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  Chromosome 1 - Clone Overlaps - Single Contig
 
Description of this page Main Reports Page Main Assembly Page Main Overlap Page Whole Chromosome Single Contigs

Line color code:

  • White: overlap with immediately succeeding clone
  • Green: overlap with clone in same contig
  • Pink: overlap with clone in same chromosome, different contig
  • Red: overlap with clone on different chromosome
  • Yellow: overlap with clone not used in assembly
NT_032954 NT_004350 NT_022058 NT_004321 NT_004547 NT_021917 NT_028054 NT_032970
NT_032967 NT_021937 NT_004488 NT_022041 NT_004873 NT_030584 NT_004572 NT_029218
NT_004610 NT_032979 NT_004391 NT_030571 NT_004782 NT_028053 NT_004538 NT_004511
NT_004852 NT_032963 NT_032971 NT_032972 NT_031724 NT_004386 NT_032978 NT_032977
NT_004424 NT_032976 NT_032965 NT_032973 NT_031689 NT_029223 NT_004641 NT_029865
NT_031737 NT_004636 NT_032948 NT_004464 NT_032953 NT_004483 NT_004302 NT_032960
NT_032956 NT_032974 NT_004902 NT_026943 NT_029231 NT_004658 NT_004686 NT_021979
NT_030565 NT_028050 NT_004308 NT_004623 NT_030567 NT_032957 NT_021977 NT_029860
NT_019273 NT_031697 NT_004754 NT_032961 NT_032975 NT_022052 NT_022071 NT_004434
NT_032962 NT_021907 NT_004441 NT_030577 NT_004858 NT_019291 NT_031708 NT_029226
NT_026945 NT_004982 NT_032952 NT_004668 NT_029874 NT_004487 NT_032958 NT_004599
NT_031716 NT_004671 NT_021909 NT_004416 NT_029862 NT_021905 NT_032947 NT_021877
NT_004612 NT_031718 NT_032950 NT_004525 NT_032955 NT_029863 NT_032951 NT_021953
NT_004861 NT_031696 NT_004908 NT_004559 NT_031728 NT_021973 NT_004753 NT_004433
NT_030561 NT_004836 NT_031685 NT_004771 NT_004734 NT_031700 NT_031719 NT_004536
NT_032964 NT_031732 NT_032966 NT_031730 NT_029870 NT_032969 NT_032968


  NT_029223
 
LinksContig1Acc1Start1PhsChr2Contig2Acc2Start2PhsStrong OverlapMedium OverlapWeak OverlapTotal Overlap
S/G/Y/R/B/O NT_029223AL080278567986563chr1NT_029223AL1392195690316930000
S/G/Y/R/B/O NT_029223AL080278567986563  AC009278565390101119760011976
S/G/Y/R/B/O NT_029223AL080278567986563  AC027234565390101793892441147283302
S/G/Y/R/B/O NT_029223AL080278567986563  AL138779565390101131770013177
S/G/Y/R/B/O NT_029223AL080278567986563  AL157907565390101491002612051712
S/G/Y/R/B/O NT_029223AL080278567986563  AL354883565390101765300076530
S/G/Y/R/B/O NT_029223AL139219569031693chr1NT_029223AL3902435696792430000
S/G/Y/R/B/O NT_029223AL139219569031693  AC009278565390101613400240263742
S/G/Y/R/B/O NT_029223AL139219569031693  AC027234565390101499532116246854537
S/G/Y/R/B/O NT_029223AL390243569679243chr1NT_029223AL3550045705051930199801998
S/G/Y/R/B/O NT_029223AL390243569679243  AC009278565390101844370084437
S/G/Y/R/B/O NT_029223AL390243569679243  AC027234565390101237740221825992
S/G/Y/R/B/O NT_029223AL355004570505193chr1NT_029223AL4422235706512832000002000
S/G/Y/R/B/O NT_029223AL355004570505193  AC009278570505191145690014569
S/G/Y/R/B/O NT_029223AL442223570651283chr1NT_029223AL3597395711781130199701997
S/G/Y/R/B/O NT_029223AL359739571178113chr1NT_029223AL6630855728609532000002000
S/G/Y/R/B/O NT_029223AL663085572860953chr1NT_029223AL6270905731523630199801998
S/G/Y/R/B/O NT_029223AL627090573152363chr1NT_029223AL1378555735067332000002000
S/G/Y/R/B/O NT_029223AL137855573506733chr1NT_029223AL10994457455643300100100
S/G/Y/R/B/O NT_029223AL109944574556433chr1NT_029223AL391826575959162933190093319
S/G/Y/R/B/O NT_029223AL109944574556433  AL390761573506731802880501885306
S/G/Y/R/B/O NT_029223AL391826575959162chr1NT_029223AL4451935766014030000
S/G/Y/R/B/O NT_029223AL391826575959162  AL139221574556431273619108600042469
S/G/Y/R/B/O NT_029223AL391826575959162  AL39076157455643114000300140003
S/G/Y/R/B/O NT_029223AL445193576601403chr1NT_029223AL3653675772884232000002000
S/G/Y/R/B/O NT_029223AL445193576601403  AL139221574556431578732213060086
S/G/Y/R/B/O NT_029223AL365367577288423chr1NT_029223AL357373578175162801740080174
S/G/Y/R/B/O NT_029223AL365367577288423  AC015639577288421173010124118542
S/G/Y/R/B/O NT_029223AL357373578175162chr1NT_029223AC104464579429071416600041660
S/G/Y/R/B/O NT_029223AL357373578175162  AC01563957660140115418201241155423
S/G/Y/R/B/O NT_029223AC104464579429071chr1NT_029223AL109845580539343341150034115
S/G/Y/R/B/O NT_029223AC104464579429071  AC015639577288421182580018258
S/G/Y/R/B/O NT_029223AC104464579429071  AL359879578175161561277397312366647
S/G/Y/R/B/O NT_029223AL109845580539343chr1NT_029223AL365187581451691887140088714
S/G/Y/R/B/O NT_029223AL109845580539343chr1NT_029223AC027052582459661371422346446943957
S/G/Y/R/B/O NT_029223AL109845580539343  AL359879579429071724235577431182311
S/G/Y/R/B/O NT_029223AL365187581451691chr1NT_029223AC025008581591711777397287256687592
S/G/Y/R/B/O NT_029223AL365187581451691chr1NT_029223AC02705258245966110445914959719115673
S/G/Y/R/B/O NT_029223AL365187581451691chr1NT_029223AL035411582558793540670054067
S/G/Y/R/B/O NT_029223AL365187581451691  AL359879580539341634872692431370492
S/G/Y/R/B/O NT_029223AC025008581591711chr1NT_029223AC027052582459661432329272052504
S/G/Y/R/B/O NT_029223AC025008581591711chr1NT_029223AL0354115825587931268490564127413
S/G/Y/R/B/O NT_029223AC027052582459661chr1NT_029223AL035411582558793579420528963231
S/G/Y/R/B/O NT_029223AC027052582459661chr1NT_029223AL109845580539343371422346446943957
S/G/Y/R/B/O NT_029223AC027052582459661chr1NT_029223AL36518758145169110445914959719115673
S/G/Y/R/B/O NT_029223AC027052582459661  AL359879580539341178500433522185
S/G/Y/R/B/O NT_029223AL035411582558793chr1NT_029223AL4500245833557030198701987
S/G/Y/R/B/O NT_029223AL035411582558793chr1NT_029223AC0250085815917111268490564127413
S/G/Y/R/B/O NT_029223AL035411582558793chr1NT_029223AL365187581451691540670054067
S/G/Y/R/B/O NT_029223AL450024583355703chr1NT_029223AL1369855835612230199901999
S/G/Y/R/B/O NT_029223AL136985583561223chr1NT_029223AL6067625849678630199901999
S/G/Y/R/B/O NT_029223AL606762584967863chr1NT_029223AC1052775851773310199601996
S/G/Y/R/B/O NT_029223AC105277585177331chr1NT_029223AL7138595855599710000
S/G/Y/R/B/O NT_029223AC105277585177331chr1NT_029223AC080177592311281824472407113715120233
S/G/Y/R/B/O NT_029223AL713859585559971chr1NT_029223AL390234586646493461690046169
S/G/Y/R/B/O NT_029223AL713859585559971chr1NT_029223AC069129587855091195160019516
S/G/Y/R/B/O NT_029223AL713859585559971  AC01361058496786137867160871948473438
S/G/Y/R/B/O NT_029223AL390234586646493chr1NT_029223AC06912958785509178026588618995102907
S/G/Y/R/B/O NT_029223AL390234586646493  AC013610586646491646091871719351102677
S/G/Y/R/B/O NT_029223AC069129587855091chr1NT_029223AC02579358805777134703442465511567
S/G/Y/R/B/O NT_029223AC069129587855091chr1NT_029223AC093424588253901211823444466929295
S/G/Y/R/B/O NT_029223AC069129587855091chr1NT_029223AL713859585559971195160019516
S/G/Y/R/B/O NT_029223AC069129587855091  AC01361058555997115373129081944147722
S/G/Y/R/B/O NT_029223AC025793588057771chr1NT_029223AC0934245882539011353572016679138052
S/G/Y/R/B/O NT_029223AC025793588057771chr1NT_029223AC016336589753891215640021564
S/G/Y/R/B/O NT_029223AC025793588057771chr1NT_029223AL596322589772443282950028295
S/G/Y/R/B/O NT_029223AC093424588253901chr1NT_029223AC0163365897538913829003829
S/G/Y/R/B/O NT_029223AC093424588253901chr1NT_029223AC069129587855091211823444466929295
S/G/Y/R/B/O NT_029223AC016336589753891chr1NT_029223AL59632258977244390142250730385123034
S/G/Y/R/B/O NT_029223AC016336589753891chr1NT_029223AC025793588057771215640021564
S/G/Y/R/B/O NT_029223AC016336589753891chr1NT_029223AC09342558995729370722250730365103594
S/G/Y/R/B/O NT_029223AC016336589753891  AL1389031073146391140520590419956
S/G/Y/R/B/O NT_029223AL596322589772443chr1NT_029223AC09342558995729311055900110559
S/G/Y/R/B/O NT_029223AL596322589772443chr1NT_029223AC025793588057771282950028295
S/G/Y/R/B/O NT_029223AL596322589772443  AL1389031073146391581910058191
S/G/Y/R/B/O NT_029223AC093425589957293chr1NT_029223AL5924315917320632022002022
S/G/Y/R/B/O NT_029223AC093425589957293chr1NT_029223AC01633658975389170722250730365103594
S/G/Y/R/B/O NT_029223AC093425589957293  AL138903107314639191598013535105133
S/G/Y/R/B/O NT_029223AL592431591732063chr1NT_029223AC0801775923112810000
S/G/Y/R/B/O NT_029223AC080177592311281         
S/G/Y/R/B/O NT_029223AC080177592311281chr1NT_029223AC105277585177331824472407113715120233