Home    Genome Browser    BLAT Search    Help
  Chromosome 1 - Clone Overlaps - Single Contig
 
Description of this page Main Reports Page Main Assembly Page Main Overlap Page Whole Chromosome Single Contigs

Line color code:

  • White: overlap with immediately succeeding clone
  • Green: overlap with clone in same contig
  • Pink: overlap with clone in same chromosome, different contig
  • Red: overlap with clone on different chromosome
  • Yellow: overlap with clone not used in assembly
NT_032954 NT_004350 NT_022058 NT_004321 NT_004547 NT_021917 NT_028054 NT_032970
NT_032967 NT_021937 NT_004488 NT_022041 NT_004873 NT_030584 NT_004572 NT_029218
NT_004610 NT_032979 NT_004391 NT_030571 NT_004782 NT_028053 NT_004538 NT_004511
NT_004852 NT_032963 NT_032971 NT_032972 NT_031724 NT_004386 NT_032978 NT_032977
NT_004424 NT_032976 NT_032965 NT_032973 NT_031689 NT_029223 NT_004641 NT_029865
NT_031737 NT_004636 NT_032948 NT_004464 NT_032953 NT_004483 NT_004302 NT_032960
NT_032956 NT_032974 NT_004902 NT_026943 NT_029231 NT_004658 NT_004686 NT_021979
NT_030565 NT_028050 NT_004308 NT_004623 NT_030567 NT_032957 NT_021977 NT_029860
NT_019273 NT_031697 NT_004754 NT_032961 NT_032975 NT_022052 NT_022071 NT_004434
NT_032962 NT_021907 NT_004441 NT_030577 NT_004858 NT_019291 NT_031708 NT_029226
NT_026945 NT_004982 NT_032952 NT_004668 NT_029874 NT_004487 NT_032958 NT_004599
NT_031716 NT_004671 NT_021909 NT_004416 NT_029862 NT_021905 NT_032947 NT_021877
NT_004612 NT_031718 NT_032950 NT_004525 NT_032955 NT_029863 NT_032951 NT_021953
NT_004861 NT_031696 NT_004908 NT_004559 NT_031728 NT_021973 NT_004753 NT_004433
NT_030561 NT_004836 NT_031685 NT_004771 NT_004734 NT_031700 NT_031719 NT_004536
NT_032964 NT_031732 NT_032966 NT_031730 NT_029870 NT_032969 NT_032968


  NT_004836
 
LinksContig1Acc1Start1PhsChr2Contig2Acc2Start2PhsStrong OverlapMedium OverlapWeak OverlapTotal Overlap
S/G/Y/R/B/O NT_004836AL1334182319312323chr1NT_004836AL3919942320088172283010028301
S/G/Y/R/B/O NT_004836AL1334182319312323  AL3567812316220141761520076152
S/G/Y/R/B/O NT_004836AL1334182319312323  AL5922902320088171775850077585
S/G/Y/R/B/O NT_004836AL3919942320088172chr1NT_004836AL35755623214709930000
S/G/Y/R/B/O NT_004836AL3919942320088172  AL356781231931232172932032582105514
S/G/Y/R/B/O NT_004836AL3919942320088172  AL5922902319312321283010028301
S/G/Y/R/B/O NT_004836AL3575562321470993chr1NT_004836AL67223723219850632000002000
S/G/Y/R/B/O NT_004836AL6722372321985063chr1NT_004836AL13592823223888630199901999
S/G/Y/R/B/O NT_004836AL1359282322388863chr1NT_004836AL67223823231982530199501995
S/G/Y/R/B/O NT_004836AL1359282322388863  AL1626112321470991508201899052719
S/G/Y/R/B/O NT_004836AL6722382323198253chr1NT_004836AL58384423235749832000002000
S/G/Y/R/B/O NT_004836AL6722382323198253  AL1626112322388861275380195629494
S/G/Y/R/B/O NT_004836AL5838442323574983chr1NT_004836AL39076523243273730000
S/G/Y/R/B/O NT_004836AL5838442323574983  AL1626112323574981164620816624628
S/G/Y/R/B/O NT_004836AL3907652324327373chr1NT_004836AL12199723251076132000002000
S/G/Y/R/B/O NT_004836AL3907652324327373  AC0093342323198252775840077584
S/G/Y/R/B/O NT_004836AL1219972325107613chr1NT_004836AL13328623262328730000
S/G/Y/R/B/O NT_004836AL1219972325107613  AC0093342325107612899510089951
S/G/Y/R/B/O NT_004836AL1332862326232873chr1NT_004836AL13916123271654130200002000
S/G/Y/R/B/O NT_004836AL1391612327165413chr1NT_004836AL12201823281814932000002000
S/G/Y/R/B/O NT_004836AL1220182328181493chr1NT_004836AL13916223294496032000002000
S/G/Y/R/B/O NT_004836AL1220182328181493  AF0487292326232873286920028692
S/G/Y/R/B/O NT_004836AL1391622329449603chr1NT_004836AL45030923301727930000
S/G/Y/R/B/O NT_004836AL1391622329449603  AC0736382329449601323200032320
S/G/Y/R/B/O NT_004836AL4503092330172793chr1NT_004836AL35469323318192632000002000
S/G/Y/R/B/O NT_004836AL4503092330172793  AC01643823281814917951601372493240
S/G/Y/R/B/O NT_004836AL4503092330172793  AC0736382328181491105871778122399136051
S/G/Y/R/B/O NT_004836AL3546932331819263chr1NT_004836AL13610523325891230000
S/G/Y/R/B/O NT_004836AL3546932331819263  AC01643823318192614594719271031858192
S/G/Y/R/B/O NT_004836AL3546932331819263  AL3907642331819261490940049094
S/G/Y/R/B/O NT_004836AL1361052332589123chr1NT_004836AL3599212333531283413890041389
S/G/Y/R/B/O NT_004836AL1361052332589123  AL1358432330172791249100024910
S/G/Y/R/B/O NT_004836AL1361052332589123  AL39076423335312814544601439559841
S/G/Y/R/B/O NT_004836AL3599212333531283chr1NT_004836AL35918523352545430000
S/G/Y/R/B/O NT_004836AL3599212333531283  AC010807233353128116306425311538167133
S/G/Y/R/B/O NT_004836AL3599212333531283  AL1358432333531281729615514808886563
S/G/Y/R/B/O NT_004836AL3599212333531283  AL35755423325891211911001868037790
S/G/Y/R/B/O NT_004836AL3599212333531283  AL3907642332589121604440060444
S/G/Y/R/B/O NT_004836AL3591852335254543chr1NT_004836AL35925923363229532000002000
S/G/Y/R/B/O NT_004836AL3591852335254543  AL357554233258912184618016512101130
S/G/Y/R/B/O NT_004836AL3592592336322953chr1NT_004836AL59613323380304830000
S/G/Y/R/B/O NT_004836AL3592592336322953  AC074231233632295276333043995120328
S/G/Y/R/B/O NT_004836AL3592592336322953  AC079975233632295176540187475698100985
S/G/Y/R/B/O NT_004836AL3592592336322953  AC0801492336322951133497011011144508
S/G/Y/R/B/O NT_004836AL3592592336322953  AL3575542336322951143480014348
S/G/Y/R/B/O NT_004836AL5961332338030483chr1NT_004836AL39180923383089920199701997
S/G/Y/R/B/O NT_004836AL3918092338308992chr1NT_004836AL35677323399642430000
S/G/Y/R/B/O NT_004836AL3918092338308992  AC0079902338308991199862673022659
S/G/Y/R/B/O NT_004836AL3918092338308992  AL356582233830899172877029981102858
S/G/Y/R/B/O NT_004836AL3567732339964243chr1NT_004836AL44547323410304930199801998
S/G/Y/R/B/O NT_004836AL3567732339964243  AC0079902338030481922790092279
S/G/Y/R/B/O NT_004836AL3567732339964243  AL3565822338030481448320044832
S/G/Y/R/B/O NT_004836AL4454732341030493chr1NT_004836AL44206523428459630000
S/G/Y/R/B/O NT_004836AL4454732341030493chr1NT_004836AC0222482343872581564120056412
S/G/Y/R/B/O NT_004836AL4454732341030493  AC0079902341030491359970035997
S/G/Y/R/B/O NT_004836AL4420652342845963chr1NT_004836AC02224823438725819412841812222100531
S/G/Y/R/B/O NT_004836AC0222482343872581chr1NT_004836AL36533223440803435765005765
S/G/Y/R/B/O NT_004836AC0222482343872581chr1NT_004836AL4454732341030493564120056412
S/G/Y/R/B/O NT_004836AC0222482343872581  AL3546632344080341408345053705652943
S/G/Y/R/B/O NT_004836AL3653322344080343chr1NT_004836AL51313023457434130199801998
S/G/Y/R/B/O NT_004836AL3653322344080343  AC069110234387258113998522490142234
S/G/Y/R/B/O NT_004836AL3653322344080343  AL3546632343872581718530071853
S/G/Y/R/B/O NT_004836AL5131302345743413chr1NT_004836AL35992423459214030000
S/G/Y/R/B/O NT_004836AL5131302345743413  AC0691102345743411180720018072
S/G/Y/R/B/O NT_004836AL5131302345743413  AL3582122345743411111710457815749
S/G/Y/R/B/O NT_004836AL3599242345921403chr1NT_004836AL59039623471194030199901999
S/G/Y/R/B/O NT_004836AL3599242345921403chr1NT_004836AC0244982348320481100762349012425
S/G/Y/R/B/O NT_004836AL3599242345921403  AL358212234832048112091500120915
S/G/Y/R/B/O NT_004836AL5903962347119403chr1NT_004836AC024498234832048110878203439112221
S/G/Y/R/B/O NT_004836AL5903962347119403chr1NT_004836AL3592032348422652535850053585
S/G/Y/R/B/O NT_004836AL5903962347119403  AL3582122348320481391460039146
S/G/Y/R/B/O NT_004836AC0244982348320481chr1NT_004836AL3592032348422652338657150103542050
S/G/Y/R/B/O NT_004836AC0244982348320481chr1NT_004836AL3599242345921403100762349012425
S/G/Y/R/B/O NT_004836AC0244982348320481  AL3582122345921401424742351240447229
S/G/Y/R/B/O NT_004836AL3592032348422652         
S/G/Y/R/B/O NT_004836AL3592032348422652chr1NT_004836AL5903962347119403535850053585