/G/Y/R/B/O	NT_004302	AC013557	78697222	1	chr1	NT_004302	AL355871	78845437	3	29713	0	0	29713
S/G/Y/R/B/O	NT_004302	AC013557	78697222	1			AL356236	78845437	1	77878	2168	3423	83469
S/G/Y/R/B/O	NT_004302	AC019177	78779904	1	chr1	NT_004302	AC098691	78792747	1	105403	1825	4246	111474
S/G/Y/R/B/O	NT_004302	AC019177	78779904	1	chr1	NT_004302	AC027623	79039789	1	10371	0	7434	17805
S/G/Y/R/B/O	NT_004302	AC019177	78779904	1	chr1	NT_004686	AC073301	91832511	1	17825	844	6635	25304
S/G/Y/R/B/O	NT_004302	AC019177	78779904	1	chr1	NT_004686	AC098690	92810115	1	10005	0	0	10005
S/G/Y/R/B/O	NT_004302	AC019177	78779904	1	chr1	NT_004302	AL355871	78845437	3	53411	1825	4246	59482
S/G/Y/R/B/O	NT_004302	AC019177	78779904	1			AL356236	78845437	1	26694	0	3388	30082
S/G/Y/R/B/O	NT_004302	AC098691	78792747	1	chr1	NT_004302	AL355871	78845437	3	90245	0	22410	112655
S/G/Y/R/B/O	NT_004302	AC098691	78792747	1	chr1	NT_004302	AC013557	78697222	1	64546	0	19277	83823
S/G/Y/R/B/O	NT_004302	AC098691	78792747	1	chr1	NT_004302	AC027623	79039789	1	35720	4640	39754	80114
S/G/Y/R/B/O	NT_004302	AC098691	78792747	1	chr1	NT_004302	AC034169	79042765	1	33059	0	10487	43546
S/G/Y/R/B/O	NT_004302	AC098691	78792747	1			AL512381	78845437	1	16086	0	0	16086
S/G/Y/R/B/O	NT_004302	AL355871	78845437	3	chr1	NT_004302	AC021075	78980943	3	19057	0	0	19057
S/G/Y/R/B/O	NT_004302	AL355871	78845437	3	chr1	NT_004302	AC013557	78697222	1	29713	0	0	29713
S/G/Y/R/B/O	NT_004302	AL355871	78845437	3	chr1	NT_004302	AC019177	78779904	1	53411	1825	4246	59482
S/G/Y/R/B/O	NT_004302	AL355871	78845437	3	chr1	NT_004302	AC027623	79039789	1	79143	8245	32983	120371
S/G/Y/R/B/O	NT_004302	AL355871	78845437	3	chr1	NT_004302	AC034169	79042765	1	75631	13830	17346	106807
S/G/Y/R/B/O	NT_004302	AL355871	78845437	3	chr1	NT_004302	AL714022	79044040	1	59953	2435	0	62388
S/G/Y/R/B/O	NT_004302	AL355871	78845437	3			AL512381	78792747	1	27892	0	0	27892
S/G/Y/R/B/O	NT_004302	AC021075	78980943	3	chr1	NT_004302	AC027623	79039789	1	37760	3374	6913	48047
S/G/Y/R/B/O	NT_004302	AC021075	78980943	3	chr1	NT_004302	AC034169	79042765	1	33583	1631	14872	50086
S/G/Y/R/B/O	NT_004302	AC021075	78980943	3	chr1	NT_004302	AL714022	79044040	1	46772	1992	0	48764
S/G/Y/R/B/O	NT_004302	AC021075	78980943	3			AL512381	78845437	1	63631	0	0	63631
S/G/Y/R/B/O	NT_004302	AC027623	79039789	1	chr1	NT_004302	AC034169	79042765	1	36442	10507	7908	54857
S/G/Y/R/B/O	NT_004302	AC027623	79039789	1	chr1	NT_004302	AC019177	78779904	1	10371	0	7434	17805
S/G/Y/R/B/O	NT_004302	AC027623	79039789	1	chr1	NT_004302	AC098691	78792747	1	35720	4640	39754	80114
S/G/Y/R/B/O	NT_004302	AC027623	79039789	1	chr1	NT_004302	AL355871	78845437	3	79143	8245	32983	120371
S/G/Y/R/B/O	NT_004302	AC027623	79039789	1	chr1	NT_004302	AL714022	79044040	1	25221	8011	20161	53393
S/G/Y/R/B/O	NT_004302	AC027623	79039789	1			AL512381	78845437	1	53715	3374	17469	74558
S/G/Y/R/B/O	NT_004302	AC034169	79042765	1	chr1	NT_004302	AL714022	79044040	1	21864	9286	10174	41324
S/G/Y/R/B/O	NT_004302	AC034169	79042765	1	chr1	NT_004302	AC021075	78980943	3	33583	1631	14872	50086
S/G/Y/R/B/O	NT_004302	AC034169	79042765	1	chr1	NT_004302	AC098691	78792747	1	33059	0	10487	43546
S/G/Y/R/B/O	NT_004302	AC034169	79042765	1	chr1	NT_004302	AL355871	78845437	3	75631	13830	17346	106807
S/G/Y/R/B/O	NT_004302	AC034169	79042765	1			AL512381	78845437	1	70002	4067	16230	90299
S/G/Y/R/B/O	NT_004302	AL714022	79044040	1	chr1	NT_004302	AC058795	79069612	1	0	0	0	0
S/G/Y/R/B/O	NT_004302	AL714022	79044040	1	chr1	NT_004302	AC021075	78980943	3	46772	1992	0	48764
S/G/Y/R/B/O	NT_004302	AL714022	79044040	1	chr1	NT_004302	AC027623	79039789	1	25221	8011	20161	53393
S/G/Y/R/B/O	NT_004302	AL714022	79044040	1	chr1	NT_004302	AC099334	79578491	3	27184	0	0	27184
S/G/Y/R/B/O	NT_004302	AL714022	79044040	1	chr1	NT_004302	AL355871	78845437	3	59953	2435	0	62388
S/G/Y/R/B/O	NT_004302	AL714022	79044040	1			AL512381	78845437	1	114376	1992	0	116368
S/G/Y/R/B/O	NT_004302	AC058795	79069612	1	chr1	NT_004302	AC015897	79156197	1	66078	4264	0	70342
S/G/Y/R/B/O	NT_004302	AC058795	79069612	1	chr1	NT_004302	AC019284	79188067	1	65963	2477	1920	70360
S/G/Y/R/B/O	NT_004302	AC058795	79069612	1	chr1	NT_004302	AC073887	78686092	1	15245	1836	3585	20666
S/G/Y/R/B/O	NT_004302	AC058795	79069612	1	chr1	NT_004302	AC096950	79274391	3	23109	0	0	23109
S/G/Y/R/B/O	NT_004302	AC058795	79069612	1	chr1	NT_004302	AC105271	78683165	1	63928	1834	15768	81530
S/G/Y/R/B/O	NT_004302	AC015897	79156197	1	chr1	NT_004302	AC019284	79188067	1	132454	0	0	132454
S/G/Y/R/B/O	NT_004302	AC015897	79156197	1	chr1	NT_004302	AC009418	79318433	1	45835	1787	0	47622
S/G/Y/R/B/O	NT_004302	AC015897	79156197	1	chr1	NT_004302	AC096950	79274391	3	69699	0	0	69699
S/G/Y/R/B/O	NT_004302	AC019284	79188067	1	chr1	NT_004302	AC096950	79274391	3	114586	0	0	114586
S/G/Y/R/B/O	NT_004302	AC019284	79188067	1	chr1	NT_004302	AC009418	79318433	1	55264	1787	0	57051
S/G/Y/R/B/O	NT_004302	AC019284	79188067	1	chr1	NT_004302	AC058795	79069612	1	65963	2477	1920	70360
S/G/Y/R/B/O	NT_004302	AC096950	79274391	3	chr1	NT_004302	AC009418	79318433	1	68719	0	0	68719
S/G/Y/R/B/O	NT_004302	AC096950	79274391	3	chr1	NT_004302	AC015897	79156197	1	69699	0	0	69699
S/G/Y/R/B/O	NT_004302	AC096950	79274391	3	chr1	NT_004302	AC058795	79069612	1	23109	0	0	23109
S/G/Y/R/B/O	NT_004302	AC009418	79318433	1	chr1	NT_004302	AL359969	79335758	1	56827	0	0	56827
S/G/Y/R/B/O	NT_004302	AC009418	79318433	1	chr1	NT_004302	AC015897	79156197	1	45835	1787	0	47622
S/G/Y/R/B/O	NT_004302	AC009418	79318433	1	chr1	NT_004302	AC019284	79188067	1	55264	1787	0	57051
S/G/Y/R/B/O	NT_004302	AC009418	79318433	1	chr1	NT_004302	AC091611	79349463	3	56008	0	0	56008
S/G/Y/R/B/O	NT_004302	AL359969	79335758	1	chr1	NT_004302	AC091611	79349463	3	144655	0	0	144655
S/G/Y/R/B/O	NT_004302	AL359969	79335758	1			AL390740	79349463	1	54811	0	22388	77199
S/G/Y/R/B/O	NT_004302	AC091611	79349463	3	chr1	NT_004302	AC099334	79578491	3	0	0	0	0
S/G/Y/R/B/O	NT_004302	AC091611	79349463	3	chr1	NT_004302	AC009418	79318433	1	56008	0	0	56008
S/G/Y/R/B/O	NT_004302	AC091611	79349463	3	chr1	NT_004302	AL355573	79999507	1	48048	4181	0	52229
S/G/Y/R/B/O	NT_004302	AC091611	79349463	3			AL390740	79335758	1	116805	0	5148	121953
S/G/Y/R/B/O	NT_004302	AC099334	79578491	3	chr1	NT_004302	AL445992	79657503	3	0	0	0	0
S/G/Y/R/B/O	NT_004302	AC099334	79578491	3	chr1	NT_004302	AC024195	79820879	1	15362	0	0	15362
S/G/Y/R/B/O	NT_004302	AC099334	79578491	3	chr1	NT_004302	AL714022	79044040	1	27184	0	0	27184
S/G/Y/R/B/O	NT_004302	AC099334	79578491	3			AC105274	79820879	1	23516	4651	0	28167
S/G/Y/R/B/O	NT_004302	AL445992	79657503	3	chr1	NT_004302	AL162263	79691828	3	0	0	0	0
S/G/Y/R/B/O	NT_004302	AL445992	79657503	3	chr1	NT_004302	AC024195	79820879	1	33980	0	0	33980
S/G/Y/R/B/O	NT_004302	AL162263	79691828	3	chr1	NT_004302	AL390780	79761783	3	0	0	0	0
S/G/Y/R/B/O	NT_004302	AL162263	79691828	3	chr1	NT_004302	AC024195	79820879	1	70350	0	0	70350
S/G/Y/R/B/O	NT_004302	AL162263	79691828	3			AL590555	79820879	1	48095	0	23895	71990
S/G/Y/R/B/O	NT_004302	AL390780	79761783	3	chr1	NT_004302	AC024195	79820879	1	60870	0	0	60870
S/G/Y/R/B/O	NT_004302	AC024195	79820879	1	chr1	NT_004302	AC114486	79825952	1	3456	5240	3455	12151
S/G/Y/R/B/O	NT_004302	AC024195	79820879	1	chr1	NT_004302	AC099334	79578491	3	15362	0	0	15362
S/G/Y/R/B/O	NT_004302	AC024195	79820879	1	chr1	NT_004302	AL162263	79691828	3	70350	0	0	70350
S/G/Y/R/B/O	NT_004302	AC024195	79820879	1	chr1	NT_004302	AL445992	79657503	3	33980	0	0	33980
S/G/Y/R/B/O	NT_004302	AC024195	79820879	1			AL590555	79657503	1	46552	0	0	46552
S/G/Y/R/B/O	NT_004302	AC114486	79825952	1	chr1	NT_004302	AL355573	79999507	1	0	0	0	0
S/G/Y/R/B/O	NT_004302	AL355573	79999507	1	chr1	NT_004302	AC023379	80027300	1	18078	2402	0	20480
S/G/Y/R/B/O	NT_004302	AL355573	79999507	1	chr1	NT_004302	AC073499	80251532	1	18088	0	10848	28936
S/G/Y/R/B/O	NT_004302	AL355573	79999507	1	chr1	NT_004302	AC091611	79349463	3	48048	4181	0	52229
S/G/Y/R/B/O	NT_004302	AL355573	79999507	1	chr1	NT_004302	AC099786	80065791	3	41350	2522	0	43872
S/G/Y/R/B/O	NT_004302	AL355573	79999507	1			AC021697	79761783	1	30041	1089	0	31130
S/G/Y/R/B/O	NT_004302	AL355573	79999507	1			AL390740	80065791	1	13142	1686	0	14828
S/G/Y/R/B/O	NT_004302	AC023379	80027300	1	chr1	NT_004302	AC099786	80065791	3	137056	7027	2040	146123
S/G/Y/R/B/O	NT_004302	AC023379	80027300	1	chr1	NT_004302	AC073499	80251532	1	84698	4136	2040	90874
S/G/Y/R/B/O	NT_004302	AC023379	80027300	1	chr1	NT_004302	AL357732	80244693	1	15441	0	5991	21432
S/G/Y/R/B/O	NT_004302	AC023379	80027300	1			AC021697	45469670	1	34882	0	1253	36135
S/G/Y/R/B/O	NT_004302	AC099786	80065791	3	chr1	NT_004302	AL357732	80244693	1	46965	0	5993	52958
S/G/Y/R/B/O	NT_004302	AC099786	80065791	3	chr1	NT_004302	AC073499	80251532	1	127150	0	27196	154346
S/G/Y/R/B/O	NT_004302	AC099786	80065791	3	chr1	NT_004302	AL355573	79999507	1	41350	2522	0	43872
S/G/Y/R/B/O	NT_004302	AC099786	80065791	3			AB050476	80244693	3	11853	0	0	11853
S/G/Y/R/B/O	NT_004302	AC099786	80065791	3			AC021697	80244693	1	122147	0	1212	123359
S/G/Y/R/B/O	NT_004302	AL357732	80244693	1	chr1	NT_004302	AC073499	80251532	1	62839	0	16199	79038
S/G/Y/R/B/O	NT_004302	AL357732	80244693	1	chr1	NT_004302	AC023379	80027300	1	15441	0	5991	21432
S/G/Y/R/B/O	NT_004302	AL357732	80244693	1	chr1	NT_004302	AC027384	80374213	1	43290	0	0	43290
S/G/Y/R/B/O	NT_004302	AL357732	80244693	1	chr1	NT_004302	AC107627	80283147	3	54390	0	0	54390
S/G/Y/R/B/O	NT_004302	AL357732	80244693	1			AL356429	27013232	1	17499	2138	4604	24241
S/G/Y/R/B/O	NT_004302	AC073499	80251532	1	chr1	NT_004302	AC107627	80283147	3	0	0	0	0
S/G/Y/R/B/O	NT_004302	AC073499	80251532	1	chr1	NT_004302	AC023379	80027300	1	84698	4136	2040	90874
S/G/Y/R/B/O	NT_004302	AC073499	80251532	1	chr1	NT_004302	AC027384	80374213	1	18634	0	0	18634
S/G/Y/R/B/O	NT_004302	AC073499	80251532	1	chr1	NT_004302	AC099786	80065791	3	127150	0	27196	154346
S/G/Y/R/B/O	NT_004302	AC073499	80251532	1	chr1	NT_004302	AL355573	79999507	1	18088	0	10848	28936
S/G/Y/R/B/O	NT_004302	AC073499	80251532	1			AB050476	27013232	3	11853	0	0	11853
S/G/Y/R/B/O	NT_004302	AC073499	80251532	1			AC021697	27013232	1	59703	0	1790	61493
S/G/Y/R/B/O	NT_004302	AC073499	80251532	1			AL356429	79999507	1	27678	0	3524	31202
S/G/Y/R/B/O	NT_004302	AC107627	80283147	3	chr1	NT_004302	AC053498	80346025	1	26614	0	0	26614
S/G/Y/R/B/O	NT_004302	AC107627	80283147	3	chr1	NT_004302	AC027384	80374213	1	75737	0	0	75737
S/G/Y/R/B/O	NT_004302	AC107627	80283147	3	chr1	NT_004302	AL357732	80244693	1	54390	0	0	54390
S/G/Y/R/B/O	NT_004302	AC107627	80283147	3			AL356429	27013232	1	25964	7184	6368	39516
S/G/Y/R/B/O	NT_004302	AC053498	80346025	1	chr1	NT_004302	AC027384	80374213	1	52097	0	16544	68641
S/G/Y/R/B/O	NT_004302	AC053498	80346025	1	chr1	NT_004302	AC093156	80416284	3	57865	0	3596	61461
S/G/Y/R/B/O	NT_004302	AC053498	80346025	1			AL356429	80283147	1	10725	14950	0	25675
S/G/Y/R/B/O	NT_004302	AC027384	80374213	1	chr1	NT_004302	AC093156	80416284	3	0	0	0	0
S/G/Y/R/B/O	NT_004302	AC027384	80374213	1	chr1	NT_004302	AC073499	80251532	1	18634	0	0	18634
S/G/Y/R/B/O	NT_004302	AC027384	80374213	1	chr1	NT_004302	AC107627	80283147	3	75737	0	0	75737
S/G/Y/R/B/O	NT_004302	AC027384	80374213	1	chr1	NT_004302	AL357732	80244693	1	43290	0	0	43290
S/G/Y/R/B/O	NT_004302	AC027384	80374213	1			AL356429	27013232	1	28778	14563	4324	47665
S/G/Y/R/B/O	NT_004302	AC093156	80416284	3	chr1	NT_004302	AL096829	80615130	3	21789	0	0	21789
S/G/Y/R/B/O	NT_004302	AC093156	80416284	3	chr1	NT_004302	AC053498	80346025	1	57865	0	3596	61461
S/G/Y/R/B/O	NT_004302	AC093156	80416284	3			AL354667	80615130	1	51383	2723	0	54106
S/G/Y/R/B/O	NT_004302	AL096829	80615130	3	chr1	NT_004302	AL137803	80729268	3	0	0	0	0
S/G/Y/R/B/O	NT_004302	AL096829	80615130	3			AL354667	80416284	1	103507	5332	16292	125131
S/G/Y/R/B/O	NT_004302	AL137803	80729268	3	chr1	NT_004302	AL357314	80786983	3	2000	0	0	2000
S/G/Y/R/B/O	NT_004302	AL137803	80729268	3			AL354667	80416284	1	21856	4135	2729	28720
S/G/Y/R/B/O	NT_004302	AL137803	80729268	3			AL359206	80786983	1	27830	0	0	27830
S/G/Y/R/B/O	NT_004302	AL137803	80729268	3			AL592082	80786983	1	42510	0	0	42510
S/G/Y/R/B/O	NT_004302	AL357314	80786983	3	chr1	NT_004302	AL445464	80896549	3	0	0	0	0
S/G/Y/R/B/O	NT_004302	AL357314	80786983	3			AC009337	80786983	1	64528	6082	0	70610
S/G/Y/R/B/O	NT_004302	AL357314	80786983	3			AC025147	80786983	1	18202	0	0	18202
S/G/Y/R/B/O	NT_004302	AL357314	80786983	3			AL359206	80729268	1	65858	2847	0	68705
S/G/Y/R/B/O	NT_004302	AL445464	80896549	3	chr1	NT_004302	AC092813	80997646	3	0	0	0	0
S/G/Y/R/B/O	NT_004302	AL445464	80896549	3			AC009337	80729268	1	53887	0	0	53887
S/G/Y/R/B/O	NT_004302	AL445464	80896549	3			AC025147	80729268	1	100979	0	0	100979
S/G/Y/R/B/O	NT_004302	AL445464	80896549	3			AL356979	80729268	1	10601	0	0	10601
S/G/Y/R/B/O	NT_004302	AL445464	80896549	3			AL359206	80729268	1	10178	5508	6692	22378
S/G/Y/R/B/O	NT_004302	AC092813	80997646	3	chr1	NT_004302	AC012517	81178175	1	100448	0	54534	154982
S/G/Y/R/B/O	NT_004302	AC092813	80997646	3			AC023917	81178175	1	13034	1495	1828	16357
S/G/Y/R/B/O	NT_004302	AC092813	80997646	3			AC025147	81178175	1	19558	0	0	19558
S/G/Y/R/B/O	NT_004302	AC092813	80997646	3			AC079307	81178175	1	27768	0	0	27768
S/G/Y/R/B/O	NT_004302	AC092813	80997646	3			AL356979	81178175	1	109830	5080	3004	117914
S/G/Y/R/B/O	NT_004302	AC092813	80997646	3			AL391624	81178175	1	130172	5519	0	135691
S/G/Y/R/B/O	NT_004302	AC012517	81178175	1
S/G/Y/R/B/O	NT_004302	AC012517	81178175	1	chr1	NT_032953	AC094023	73184611	1	50914	0	1130	52044
S/G/Y/R/B/O	NT_004302	AC012517	81178175	1	chr1	NT_032953	AL596217	73307296	2	38438	0	0	38438
S/G/Y/R/B/O	NT_004302	AC012517	81178175	1			AC023917	81178175	1	25824	1495	5524	32843
S/G/Y/R/B/O	NT_004302	AC012517	81178175	1			AC079307	81178175	1	27761	0	0	27761
S/G/Y/R/B/O	NT_004302	AC012517	81178175	1			AL356979	73184611	1	81392	6318	3004	90714
S/G/Y/R/B/O	NT_004302	AC012517	81178175	1			AL391624	73184611	1	87812	5521	0	93333