Home    Genome Browser    BLAT Search    Help
  Chromosome 1 - Clone Overlaps - Single Contig
 
Description of this page Main Reports Page Main Assembly Page Main Overlap Page Whole Chromosome Single Contigs

Line color code:

  • White: overlap with immediately succeeding clone
  • Green: overlap with clone in same contig
  • Pink: overlap with clone in same chromosome, different contig
  • Red: overlap with clone on different chromosome
  • Yellow: overlap with clone not used in assembly
NT_032954 NT_004350 NT_022058 NT_004321 NT_004547 NT_021917 NT_028054 NT_032970
NT_032967 NT_021937 NT_004488 NT_022041 NT_004873 NT_030584 NT_004572 NT_029218
NT_004610 NT_032979 NT_004391 NT_030571 NT_004782 NT_028053 NT_004538 NT_004511
NT_004852 NT_032963 NT_032971 NT_032972 NT_031724 NT_004386 NT_032978 NT_032977
NT_004424 NT_032976 NT_032965 NT_032973 NT_031689 NT_029223 NT_004641 NT_029865
NT_031737 NT_004636 NT_032948 NT_004464 NT_032953 NT_004483 NT_004302 NT_032960
NT_032956 NT_032974 NT_004902 NT_026943 NT_029231 NT_004658 NT_004686 NT_021979
NT_030565 NT_028050 NT_004308 NT_004623 NT_030567 NT_032957 NT_021977 NT_029860
NT_019273 NT_031697 NT_004754 NT_032961 NT_032975 NT_022052 NT_022071 NT_004434
NT_032962 NT_021907 NT_004441 NT_030577 NT_004858 NT_019291 NT_031708 NT_029226
NT_026945 NT_004982 NT_032952 NT_004668 NT_029874 NT_004487 NT_032958 NT_004599
NT_031716 NT_004671 NT_021909 NT_004416 NT_029862 NT_021905 NT_032947 NT_021877
NT_004612 NT_031718 NT_032950 NT_004525 NT_032955 NT_029863 NT_032951 NT_021953
NT_004861 NT_031696 NT_004908 NT_004559 NT_031728 NT_021973 NT_004753 NT_004433
NT_030561 NT_004836 NT_031685 NT_004771 NT_004734 NT_031700 NT_031719 NT_004536
NT_032964 NT_031732 NT_032966 NT_031730 NT_029870 NT_032969 NT_032968


  NT_004547
 
LinksContig1Acc1Start1PhsChr2Contig2Acc2Start2PhsStrong OverlapMedium OverlapWeak OverlapTotal Overlap
S/G/Y/R/B/O NT_004547AC08383038192451chr1NT_004547AL61193339240791843511568085919
S/G/Y/R/B/O NT_004547AL61193339240791chr1NT_004547AC025549393077417575529851275891498
S/G/Y/R/B/O NT_004547AL61193339240791chr1NT_004547AL59191640691663450960045096
S/G/Y/R/B/O NT_004547AL61193339240791  AC024517392407912012110839105532015
S/G/Y/R/B/O NT_004547AC02554939307741chr1NT_004547AL5919164069166382275927717796109348
S/G/Y/R/B/O NT_004547AC02554939307741  AC02139440691661115345696017230
S/G/Y/R/B/O NT_004547AC02554939307741  AC02451740691661347087328527247308
S/G/Y/R/B/O NT_004547AL59191640691663chr1NT_004547AL355602422832530000
S/G/Y/R/B/O NT_004547AL59191640691663chr1NT_004547AL61193339240791450960045096
S/G/Y/R/B/O NT_004547AL59191640691663  AC02139439240791659350065935
S/G/Y/R/B/O NT_004547AL59191640691663  AC02451739240791517931832552074122192
S/G/Y/R/B/O NT_004547AL35560242283253chr1NT_004547Z98747432548830000
S/G/Y/R/B/O NT_004547AL35560242283253  AC02139439240791889590100989968
S/G/Y/R/B/O NT_004547AL35560242283253  AC02451739240791141540203716191
S/G/Y/R/B/O NT_004547AL35560242283253  AC06479839240791516726979058651
S/G/Y/R/B/O NT_004547Z9874743254883chr1NT_004547AL3918084456815300100100
S/G/Y/R/B/O NT_004547Z9874743254883  AC02310039240791465108301054811
S/G/Y/R/B/O NT_004547Z9874743254883  AC06479839240791819392047886292848
S/G/Y/R/B/O NT_004547AL39180844568153chr1NT_004547Z98886448565430000
S/G/Y/R/B/O NT_004547AL39180844568153  AC02310044568151287630028763
S/G/Y/R/B/O NT_004547Z9888644856543chr1NT_004547AL023586454235830000
S/G/Y/R/B/O NT_004547Z9888644856543  AC02310043254881525891722128655597
S/G/Y/R/B/O NT_004547AL02358645423583chr1NT_004547AL137795463389830000
S/G/Y/R/B/O NT_004547AL02358645423583chr1NT_004547AC09366747537041800705342085412
S/G/Y/R/B/O NT_004547AL02358645423583  AC02310043254881378706710044580
S/G/Y/R/B/O NT_004547AL13779546338983chr1NT_004547AC09366747537041868072009088816
S/G/Y/R/B/O NT_004547AC09366747537041         
S/G/Y/R/B/O NT_004547AC09366747537041chr1NT_004547AL02358645423583800705342085412