Chromosome 1 - Clone Overlaps

Chromosome 1 - Clone Overlaps - Single Contig

Description of this page

Line color code:

White: overlap with immediately succeeding clone
Green: overlap with clone in same contig
Pink: overlap with clone in same chromosome, different contig
Red: overlap with clone on different chromosome
Yellow: overlap with clone not used in assembly

NT_032954	NT_004350	NT_022058	NT_004321	NT_004547	NT_021917	NT_028054	NT_032970
NT_032967	NT_021937	NT_004488	NT_022041	NT_004873	NT_030584	NT_004572	NT_029218
NT_004610	NT_032979	NT_004391	NT_030571	NT_004782	NT_028053	NT_004538	NT_004511
NT_004852	NT_032963	NT_032971	NT_032972	NT_031724	NT_004386	NT_032978	NT_032977
NT_004424	NT_032976	NT_032965	NT_032973	NT_031689	NT_029223	NT_004641	NT_029865
NT_031737	NT_004636	NT_032948	NT_004464	NT_032953	NT_004483	NT_004302	NT_032960
NT_032956	NT_032974	NT_004902	NT_026943	NT_029231	NT_004658	NT_004686	NT_021979
NT_030565	NT_028050	NT_004308	NT_004623	NT_030567	NT_032957	NT_021977	NT_029860
NT_019273	NT_031697	NT_004754	NT_032961	NT_032975	NT_022052	NT_022071	NT_004434
NT_032962	NT_021907	NT_004441	NT_030577	NT_004858	NT_019291	NT_031708	NT_029226
NT_026945	NT_004982	NT_032952	NT_004668	NT_029874	NT_004487	NT_032958	NT_004599
NT_031716	NT_004671	NT_021909	NT_004416	NT_029862	NT_021905	NT_032947	NT_021877
NT_004612	NT_031718	NT_032950	NT_004525	NT_032955	NT_029863	NT_032951	NT_021953
NT_004861	NT_031696	NT_004908	NT_004559	NT_031728	NT_021973	NT_004753	NT_004433
NT_030561	NT_004836	NT_031685	NT_004771	NT_004734	NT_031700	NT_031719	NT_004536
NT_032964	NT_031732	NT_032966	NT_031730	NT_029870	NT_032969	NT_032968

NT_004612

Links	Contig1	Acc1	Start1	Phs	Chr2	Contig2	Acc2	Start2	Phs	Strong Overlap	Medium Overlap	Weak Overlap	Total Overlap
S/G/Y/R/B/O	NT_004612	AC096639	203883503	1	chr1	NT_004612	AC011700	203946599	3	50708	0	0	50708
S/G/Y/R/B/O	NT_004612	AC096639	203883503	1	chr1	NT_004612	AC037463	206332645	1	40451	0	0	40451
S/G/Y/R/B/O	NT_004612	AC011700	203946599	3	chr1	NT_004612	AL606537	204101331	3	82870	0	0	82870
S/G/Y/R/B/O	NT_004612	AC011700	203946599	3			AC011192	206339439	1	54984	2869	0	57853
S/G/Y/R/B/O	NT_004612	AL606537	204101331	3	chr1	NT_004612	AL592287	204135166	3	0	0	0	0
S/G/Y/R/B/O	NT_004612	AL606537	204101331	3			AC011192	204101331	1	78386	2871	0	81257
S/G/Y/R/B/O	NT_004612	AL592287	204135166	3	chr1	NT_004612	AC013624	204322553	1	156853	0	0	156853
S/G/Y/R/B/O	NT_004612	AL592287	204135166	3	chr1	NT_004612	AL590137	204345849	1	23195	2642	0	25837
S/G/Y/R/B/O	NT_004612	AL592287	204135166	3			AC011192	203946599	1	11975	0	18519	30494
S/G/Y/R/B/O	NT_004612	AL592287	204135166	3			AC074241	204322553	1	85607	10583	87018	183208
S/G/Y/R/B/O	NT_004612	AC013624	204322553	1	chr1	NT_004612	AL590137	204345849	1	46495	2649	0	49144
S/G/Y/R/B/O	NT_004612	AC013624	204322553	1			AC074241	140526421	1	76178	10570	61932	148680
S/G/Y/R/B/O	NT_004612	AL590137	204345849	1	chr1	NT_004612	AL603838	204370281	3	29900	2433	0	32333
S/G/Y/R/B/O	NT_004612	AL590137	204345849	1	chr1	NT_004612	AL592287	204135166	3	23195	2642	0	25837
S/G/Y/R/B/O	NT_004612	AL590137	204345849	1			AC074241	204322553	1	11119	2641	0	13760
S/G/Y/R/B/O	NT_004612	AL603838	204370281	3	chr1	NT_004612	AL592216	204405297	3	2000	0	0	2000
S/G/Y/R/B/O	NT_004612	AL592216	204405297	3	chr1	NT_004612	AL445305	204475484	2	2000	0	0	2000
S/G/Y/R/B/O	NT_004612	AL445305	204475484	2	chr1	NT_004612	AL445666	204666746	3	0	1992	0	1992
S/G/Y/R/B/O	NT_004612	AL445305	204475484	2	chr1	NT_004612	AC044820	204724413	1	52189	4709	21982	78880
S/G/Y/R/B/O	NT_004612	AL445666	204666746	3	chr1	NT_004612	AC044820	204724413	1	57142	0	1076	58218
S/G/Y/R/B/O	NT_004612	AL445666	204666746	3	chr1	NT_004612	AC018590	204756692	1	50895	0	0	50895
S/G/Y/R/B/O	NT_004612	AC044820	204724413	1	chr1	NT_004612	AC114496	204728493	1	24175	2768	0	26943
S/G/Y/R/B/O	NT_004612	AC044820	204724413	1	chr1	NT_004612	AC018590	204756692	1	57892	5554	0	63446
S/G/Y/R/B/O	NT_004612	AC044820	204724413	1	chr1	NT_004612	AL445305	204475484	2	52189	4709	21982	78880
S/G/Y/R/B/O	NT_004612	AC114496	204728493	1	chr1	NT_004612	AC018590	204756692	1	63726	6320	8244	78290
S/G/Y/R/B/O	NT_004612	AC114496	204728493	1	chr1	NT_004612	AC099563	204789609	1	32385	0	60208	92593
S/G/Y/R/B/O	NT_004612	AC018590	204756692	1	chr1	NT_004612	AC099563	204789609	1	0	0	0	0
S/G/Y/R/B/O	NT_004612	AC018590	204756692	1	chr1	NT_004612	AC044820	204724413	1	57892	5554	0	63446
S/G/Y/R/B/O	NT_004612	AC018590	204756692	1	chr1	NT_004612	AL445666	204666746	3	50895	0	0	50895
S/G/Y/R/B/O	NT_004612	AC099563	204789609	1	chr1	NT_004612	AL583830	204988279	3	89445	0	0	89445
S/G/Y/R/B/O	NT_004612	AC099563	204789609	1	chr1	NT_004612	AC018971	205011753	1	84744	1729	0	86473
S/G/Y/R/B/O	NT_004612	AC099563	204789609	1	chr1	NT_004612	AC114496	204728493	1	32385	0	60208	92593
S/G/Y/R/B/O	NT_004612	AL583830	204988279	3	chr1	NT_004612	AC018971	205011753	1	117033	1729	0	118762
S/G/Y/R/B/O	NT_004612	AL583830	204988279	3	chr1	NT_004612	AC099675	205033709	1	32770	0	0	32770
S/G/Y/R/B/O	NT_004612	AC018971	205011753	1	chr1	NT_004612	AC099675	205033709	1	51810	0	1443	53253
S/G/Y/R/B/O	NT_004612	AC018971	205011753	1	chr1	NT_004612	AC099563	204789609	1	84744	1729	0	86473
S/G/Y/R/B/O	NT_004612	AC099675	205033709	1	chr1	NT_004612	AC092804	205166150	3	11857	0	0	11857
S/G/Y/R/B/O	NT_004612	AC099675	205033709	1	chr1	NT_004612	AL583830	204988279	3	32770	0	0	32770
S/G/Y/R/B/O	NT_004612	AC092804	205166150	3	chr1	NT_004612	AL450990	205327548	3	2000	0	0	2000
S/G/Y/R/B/O	NT_004612	AL450990	205327548	3	chr1	NT_004612	AL451163	205444658	3	2000	0	0	2000
S/G/Y/R/B/O	NT_004612	AL451163	205444658	3	chr1	NT_004612	AL365315	205515204	3	0	0	0	0
S/G/Y/R/B/O	NT_004612	AL451163	205444658	3			AC066596	205444658	1	32428	6808	22793	62029
S/G/Y/R/B/O	NT_004612	AL365315	205515204	3	chr1	NT_004612	AC092799	205654222	3	53910	0	0	53910
S/G/Y/R/B/O	NT_004612	AL365315	205515204	3	chr3	NT_005927	AC018827	209594	1	33736	2306	34255	70297
S/G/Y/R/B/O	NT_004612	AL365315	205515204	3			AC066596	209594	1	39019	17270	35181	91470
S/G/Y/R/B/O	NT_004612	AL365315	205515204	3			AC067922	209594	3	30095	0	0	30095
S/G/Y/R/B/O	NT_004612	AC092799	205654222	3	chr1	NT_004612	AL513305	205762383	3	2003	0	0	2003
S/G/Y/R/B/O	NT_004612	AC092799	205654222	3	chr3	NT_005927	AC018827	209594	1	45080	3464	35680	84224
S/G/Y/R/B/O	NT_004612	AC092799	205654222	3			AC066596	209594	1	14408	7364	11269	33041
S/G/Y/R/B/O	NT_004612	AC092799	205654222	3			AC067922	209594	3	42866	0	0	42866
S/G/Y/R/B/O	NT_004612	AL513305	205762383	3	chr1	NT_004612	AL358452	205829905	3	2000	0	0	2000
S/G/Y/R/B/O	NT_004612	AL358452	205829905	3	chr1	NT_004612	AL139259	205906891	3	2000	0	0	2000
S/G/Y/R/B/O	NT_004612	AL139259	205906891	3	chr1	NT_004612	AC093581	205933380	3	0	0	0	0
S/G/Y/R/B/O	NT_004612	AC093581	205933380	3	chr1	NT_004612	AL138934	206088372	1	2467	0	0	2467
S/G/Y/R/B/O	NT_004612	AC093581	205933380	3			AC012248	205829905	1	118742	4066	12279	135087
S/G/Y/R/B/O	NT_004612	AL138934	206088372	1	chr1	NT_004612	AL138782	206102791	1	64664	3125	12189	79978
S/G/Y/R/B/O	NT_004612	AL138934	206088372	1	chr1	NT_004612	AC021209	206108884	1	81398	0	0	81398
S/G/Y/R/B/O	NT_004612	AL138934	206088372	1	chr1	NT_028053	AL161641	26543743	1	26738	14898	0	41636
S/G/Y/R/B/O	NT_004612	AL138934	206088372	1			AL353354	26543743	1	11048	13960	10578	35586
S/G/Y/R/B/O	NT_004612	AL138782	206102791	1	chr1	NT_004612	AC021209	206108884	1	70358	10285	15931	96574
S/G/Y/R/B/O	NT_004612	AL138782	206102791	1	chr1	NT_028053	AL161641	26543743	1	22903	18009	5198	46110
S/G/Y/R/B/O	NT_004612	AL138782	206102791	1			AL353354	26543743	1	17774	17465	5924	41163
S/G/Y/R/B/O	NT_004612	AC021209	206108884	1	chr1	NT_004612	AC037463	206332645	1	0	0	0	0
S/G/Y/R/B/O	NT_004612	AC021209	206108884	1	chr1	NT_004612	AL138934	206088372	1	81398	0	0	81398
S/G/Y/R/B/O	NT_004612	AC021209	206108884	1	chr1	NT_028053	AL161641	26543743	1	43954	15217	6044	65215
S/G/Y/R/B/O	NT_004612	AC021209	206108884	1	chr1	NT_004612	AL358858	208715790	3	24885	0	0	24885
S/G/Y/R/B/O	NT_004612	AC021209	206108884	1			AL353354	26543743	1	22532	23704	10555	56791
S/G/Y/R/B/O	NT_004612	AC037463	206332645	1	chr1	NT_004612	AL592063	206339439	3	97602	4781	1109	103492
S/G/Y/R/B/O	NT_004612	AC037463	206332645	1	chr1	NT_004612	AC096639	203883503	1	40451	0	0	40451
S/G/Y/R/B/O	NT_004612	AL592063	206339439	3	chr1	NT_004612	AL590612	206497834	3	0	1999	0	1999
S/G/Y/R/B/O	NT_004612	AL590612	206497834	3	chr1	NT_004612	AL592402	206501614	3	0	1995	0	1995
S/G/Y/R/B/O	NT_004612	AL592402	206501614	3	chr1	NT_004612	AC011880	206701893	1	56207	2825	691	59723
S/G/Y/R/B/O	NT_004612	AL592402	206501614	3			AC013345	206701893	1	144527	2294	19854	166675
S/G/Y/R/B/O	NT_004612	AL592402	206501614	3			AC026154	7810625	1	18156	0	0	18156
S/G/Y/R/B/O	NT_004612	AL592402	206501614	3			AC027076	7810625	1	11724	0	1442	13166
S/G/Y/R/B/O	NT_004612	AC011880	206701893	1	chr1	NT_004612	AL583826	206703633	3	59015	2869	0	61884
S/G/Y/R/B/O	NT_004612	AC011880	206701893	1			AC026154	7810625	1	28156	2825	691	31672
S/G/Y/R/B/O	NT_004612	AC011880	206701893	1			AC027076	7810625	1	39489	0	1054	40543
S/G/Y/R/B/O	NT_004612	AC011880	206701893	1			AL713876	206501614	1	101776	2865	0	104641
S/G/Y/R/B/O	NT_004612	AL583826	206703633	3	chr1	NT_004612	AL512449	206823841	1	2000	0	0	2000
S/G/Y/R/B/O	NT_004612	AL583826	206703633	3			AC027076	206701893	1	53798	4694	897	59389
S/G/Y/R/B/O	NT_004612	AL583826	206703633	3			AL713876	206823841	1	119824	0	0	119824
S/G/Y/R/B/O	NT_004612	AL512449	206823841	1	chr1	NT_004612	AL645860	206998531	3	0	0	0	0
S/G/Y/R/B/O	NT_004612	AL512449	206823841	1			AC026064	206823841	1	90694	6839	29002	126535
S/G/Y/R/B/O	NT_004612	AL645860	206998531	3	chr1	NT_004612	AL592449	207022778	3	0	1997	0	1997
S/G/Y/R/B/O	NT_004612	AL645860	206998531	3			AC026064	206703633	1	22965	1512	0	24477
S/G/Y/R/B/O	NT_004612	AL592449	207022778	3	chr1	NT_004612	AC104333	207134561	1	0	0	0	0
S/G/Y/R/B/O	NT_004612	AL592449	207022778	3			AC026064	207022778	1	12190	0	1894	14084
S/G/Y/R/B/O	NT_004612	AL592449	207022778	3			AL590124	207022778	1	88998	0	0	88998
S/G/Y/R/B/O	NT_004612	AC104333	207134561	1	chr1	NT_004612	AL591647	207221010	2	74517	0	0	74517
S/G/Y/R/B/O	NT_004612	AC104333	207134561	1	chr1	NT_004612	AL451077	207239793	3	55702	0	0	55702
S/G/Y/R/B/O	NT_004612	AC104333	207134561	1			AL590124	207239793	1	67113	0	0	67113
S/G/Y/R/B/O	NT_004612	AL591647	207221010	2	chr1	NT_004612	AL451077	207239793	3	151473	0	0	151473
S/G/Y/R/B/O	NT_004612	AL451077	207239793	3	chr1	NT_004612	AL590648	207389388	3	23978	0	0	23978
S/G/Y/R/B/O	NT_004612	AL451077	207239793	3	chr1	NT_004612	AC104333	207134561	1	55702	0	0	55702
S/G/Y/R/B/O	NT_004612	AL590648	207389388	3	chr1	NT_004612	AL606913	207452484	3	0	0	0	0
S/G/Y/R/B/O	NT_004612	AL590648	207389388	3			AL513471	207239793	1	20205	0	17925	38130
S/G/Y/R/B/O	NT_004612	AL606913	207452484	3	chr1	NT_004612	AC092803	207497467	3	0	0	0	0
S/G/Y/R/B/O	NT_004612	AL606913	207452484	3			AC053505	207221010	1	22407	0	1082	23489
S/G/Y/R/B/O	NT_004612	AL606913	207452484	3			AL513471	207221010	1	42817	0	0	42817
S/G/Y/R/B/O	NT_004612	AC092803	207497467	3	chr1	NT_004612	AL360091	207601114	1	82689	0	0	82689
S/G/Y/R/B/O	NT_004612	AC092803	207497467	3			AC016289	207221010	1	24951	0	0	24951
S/G/Y/R/B/O	NT_004612	AC092803	207497467	3			AC024541	207221010	1	126930	1603	0	128533
S/G/Y/R/B/O	NT_004612	AC092803	207497467	3			AC053505	207221010	1	84695	8602	35056	128353
S/G/Y/R/B/O	NT_004612	AC092803	207497467	3			AL513471	207601114	1	106418	5249	41639	153306
S/G/Y/R/B/O	NT_004612	AL360091	207601114	1	chr1	NT_004612	AL450352	207701903	3	0	0	0	0
S/G/Y/R/B/O	NT_004612	AL360091	207601114	1			AC016289	207601114	1	73305	0	0	73305
S/G/Y/R/B/O	NT_004612	AL360091	207601114	1			AC024541	207601114	1	25046	0	0	25046
S/G/Y/R/B/O	NT_004612	AL360091	207601114	1			AC053505	207601114	1	21871	2707	10137	34715
S/G/Y/R/B/O	NT_004612	AL360091	207601114	1			AL513471	214203813	1	14014	2697	35392	52103
S/G/Y/R/B/O	NT_004612	AL450352	207701903	3	chr1	NT_004612	AL157402	207850664	3	0	1999	0	1999
S/G/Y/R/B/O	NT_004612	AL157402	207850664	3	chr1	NT_004612	AL355988	208058995	1	8637	5322	0	13959
S/G/Y/R/B/O	NT_004612	AL355988	208058995	1	chr1	NT_004612	AL136321	208064502	3	33914	2766	0	36680
S/G/Y/R/B/O	NT_004612	AL136321	208064502	3	chr1	NT_004612	AC096631	208234370	1	28135	0	0	28135
S/G/Y/R/B/O	NT_004612	AC096631	208234370	1	chr1	NT_004612	AC026240	208278987	1	24410	0	3502	27912
S/G/Y/R/B/O	NT_004612	AC096631	208234370	1	chr1	NT_004612	AC011778	208283275	1	82516	0	0	82516
S/G/Y/R/B/O	NT_004612	AC096631	208234370	1	chr1	NT_004612	AC022989	208337791	1	27064	0	0	27064
S/G/Y/R/B/O	NT_004612	AC026240	208278987	1	chr1	NT_004612	AC011778	208283275	1	88378	2460	3405	94243
S/G/Y/R/B/O	NT_004612	AC026240	208278987	1	chr1	NT_004612	AC022989	208337791	1	53690	0	0	53690
S/G/Y/R/B/O	NT_004612	AC026240	208278987	1	chr1	NT_004612	AC105941	208340461	1	17346	1167	0	18513
S/G/Y/R/B/O	NT_004612	AC011778	208283275	1	chr1	NT_004612	AC022989	208337791	1	60819	0	13041	73860
S/G/Y/R/B/O	NT_004612	AC011778	208283275	1	chr1	NT_004612	AC096631	208234370	1	82516	0	0	82516
S/G/Y/R/B/O	NT_004612	AC011778	208283275	1	chr1	NT_004612	AC105941	208340461	1	55479	4999	3396	63874
S/G/Y/R/B/O	NT_004612	AC022989	208337791	1	chr1	NT_004612	AC105941	208340461	1	94010	5002	0	99012
S/G/Y/R/B/O	NT_004612	AC022989	208337791	1	chr1	NT_004612	AC026240	208278987	1	53690	0	0	53690
S/G/Y/R/B/O	NT_004612	AC022989	208337791	1	chr1	NT_004612	AC096631	208234370	1	27064	0	0	27064
S/G/Y/R/B/O	NT_004612	AC022989	208337791	1	chr1	NT_004612	AC099673	208486265	1	40385	0	0	40385
S/G/Y/R/B/O	NT_004612	AC105941	208340461	1	chr1	NT_004612	AC099673	208486265	1	40442	0	0	40442
S/G/Y/R/B/O	NT_004612	AC105941	208340461	1	chr1	NT_004612	AC011778	208283275	1	55479	4999	3396	63874
S/G/Y/R/B/O	NT_004612	AC105941	208340461	1	chr1	NT_004612	AC026240	208278987	1	17346	1167	0	18513
S/G/Y/R/B/O	NT_004612	AC099673	208486265	1	chr1	NT_004612	AC012200	208604657	1	97552	0	0	97552
S/G/Y/R/B/O	NT_004612	AC099673	208486265	1	chr1	NT_004612	AC022989	208337791	1	40385	0	0	40385
S/G/Y/R/B/O	NT_004612	AC099673	208486265	1	chr1	NT_004612	AC099335	208686333	1	37881	0	0	37881
S/G/Y/R/B/O	NT_004612	AC012200	208604657	1	chr1	NT_004612	AC099335	208686333	1	86642	0	0	86642
S/G/Y/R/B/O	NT_004612	AC012200	208604657	1	chr1	NT_004612	AC092018	210560029	3	18051	0	0	18051
S/G/Y/R/B/O	NT_004612	AC099335	208686333	1	chr1	NT_004612	AL358858	208715790	3	0	0	0	0
S/G/Y/R/B/O	NT_004612	AC099335	208686333	1	chr1	NT_004612	AC092018	210560029	3	52400	0	0	52400
S/G/Y/R/B/O	NT_004612	AC099335	208686333	1	chr1	NT_004612	AC099673	208486265	1	37881	0	0	37881
S/G/Y/R/B/O	NT_004612	AL358858	208715790	3	chr1	NT_004612	AL445650	208809646	3	0	0	0	0
S/G/Y/R/B/O	NT_004612	AL358858	208715790	3	chr1	NT_004612	AC021209	206108884	1	24885	0	0	24885
S/G/Y/R/B/O	NT_004612	AL445650	208809646	3	chr1	NT_004612	AL512650	208963251	3	0	0	0	0
S/G/Y/R/B/O	NT_004612	AL445650	208809646	3			AL356008	206102791	1	12899	0	0	12899
S/G/Y/R/B/O	NT_004612	AL445650	208809646	3			AL390775	206102791	1	12804	0	0	12804
S/G/Y/R/B/O	NT_004612	AL512650	208963251	3	chr1	NT_004612	AL513312	209018568	3	0	0	0	0
S/G/Y/R/B/O	NT_004612	AL512650	208963251	3			AC019015	206102791	1	35265	4084	3340	42689
S/G/Y/R/B/O	NT_004612	AL512650	208963251	3			AL356008	206102791	1	57317	0	0	57317
S/G/Y/R/B/O	NT_004612	AL512650	208963251	3			AL390775	206102791	1	38075	2036	2823	42934
S/G/Y/R/B/O	NT_004612	AL513312	209018568	3	chr1	NT_004612	AC096635	209096245	3	0	0	0	0
S/G/Y/R/B/O	NT_004612	AL513312	209018568	3			AC019015	206102791	1	62338	0	0	62338
S/G/Y/R/B/O	NT_004612	AL513312	209018568	3			AL356008	206102791	1	79676	0	0	79676
S/G/Y/R/B/O	NT_004612	AL513312	209018568	3			AL390775	206102791	1	49603	2429	0	52032
S/G/Y/R/B/O	NT_004612	AC096635	209096245	3	chr1	NT_004612	AL603752	209267501	3	0	0	0	0
S/G/Y/R/B/O	NT_004612	AC096635	209096245	3			AL356008	206102791	1	26646	0	0	26646
S/G/Y/R/B/O	NT_004612	AC096635	209096245	3			AL450429	206102791	1	127017	0	0	127017
S/G/Y/R/B/O	NT_004612	AL603752	209267501	3	chr1	NT_004612	AL512626	209314369	3	0	0	0	0
S/G/Y/R/B/O	NT_004612	AL603752	209267501	3			AC012268	206102791	1	32652	0	0	32652
S/G/Y/R/B/O	NT_004612	AL603752	209267501	3			AL450429	206102791	1	22292	0	26526	48818
S/G/Y/R/B/O	NT_004612	AL512626	209314369	3	chr1	NT_004612	AC096634	209419227	3	0	1998	0	1998
S/G/Y/R/B/O	NT_004612	AL512626	209314369	3			AC012268	206102791	1	80068	0	18186	98254
S/G/Y/R/B/O	NT_004612	AC096634	209419227	3	chr1	NT_004612	AL391216	209581153	3	0	1999	0	1999
S/G/Y/R/B/O	NT_004612	AC096634	209419227	3			AC012268	209419227	1	11829	0	0	11829
S/G/Y/R/B/O	NT_004612	AL391216	209581153	3	chr1	NT_004612	AL499609	209680695	3	2000	0	0	2000
S/G/Y/R/B/O	NT_004612	AL499609	209680695	3	chr1	NT_004612	AC096641	209815210	3	0	0	0	0
S/G/Y/R/B/O	NT_004612	AL499609	209680695	3			AC025988	209680695	1	84561	2375	0	86936
S/G/Y/R/B/O	NT_004612	AC096641	209815210	3	chr1	NT_004612	AL354659	209998361	3	0	0	0	0
S/G/Y/R/B/O	NT_004612	AC096641	209815210	3			AC009420	209581153	1	148050	0	0	148050
S/G/Y/R/B/O	NT_004612	AC096641	209815210	3			AC025988	20204109	1	91709	0	0	91709
S/G/Y/R/B/O	NT_004612	AL354659	209998361	3	chr1	NT_004612	AC097061	210131421	3	30310	0	0	30310
S/G/Y/R/B/O	NT_004612	AL354659	209998361	3			AC009420	174474285	1	27467	0	0	27467
S/G/Y/R/B/O	NT_004612	AL354659	209998361	3			AL513172	210131421	1	87133	2514	0	89647
S/G/Y/R/B/O	NT_004612	AC097061	210131421	3	chr1	NT_004612	AL445428	210266422	3	2000	0	0	2000
S/G/Y/R/B/O	NT_004612	AC097061	210131421	3			AL513172	210266422	1	63911	2090	0	66001
S/G/Y/R/B/O	NT_004612	AL445428	210266422	3	chr1	NT_004612	AL591414	210355663	3	2000	0	0	2000
S/G/Y/R/B/O	NT_004612	AL591414	210355663	3	chr1	NT_004612	AL357975	210366927	3	2000	0	0	2000
S/G/Y/R/B/O	NT_004612	AL357975	210366927	3	chr1	NT_004612	AL355526	210426125	1	2000	0	0	2000
S/G/Y/R/B/O	NT_004612	AL355526	210426125	1	chr1	NT_004612	AC024505	210533246	1	167406	11097	2220	180723
S/G/Y/R/B/O	NT_004612	AL355526	210426125	1	chr1	NT_004612	AC099337	213608080	1	55051	3174	0	58225
S/G/Y/R/B/O	NT_004612	AC024505	210533246	1	chr1	NT_004612	AC092018	210560029	3	0	0	0	0
S/G/Y/R/B/O	NT_004612	AC024505	210533246	1	chr1	NT_004612	AC099337	213608080	1	50677	0	1004	51681
S/G/Y/R/B/O	NT_004612	AC092018	210560029	3	chr1	NT_004612	AL450244	210733164	3	0	1995	0	1995
S/G/Y/R/B/O	NT_004612	AC092018	210560029	3	chr1	NT_004612	AC012200	208604657	1	18051	0	0	18051
S/G/Y/R/B/O	NT_004612	AC092018	210560029	3	chr1	NT_004612	AC099335	208686333	1	52400	0	0	52400
S/G/Y/R/B/O	NT_004612	AL450244	210733164	3	chr1	NT_004612	AL590674	210816265	3	2000	0	0	2000
S/G/Y/R/B/O	NT_004612	AL590674	210816265	3	chr1	NT_004612	AL596266	210928321	3	113169	0	0	113169
S/G/Y/R/B/O	NT_004612	AL590674	210816265	3			AC010801	210816265	1	101079	5316	2877	109272
S/G/Y/R/B/O	NT_004612	AL596266	210928321	3	chr1	NT_004612	AL445687	210943464	3	0	0	0	0
S/G/Y/R/B/O	NT_004612	AL596266	210928321	3			AC010801	210928321	1	70309	8204	0	78513
S/G/Y/R/B/O	NT_004612	AL445687	210943464	3	chr1	NT_004612	AL591670	211109572	3	0	0	0	0
S/G/Y/R/B/O	NT_004612	AL445687	210943464	3			AC009633	210816265	1	143887	7399	1056	152342
S/G/Y/R/B/O	NT_004612	AL445687	210943464	3			AC010801	210816265	1	13704	0	1162	14866
S/G/Y/R/B/O	NT_004612	AL591670	211109572	3	chr1	NT_004612	AC096633	211147738	3	0	1991	0	1991
S/G/Y/R/B/O	NT_004612	AL591670	211109572	3			AL513362	211147738	1	38776	0	0	38776
S/G/Y/R/B/O	NT_004612	AC096633	211147738	3	chr1	NT_004612	AL590126	211323891	3	0	0	0	0
S/G/Y/R/B/O	NT_004612	AC096633	211147738	3			AF190464	211147738	3	158130	0	0	158130
S/G/Y/R/B/O	NT_004612	AC096633	211147738	3			AL513362	211147738	1	30488	7285	82548	120321
S/G/Y/R/B/O	NT_004612	AL590126	211323891	3	chr1	NT_004612	AC097065	211366071	3	0	0	0	0
S/G/Y/R/B/O	NT_004612	AL590126	211323891	3			AF190464	211109572	3	44154	0	0	44154
S/G/Y/R/B/O	NT_004612	AC097065	211366071	3	chr1	NT_004612	AC104461	211540932	3	89216	0	0	89216
S/G/Y/R/B/O	NT_004612	AC097065	211366071	3			AF190464	211540932	3	10666	0	0	10666
S/G/Y/R/B/O	NT_004612	AC104461	211540932	3	chr1	NT_004612	AL359834	211616981	3	2001	0	0	2001
S/G/Y/R/B/O	NT_004612	AL359834	211616981	3	chr1	NT_004612	AL445483	211685228	3	2000	0	0	2000
S/G/Y/R/B/O	NT_004612	AL445483	211685228	3	chr1	NT_004612	AL450104	211847228	3	0	0	0	0
S/G/Y/R/B/O	NT_004612	AL445483	211685228	3			AC025349	211685228	1	17530	0	0	17530
S/G/Y/R/B/O	NT_004612	AL445483	211685228	3			AL445653	211616981	1	120925	0	0	120925
S/G/Y/R/B/O	NT_004612	AL450104	211847228	3	chr1	NT_004612	AC099756	212002007	3	45836	0	0	45836
S/G/Y/R/B/O	NT_004612	AL450104	211847228	3			AC025349	211616981	1	111857	10129	12812	134798
S/G/Y/R/B/O	NT_004612	AL450104	211847228	3			AC027113	211616981	1	24663	4868	0	29531
S/G/Y/R/B/O	NT_004612	AL450104	211847228	3			AL445653	212002007	1	39213	0	0	39213
S/G/Y/R/B/O	NT_004612	AC099756	212002007	3	chr1	NT_004612	AL358473	212123473	3	0	0	0	0
S/G/Y/R/B/O	NT_004612	AC099756	212002007	3			AC025349	212002007	1	36152	2795	9824	48771
S/G/Y/R/B/O	NT_004612	AC099756	212002007	3			AC027113	212002007	1	118675	11619	26863	157157
S/G/Y/R/B/O	NT_004612	AL358473	212123473	3	chr1	NT_004612	AL139159	212199507	1	2835	0	0	2835
S/G/Y/R/B/O	NT_004612	AL139159	212199507	1	chr1	NT_004612	AC104463	212206977	1	0	0	0	0
S/G/Y/R/B/O	NT_004612	AL139159	212199507	1	chr1	NT_004612	AC103925	214340331	1	18917	0	0	18917
S/G/Y/R/B/O	NT_004612	AC104463	212206977	1	chr1	NT_004612	AL359096	212281590	1	3946	3785	328	8059
S/G/Y/R/B/O	NT_004612	AL359096	212281590	1	chr1	NT_004612	AC053522	212316102	1	74723	13726	6632	95081
S/G/Y/R/B/O	NT_004612	AL359096	212281590	1	chr1	NT_004612	AC015973	212328169	3	26041	15847	0	41888
S/G/Y/R/B/O	NT_004612	AL359096	212281590	1	chr1	NT_004612	AC099336	212366640	3	39917	11728	0	51645
S/G/Y/R/B/O	NT_004612	AL359096	212281590	1			AF324892	212206977	3	39916	11735	0	51651
S/G/Y/R/B/O	NT_004612	AC053522	212316102	1	chr1	NT_004612	AC015973	212328169	3	153022	0	2983	156005
S/G/Y/R/B/O	NT_004612	AC015973	212328169	3	chr1	NT_004612	AC099336	212366640	3	133302	0	0	133302
S/G/Y/R/B/O	NT_004612	AC015973	212328169	3	chr1	NT_004612	AL359096	212281590	1	26041	15847	0	41888
S/G/Y/R/B/O	NT_004612	AC015973	212328169	3			AF324892	212366640	3	132930	0	0	132930
S/G/Y/R/B/O	NT_004612	AC099336	212366640	3	chr1	NT_004612	AL589762	212524478	3	0	0	0	0
S/G/Y/R/B/O	NT_004612	AC099336	212366640	3	chr1	NT_004612	AL359096	212281590	1	39917	11728	0	51645
S/G/Y/R/B/O	NT_004612	AC099336	212366640	3			AC074007	212328169	1	16100	0	0	16100
S/G/Y/R/B/O	NT_004612	AC099336	212366640	3			AF324892	212328169	3	149997	0	0	149997
S/G/Y/R/B/O	NT_004612	AL589762	212524478	3	chr1	NT_004612	AL356953	212596567	3	0	0	0	0
S/G/Y/R/B/O	NT_004612	AL589762	212524478	3			AC074007	212281590	1	59118	0	10291	69409
S/G/Y/R/B/O	NT_004612	AL589762	212524478	3			AF324890	212281590	3	51639	0	0	51639
S/G/Y/R/B/O	NT_004612	AL356953	212596567	3	chr1	NT_004612	AL592300	212771921	3	0	0	0	0
S/G/Y/R/B/O	NT_004612	AL356953	212596567	3			AC074007	212281590	1	52591	2725	13409	68725
S/G/Y/R/B/O	NT_004612	AL356953	212596567	3			AL645796	212281590	1	91557	0	0	91557
S/G/Y/R/B/O	NT_004612	AL592300	212771921	3	chr1	NT_004612	AL691482	212839975	1	67897	0	0	67897
S/G/Y/R/B/O	NT_004612	AL592300	212771921	3			AL645796	212839975	1	40206	0	0	40206
S/G/Y/R/B/O	NT_004612	AL691482	212839975	1	chr1	NT_004612	AC099676	212845003	1	79796	0	22584	102380
S/G/Y/R/B/O	NT_004612	AL691482	212839975	1			AL645796	212771921	1	76721	687	0	77408
S/G/Y/R/B/O	NT_004612	AC099676	212845003	1	chr1	NT_004612	AL513217	213044580	3	0	0	0	0
S/G/Y/R/B/O	NT_004612	AC099676	212845003	1			AC025664	212771921	1	35310	1974	0	37284
S/G/Y/R/B/O	NT_004612	AC099676	212845003	1			AF110184	212771921	3	10756	0	0	10756
S/G/Y/R/B/O	NT_004612	AL513217	213044580	3	chr1	NT_004612	AL645504	213066122	3	0	0	0	0
S/G/Y/R/B/O	NT_004612	AL513217	213044580	3			AC025664	212839975	1	21876	0	0	21876
S/G/Y/R/B/O	NT_004612	AL645504	213066122	3	chr1	NT_004612	AC092800	213150242	3	115710	0	0	115710
S/G/Y/R/B/O	NT_004612	AL645504	213066122	3	chr1	NT_004612	AJ251973	213323598	3	82382	0	0	82382
S/G/Y/R/B/O	NT_004612	AL645504	213066122	3			AC025664	212839975	1	103883	6425	3595	113903
S/G/Y/R/B/O	NT_004612	AC092800	213150242	3	chr1	NT_004612	AL512788	213317647	3	0	0	0	0
S/G/Y/R/B/O	NT_004612	AC092800	213150242	3	chr1	NT_004612	AJ251973	213323598	3	135853	0	0	135853
S/G/Y/R/B/O	NT_004612	AC092800	213150242	3			AC025664	213323598	1	34174	0	1328	35502
S/G/Y/R/B/O	NT_004612	AL512788	213317647	3	chr1	NT_004612	AJ251973	213323598	3	5951	0	0	5951
S/G/Y/R/B/O	NT_004612	AJ251973	213323598	3	chr1	NT_004612	AC096677	213383585	3	61978	0	0	61978
S/G/Y/R/B/O	NT_004612	AJ251973	213323598	3	chr1	NT_004612	AC092800	213150242	3	135853	0	0	135853
S/G/Y/R/B/O	NT_004612	AJ251973	213323598	3	chr1	NT_004612	AL645504	213066122	3	82382	0	0	82382
S/G/Y/R/B/O	NT_004612	AJ251973	213323598	3			AL157898	213383585	1	34787	0	7385	42172
S/G/Y/R/B/O	NT_004612	AJ251973	213323598	3			AL355503	213383585	1	40941	0	17063	58004
S/G/Y/R/B/O	NT_004612	AC096677	213383585	3	chr1	NT_004612	AC083954	213545336	1	118378	0	3103	121481
S/G/Y/R/B/O	NT_004612	AC096677	213383585	3	chr1	NT_004612	AL390790	214340319	1	25925	0	0	25925
S/G/Y/R/B/O	NT_004612	AC096677	213383585	3			AL157898	213323598	1	185263	0	18209	203472
S/G/Y/R/B/O	NT_004612	AC096677	213383585	3			AL355503	213323598	1	112662	10285	26564	149511
S/G/Y/R/B/O	NT_004612	AC083954	213545336	1	chr1	NT_004612	AC099337	213608080	1	0	0	0	0
S/G/Y/R/B/O	NT_004612	AC083954	213545336	1	chr1	NT_004612	AL390790	214340319	1	28544	0	6894	35438
S/G/Y/R/B/O	NT_004612	AC083954	213545336	1			AL157898	213383585	1	49520	0	3414	52934
S/G/Y/R/B/O	NT_004612	AC083954	213545336	1			AL355503	213383585	1	33011	2925	0	35936
S/G/Y/R/B/O	NT_004612	AC099337	213608080	1	chr1	NT_004612	AC096638	213754521	3	0	0	0	0
S/G/Y/R/B/O	NT_004612	AC099337	213608080	1	chr1	NT_004612	AC024505	210533246	1	50677	0	1004	51681
S/G/Y/R/B/O	NT_004612	AC099337	213608080	1	chr1	NT_004612	AL355526	210426125	1	55051	3174	0	58225
S/G/Y/R/B/O	NT_004612	AC099337	213608080	1			AL390724	210426125	1	42166	0	0	42166
S/G/Y/R/B/O	NT_004612	AC096638	213754521	3	chr1	NT_004612	AC092015	213940305	3	13335	0	0	13335
S/G/Y/R/B/O	NT_004612	AC096638	213754521	3			AC025404	210426125	1	33791	0	0	33791
S/G/Y/R/B/O	NT_004612	AC096638	213754521	3			AL359456	213940305	1	122294	0	25535	147829
S/G/Y/R/B/O	NT_004612	AC096638	213754521	3			AL390207	213940305	1	10580	10790	0	21370
S/G/Y/R/B/O	NT_004612	AC096638	213754521	3			AL390724	213940305	1	104883	0	12913	117796
S/G/Y/R/B/O	NT_004612	AC092015	213940305	3	chr1	NT_004612	AC022800	214088773	1	23266	0	0	23266
S/G/Y/R/B/O	NT_004612	AC092015	213940305	3			AC025404	214088773	1	106759	4214	0	110973
S/G/Y/R/B/O	NT_004612	AC092015	213940305	3			AL359456	213754521	1	24064	0	0	24064
S/G/Y/R/B/O	NT_004612	AC092015	213940305	3			AL592288	213754521	2	161092	0	0	161092
S/G/Y/R/B/O	NT_004612	AC022800	214088773	1	chr1	NT_004612	AL606468	214097155	3	0	0	0	0
S/G/Y/R/B/O	NT_004612	AC022800	214088773	1			AC025404	213754521	1	14725	0	0	14725
S/G/Y/R/B/O	NT_004612	AC022800	214088773	1			AL592288	213940305	2	56170	0	0	56170
S/G/Y/R/B/O	NT_004612	AL606468	214097155	3	chr1	NT_004612	AL451060	214203813	3	2000	0	0	2000
S/G/Y/R/B/O	NT_004612	AL451060	214203813	3	chr1	NT_004612	AL390790	214340319	1	0	0	0	0
S/G/Y/R/B/O	NT_004612	AL451060	214203813	3			AC016289	214203813	1	31779	0	10416	42195
S/G/Y/R/B/O	NT_004612	AL390790	214340319	1	chr1	NT_004612	AC103925	214340331	1	88086	2363	0	90449
S/G/Y/R/B/O	NT_004612	AL390790	214340319	1	chr1	NT_004612	AC073202	214424924	1	19366	2413	15901	37680
S/G/Y/R/B/O	NT_004612	AL390790	214340319	1	chr1	NT_004612	AC083954	213545336	1	28544	0	6894	35438
S/G/Y/R/B/O	NT_004612	AL390790	214340319	1	chr1	NT_004612	AC096677	213383585	3	25925	0	0	25925
S/G/Y/R/B/O	NT_004612	AL390790	214340319	1	chr1	NT_004612	Z98266	214361319	3	49441	0	0	49441
S/G/Y/R/B/O	NT_004612	AL390790	214340319	1			AL157898	214340331	1	12121	0	0	12121
S/G/Y/R/B/O	NT_004612	AL390790	214340319	1			AY044273	214340331	3	26289	610	0	26899
S/G/Y/R/B/O	NT_004612	AC103925	214340331	1	chr1	NT_004612	Z98266	214361319	3	47526	0	0	47526
S/G/Y/R/B/O	NT_004612	AC103925	214340331	1	chr1	NT_004612	AC073202	214424924	1	86407	2413	31231	120051
S/G/Y/R/B/O	NT_004612	AC103925	214340331	1	chr1	NT_004612	AL139159	212199507	1	18917	0	0	18917
S/G/Y/R/B/O	NT_004612	Z98266	214361319	3	chr1	NT_004612	AC073202	214424924	1	22112	2409	12393	36914
S/G/Y/R/B/O	NT_004612	Z98266	214361319	3	chr1	NT_004612	AL390790	214340319	1	49441	0	0	49441
S/G/Y/R/B/O	NT_004612	AC073202	214424924	1
S/G/Y/R/B/O	NT_004612	AC073202	214424924	1	chr1	NT_004612	AC103925	214340331	1	86407	2413	31231	120051
S/G/Y/R/B/O	NT_004612	AC073202	214424924	1	chr1	NT_004612	AL390790	214340319	1	19366	2413	15901	37680