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  Chromosome 1 - Clone Overlaps - Single Contig
 
Description of this page Main Reports Page Main Assembly Page Main Overlap Page Whole Chromosome Single Contigs

Line color code:

  • White: overlap with immediately succeeding clone
  • Green: overlap with clone in same contig
  • Pink: overlap with clone in same chromosome, different contig
  • Red: overlap with clone on different chromosome
  • Yellow: overlap with clone not used in assembly
NT_032954 NT_004350 NT_022058 NT_004321 NT_004547 NT_021917 NT_028054 NT_032970
NT_032967 NT_021937 NT_004488 NT_022041 NT_004873 NT_030584 NT_004572 NT_029218
NT_004610 NT_032979 NT_004391 NT_030571 NT_004782 NT_028053 NT_004538 NT_004511
NT_004852 NT_032963 NT_032971 NT_032972 NT_031724 NT_004386 NT_032978 NT_032977
NT_004424 NT_032976 NT_032965 NT_032973 NT_031689 NT_029223 NT_004641 NT_029865
NT_031737 NT_004636 NT_032948 NT_004464 NT_032953 NT_004483 NT_004302 NT_032960
NT_032956 NT_032974 NT_004902 NT_026943 NT_029231 NT_004658 NT_004686 NT_021979
NT_030565 NT_028050 NT_004308 NT_004623 NT_030567 NT_032957 NT_021977 NT_029860
NT_019273 NT_031697 NT_004754 NT_032961 NT_032975 NT_022052 NT_022071 NT_004434
NT_032962 NT_021907 NT_004441 NT_030577 NT_004858 NT_019291 NT_031708 NT_029226
NT_026945 NT_004982 NT_032952 NT_004668 NT_029874 NT_004487 NT_032958 NT_004599
NT_031716 NT_004671 NT_021909 NT_004416 NT_029862 NT_021905 NT_032947 NT_021877
NT_004612 NT_031718 NT_032950 NT_004525 NT_032955 NT_029863 NT_032951 NT_021953
NT_004861 NT_031696 NT_004908 NT_004559 NT_031728 NT_021973 NT_004753 NT_004433
NT_030561 NT_004836 NT_031685 NT_004771 NT_004734 NT_031700 NT_031719 NT_004536
NT_032964 NT_031732 NT_032966 NT_031730 NT_029870 NT_032969 NT_032968


  NT_026943
 
LinksContig1Acc1Start1PhsChr2Contig2Acc2Start2PhsStrong OverlapMedium OverlapWeak OverlapTotal Overlap
S/G/Y/R/B/O NT_026943AC026905849522351chr1NT_026943AC10445584961320110347101094104565
S/G/Y/R/B/O NT_026943AC026905849522351chr1NT_026943AL359971850844363752211691272779639
S/G/Y/R/B/O NT_026943AC026905849522351  AC022771847335121215982896235326847
S/G/Y/R/B/O NT_026943AC104455849613201chr1NT_026943AL3599718508443630199101991
S/G/Y/R/B/O NT_026943AL359971850844363chr1NT_026943AC0995618517645532000002000
S/G/Y/R/B/O NT_026943AL359971850844363chr1NT_026943AC026905849522351752211691272779639
S/G/Y/R/B/O NT_026943AL359971850844363  AC022771850844361298277038379240657
S/G/Y/R/B/O NT_026943AC099561851764553chr1NT_026943AL365355853399081243690024369
S/G/Y/R/B/O NT_026943AC099561851764553  AC02277184961320187336106786910104924
S/G/Y/R/B/O NT_026943AC099561851764553  AL13914684961320110302006101109121
S/G/Y/R/B/O NT_026943AL365355853399081chr1NT_026943AC0192618535656710000
S/G/Y/R/B/O NT_026943AL365355853399081chr1NT_026943AC092807853656293437680043768
S/G/Y/R/B/O NT_026943AC019261853565671chr1NT_026943AC0928078536562932877620540131950635
S/G/Y/R/B/O NT_026943AC019261853565671chr1NT_026943AL36021985481446393794124612760109015
S/G/Y/R/B/O NT_026943AC019261853565671  AC098689853656291309691576032545
S/G/Y/R/B/O NT_026943AC019261853565671  AL162260853656291516477442139360482
S/G/Y/R/B/O NT_026943AC092807853656293chr1NT_026943AL360219854814463647550064755
S/G/Y/R/B/O NT_026943AC092807853656293chr1NT_026943AL365355853399081437680043768
S/G/Y/R/B/O NT_026943AL360219854814463chr1NT_026943AL0784598565029930000
S/G/Y/R/B/O NT_026943AL360219854814463chr1NT_026943AC01926185356567193794124612760109015
S/G/Y/R/B/O NT_026943AL360219854814463  AC098689853656291637260114464870
S/G/Y/R/B/O NT_026943AL360219854814463  AL16226085365629186758016118102876
S/G/Y/R/B/O NT_026943AL078459856502993chr1NT_026943AL5901138573224630199601996
S/G/Y/R/B/O NT_026943AL078459856502993  AC098689853656291677600067760
S/G/Y/R/B/O NT_026943AL590113857322463chr1NT_026943AC0986548583013510000
S/G/Y/R/B/O NT_026943AL590113857322463chr1NT_026943AC021172874714631145300351418044
S/G/Y/R/B/O NT_026943AL590113857322463  AF097732874714633199790019979
S/G/Y/R/B/O NT_026943AL590113857322463  AL359271856502991312160031216
S/G/Y/R/B/O NT_026943AC098654858301351chr1NT_026943AC103595859303021401590040159
S/G/Y/R/B/O NT_026943AC098654858301351chr7NT_033969AC022459633676443516470051647
S/G/Y/R/B/O NT_026943AC098654858301351  AL360000859303023202770020277
S/G/Y/R/B/O NT_026943AC103595859303021chr1NT_026943AL03570686010881331324561031885
S/G/Y/R/B/O NT_026943AL035706860108813chr1NT_026943AL1388448615447132000002000
S/G/Y/R/B/O NT_026943AL138844861544713chr1NT_026943AC02295086213063154088099955087
S/G/Y/R/B/O NT_026943AC022950862130631chr1NT_026943AC10445486230152110522920630107292
S/G/Y/R/B/O NT_026943AC022950862130631chr1NT_026943AC025340863553921498950049895
S/G/Y/R/B/O NT_026943AC022950862130631  AL359504861544711623340062334
S/G/Y/R/B/O NT_026943AC104454862301521chr1NT_026943AC025340863553921161060763123737
S/G/Y/R/B/O NT_026943AC025340863553921chr1NT_026943AC069041863705561175312573020104
S/G/Y/R/B/O NT_026943AC025340863553921chr1NT_026943AC022950862130631498950049895
S/G/Y/R/B/O NT_026943AC025340863553921chr1NT_026943AL450063863938843378502572040422
S/G/Y/R/B/O NT_026943AC025340863553921  AL359504862301521832300936992599
S/G/Y/R/B/O NT_026943AC025340863553921  AL450308863938841647752570067345
S/G/Y/R/B/O NT_026943AC069041863705561chr1NT_026943AL45006386393884310716900107169
S/G/Y/R/B/O NT_026943AC069041863705561chr1NT_026943AL359273865247623236350023635
S/G/Y/R/B/O NT_026943AC069041863705561  AC027046863553921454370045437
S/G/Y/R/B/O NT_026943AC069041863705561  AL359504865247621323390032339
S/G/Y/R/B/O NT_026943AC069041863705561  AL450308863938841526750052675
S/G/Y/R/B/O NT_026943AL450063863938843chr1NT_026943AL3592738652476230000
S/G/Y/R/B/O NT_026943AL450063863938843chr1NT_026943AC025340863553921378502572040422
S/G/Y/R/B/O NT_026943AL450063863938843  AC025374863553921140030119615199
S/G/Y/R/B/O NT_026943AL450063863938843  AC027046863553921789540078954
S/G/Y/R/B/O NT_026943AL450063863938843  AL450308863705561619900061990
S/G/Y/R/B/O NT_026943AL359273865247623chr1NT_026943AC027606867277961885070088507
S/G/Y/R/B/O NT_026943AL359273865247623chr1NT_026943AC069041863705561236350023635
S/G/Y/R/B/O NT_026943AL359273865247623  AC025374863705561103026136432486119155
S/G/Y/R/B/O NT_026943AL359273865247623  AC027046863705561864914474141392378
S/G/Y/R/B/O NT_026943AL359273865247623  AF334602863705563190160019016
S/G/Y/R/B/O NT_026943AL359273865247623  AL136113863705561865740086574
S/G/Y/R/B/O NT_026943AC027606867277961chr1NT_026943AC06800886751639122151518687110604
S/G/Y/R/B/O NT_026943AC027606867277961chr1NT_026943AL359762867667461398380363643474
S/G/Y/R/B/O NT_026943AC027606867277961  AL136113867516391270340141128445
S/G/Y/R/B/O NT_026943AC068008867516391chr1NT_026943AL359762867667461885136515375198779
S/G/Y/R/B/O NT_026943AC068008867516391chr1NT_026943AC009265869208473736705601142280693
S/G/Y/R/B/O NT_026943AC068008867516391chr1NT_026943AC114482869935771202880020288
S/G/Y/R/B/O NT_026943AL359762867667461chr1NT_026943AC00926586920847310690800106908
S/G/Y/R/B/O NT_026943AL359762867667461chr1NT_026943AC027606867277961398380363643474
S/G/Y/R/B/O NT_026943AL359762867667461chr1NT_026943AC114482869935771413200041320
S/G/Y/R/B/O NT_026943AC009265869208473chr1NT_026943AC11448286993577111387800113878
S/G/Y/R/B/O NT_026943AC009265869208473chr1NT_026943AC068008867516391736705601142280693
S/G/Y/R/B/O NT_026943AC009265869208473  AL3595048699357713460898472660571060
S/G/Y/R/B/O NT_026943AC114482869935771chr1NT_026943AC10416987018866141666042842094
S/G/Y/R/B/O NT_026943AC114482869935771chr1NT_026943AC068008867516391202880020288
S/G/Y/R/B/O NT_026943AC114482869935771chr1NT_026943AL359762867667461413200041320
S/G/Y/R/B/O NT_026943AC114482869935771  AL35950487018866147970127242659587289
S/G/Y/R/B/O NT_026943AC104169870188661chr1NT_026943AL139150871283863231860023186
S/G/Y/R/B/O NT_026943AC104169870188661  AL359504871283861219652898024863
S/G/Y/R/B/O NT_026943AL139150871283863chr1NT_026943AL3587898724397230000
S/G/Y/R/B/O NT_026943AL139150871283863  AC013291871283861493960049396
S/G/Y/R/B/O NT_026943AL358789872439723chr1NT_026943AL6037508740977132000002000
S/G/Y/R/B/O NT_026943AL358789872439723chr1NT_026943AC02117287471463110925753921325115974
S/G/Y/R/B/O NT_026943AL358789872439723  AC01329187018866110132802358103686
S/G/Y/R/B/O NT_026943AL358789872439723  AL359271874714631600170060017
S/G/Y/R/B/O NT_026943AL603750874097713chr1NT_026943AC021172874714631410370133842375
S/G/Y/R/B/O NT_026943AL603750874097713  AL359271872439721635440063544
S/G/Y/R/B/O NT_026943AC021172874714631         
S/G/Y/R/B/O NT_026943AC021172874714631chr1NT_026943AL35878987243972310925753921325115974
S/G/Y/R/B/O NT_026943AC021172874714631chr1NT_026943AL590113857322463145300351418044
S/G/Y/R/B/O NT_026943AC021172874714631  AC013291872439721198100132521135
S/G/Y/R/B/O NT_026943AC021172874714631  AL3592718724397219271232758196104183