Home    Genome Browser    BLAT Search    Help
  Chromosome 1 - Clone Overlaps - Single Contig
 
Description of this page Main Reports Page Main Assembly Page Main Overlap Page Whole Chromosome Single Contigs

Line color code:

  • White: overlap with immediately succeeding clone
  • Green: overlap with clone in same contig
  • Pink: overlap with clone in same chromosome, different contig
  • Red: overlap with clone on different chromosome
  • Yellow: overlap with clone not used in assembly
NT_032954 NT_004350 NT_022058 NT_004321 NT_004547 NT_021917 NT_028054 NT_032970
NT_032967 NT_021937 NT_004488 NT_022041 NT_004873 NT_030584 NT_004572 NT_029218
NT_004610 NT_032979 NT_004391 NT_030571 NT_004782 NT_028053 NT_004538 NT_004511
NT_004852 NT_032963 NT_032971 NT_032972 NT_031724 NT_004386 NT_032978 NT_032977
NT_004424 NT_032976 NT_032965 NT_032973 NT_031689 NT_029223 NT_004641 NT_029865
NT_031737 NT_004636 NT_032948 NT_004464 NT_032953 NT_004483 NT_004302 NT_032960
NT_032956 NT_032974 NT_004902 NT_026943 NT_029231 NT_004658 NT_004686 NT_021979
NT_030565 NT_028050 NT_004308 NT_004623 NT_030567 NT_032957 NT_021977 NT_029860
NT_019273 NT_031697 NT_004754 NT_032961 NT_032975 NT_022052 NT_022071 NT_004434
NT_032962 NT_021907 NT_004441 NT_030577 NT_004858 NT_019291 NT_031708 NT_029226
NT_026945 NT_004982 NT_032952 NT_004668 NT_029874 NT_004487 NT_032958 NT_004599
NT_031716 NT_004671 NT_021909 NT_004416 NT_029862 NT_021905 NT_032947 NT_021877
NT_004612 NT_031718 NT_032950 NT_004525 NT_032955 NT_029863 NT_032951 NT_021953
NT_004861 NT_031696 NT_004908 NT_004559 NT_031728 NT_021973 NT_004753 NT_004433
NT_030561 NT_004836 NT_031685 NT_004771 NT_004734 NT_031700 NT_031719 NT_004536
NT_032964 NT_031732 NT_032966 NT_031730 NT_029870 NT_032969 NT_032968


  NT_004754
 
LinksContig1Acc1Start1PhsChr2Contig2Acc2Start2PhsStrong OverlapMedium OverlapWeak OverlapTotal Overlap
S/G/Y/R/B/O NT_004754AL4452311182244283chr1NT_004754AL13924811835127530199801998
S/G/Y/R/B/O NT_004754AL1392481183512753chr1NT_004754AL39147611835326930199301993
S/G/Y/R/B/O NT_004754AL3914761183532693chr1NT_004754AL36526411852286730000
S/G/Y/R/B/O NT_004754AL3914761183532693chr1NT_004754AC0534941186471671332220033222
S/G/Y/R/B/O NT_004754AL3652641185228673chr1NT_004754AL36029811853943230000
S/G/Y/R/B/O NT_004754AL3602981185394323chr1NT_004754AC0534941186471671951971659156398419
S/G/Y/R/B/O NT_004754AC0534941186471671chr1NT_004754AL3580721186518372200950020095
S/G/Y/R/B/O NT_004754AC0534941186471671chr1NT_004754AL3914761183532693332220033222
S/G/Y/R/B/O NT_004754AL3580721186518372chr1NT_004754AL1579021187741383376570037657
S/G/Y/R/B/O NT_004754AL3580721186518372  AC0226711183532691111171132440124415
S/G/Y/R/B/O NT_004754AL1579021187741383chr1NT_004754AL36533111889053530199801998
S/G/Y/R/B/O NT_004754AL1579021187741383  AC0123471187741381216840021684
S/G/Y/R/B/O NT_004754AL1579021187741383  AC0226711187741381596191533061152
S/G/Y/R/B/O NT_004754AL1579021187741383  AC0848751187741381243154937186531117
S/G/Y/R/B/O NT_004754AL3653311188905353chr1NT_004754AL39087711894685632000002000
S/G/Y/R/B/O NT_004754AL3653311188905353  AC0116461188905351252280025228
S/G/Y/R/B/O NT_004754AL3653311188905353  AC01234711889053512317503770960884
S/G/Y/R/B/O NT_004754AL3653311188905353  AC0848751188905351284670028467
S/G/Y/R/B/O NT_004754AL3908771189468563chr1NT_004754AL12200711909645430000
S/G/Y/R/B/O NT_004754AL3908771189468563  AC0116461189468561981942520210297133693
S/G/Y/R/B/O NT_004754AL3908771189468563  AC012347118946856110123500101235
S/G/Y/R/B/O NT_004754AL3908771189468563  AC0848751189468561580549881102468959
S/G/Y/R/B/O NT_004754AL3908771189468563  AL3653201189468561264537407831742177
S/G/Y/R/B/O NT_004754AL1220071190964543chr1NT_004754AL12199311916435530000
S/G/Y/R/B/O NT_004754AL1220071190964543  AL36532011889053513379414953295751704
S/G/Y/R/B/O NT_004754AL1219931191643553chr1NT_004754AL139345119262317300100100
S/G/Y/R/B/O NT_004754AL1393451192623173chr1NT_004754AL513191119320180300100100
S/G/Y/R/B/O NT_004754AL1393451192623173  AL39180611916435513174801202843776
S/G/Y/R/B/O NT_004754AL5131911193201803chr1NT_004754AL391557119473910300100100
S/G/Y/R/B/O NT_004754AL5131911193201803  AL3899261192623171119528017655137183
S/G/Y/R/B/O NT_004754AL5131911193201803  AL391806119473910197926214912063112138
S/G/Y/R/B/O NT_004754AL3915571194739103chr1NT_004754AL51282311960452530000
S/G/Y/R/B/O NT_004754AL5128231196045253chr1NT_004754AL122006119629376300100100
S/G/Y/R/B/O NT_004754AL1220061196293763chr1NT_004754AL39011711978066730000
S/G/Y/R/B/O NT_004754AL1220061196293763  AL1389291196293761633040063304
S/G/Y/R/B/O NT_004754AL3901171197806673chr1NT_004754AL60684311987982730199901999
S/G/Y/R/B/O NT_004754AL3901171197806673chr1NT_004754AC02761012006446913203612315976154112
S/G/Y/R/B/O NT_004754AL3901171197806673  AL1389291200644691585747479238968442
S/G/Y/R/B/O NT_004754AL6068431198798273chr1NT_004754AL13914811997385530000
S/G/Y/R/B/O NT_004754AL6068431198798273chr1NT_004754AC02761012006446913652174871871062718
S/G/Y/R/B/O NT_004754AL6068431198798273chr1NT_032961AC0799321202491421404880709947587
S/G/Y/R/B/O NT_004754AL6068431198798273chr1NT_032961AL1332901201480091721430072143
S/G/Y/R/B/O NT_004754AL1391481199738553chr1NT_004754AC02761012006446910000
S/G/Y/R/B/O NT_004754AL1391481199738553chr1NT_032961AC07993212024914214745102873576186
S/G/Y/R/B/O NT_004754AL1391481199738553chr1NT_032961AL1332901201480091307212038032759
S/G/Y/R/B/O NT_004754AC0276101200644691         
S/G/Y/R/B/O NT_004754AC0276101200644691chr1NT_032961AC0799321202491421128424670498222494
S/G/Y/R/B/O NT_004754AC0276101200644691chr1NT_032961AL1332901201480091186146682846233758
S/G/Y/R/B/O NT_004754AC0276101200644691chr1NT_004754AL39011711978066733203612315976154112
S/G/Y/R/B/O NT_004754AC0276101200644691chr1NT_004754AL60684311987982733652174871871062718
S/G/Y/R/B/O NT_004754AC0276101200644691  AL13892912014800911756911120465433343