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  Chromosome 1 - Clone Overlaps - Single Contig
 
Description of this page Main Reports Page Main Assembly Page Main Overlap Page Whole Chromosome Single Contigs

Line color code:

  • White: overlap with immediately succeeding clone
  • Green: overlap with clone in same contig
  • Pink: overlap with clone in same chromosome, different contig
  • Red: overlap with clone on different chromosome
  • Yellow: overlap with clone not used in assembly
NT_032954 NT_004350 NT_022058 NT_004321 NT_004547 NT_021917 NT_028054 NT_032970
NT_032967 NT_021937 NT_004488 NT_022041 NT_004873 NT_030584 NT_004572 NT_029218
NT_004610 NT_032979 NT_004391 NT_030571 NT_004782 NT_028053 NT_004538 NT_004511
NT_004852 NT_032963 NT_032971 NT_032972 NT_031724 NT_004386 NT_032978 NT_032977
NT_004424 NT_032976 NT_032965 NT_032973 NT_031689 NT_029223 NT_004641 NT_029865
NT_031737 NT_004636 NT_032948 NT_004464 NT_032953 NT_004483 NT_004302 NT_032960
NT_032956 NT_032974 NT_004902 NT_026943 NT_029231 NT_004658 NT_004686 NT_021979
NT_030565 NT_028050 NT_004308 NT_004623 NT_030567 NT_032957 NT_021977 NT_029860
NT_019273 NT_031697 NT_004754 NT_032961 NT_032975 NT_022052 NT_022071 NT_004434
NT_032962 NT_021907 NT_004441 NT_030577 NT_004858 NT_019291 NT_031708 NT_029226
NT_026945 NT_004982 NT_032952 NT_004668 NT_029874 NT_004487 NT_032958 NT_004599
NT_031716 NT_004671 NT_021909 NT_004416 NT_029862 NT_021905 NT_032947 NT_021877
NT_004612 NT_031718 NT_032950 NT_004525 NT_032955 NT_029863 NT_032951 NT_021953
NT_004861 NT_031696 NT_004908 NT_004559 NT_031728 NT_021973 NT_004753 NT_004433
NT_030561 NT_004836 NT_031685 NT_004771 NT_004734 NT_031700 NT_031719 NT_004536
NT_032964 NT_031732 NT_032966 NT_031730 NT_029870 NT_032969 NT_032968


  NT_004538
 
LinksContig1Acc1Start1PhsChr2Contig2Acc2Start2PhsStrong OverlapMedium OverlapWeak OverlapTotal Overlap
S/G/Y/R/B/O NT_004538AL645729276666841chr1NT_004538AL3600122767676210000
S/G/Y/R/B/O NT_004538AL645729276666841chr1NT_004538AC02276627864466179170222926533107995
S/G/Y/R/B/O NT_004538AL645729276666841chr1NT_004538AL356786279655043182660018266
S/G/Y/R/B/O NT_004538AL360012276767621chr1NT_004538AL5134972769711626341680551772089191
S/G/Y/R/B/O NT_004538AL360012276767621chr1NT_004538AL7140022785059414762985242919985352
S/G/Y/R/B/O NT_004538AL513497276971162chr1NT_004538AL7140022785059413875701220650963
S/G/Y/R/B/O NT_004538AL714002278505941chr1NT_004538AC022766278644661279551790690436649
S/G/Y/R/B/O NT_004538AL714002278505941chr1NT_004538AL3600122767676214762985242919985352
S/G/Y/R/B/O NT_004538AC022766278644661chr1NT_004538AL3567862796550432557913450105940088
S/G/Y/R/B/O NT_004538AC022766278644661chr1NT_004538AL64572927666684179170222926533107995
S/G/Y/R/B/O NT_004538AL356786279655043chr1NT_004538AL0091812802893230199901999
S/G/Y/R/B/O NT_004538AL356786279655043chr1NT_004538AL645729276666841182660018266
S/G/Y/R/B/O NT_004538AL009181280289323chr1NT_004538AL1387852817547232000002000
S/G/Y/R/B/O NT_004538AL009181280289323  AC021602276666841724134803077216
S/G/Y/R/B/O NT_004538AL009181280289323  AC023527276666841767361213839283128157
S/G/Y/R/B/O NT_004538AL138785281754723chr1NT_004538AL3575002828308130199801998
S/G/Y/R/B/O NT_004538AL138785281754723  AC02352727965504125941205464128636
S/G/Y/R/B/O NT_004538AL357500282830813chr1NT_004538AL5907292839347332000002000
S/G/Y/R/B/O NT_004538AL357500282830813  AC004236282830813240390024039
S/G/Y/R/B/O NT_004538AL357500282830813  AC025145282830811764078618085025
S/G/Y/R/B/O NT_004538AL357500282830813  AL3549862817547214359902447068069
S/G/Y/R/B/O NT_004538AL357500282830813  AL513012281754721644530755672009
S/G/Y/R/B/O NT_004538AL590729283934733chr1NT_004538AL6458592846264732000002000
S/G/Y/R/B/O NT_004538AL590729283934733  AC004236283934733214910021491
S/G/Y/R/B/O NT_004538AL590729283934733  AC025145283934731562101564105058824
S/G/Y/R/B/O NT_004538AL590729283934733  AL51301228283081110479125851485037914
S/G/Y/R/B/O NT_004538AL645859284626473chr1NT_004538AL0495702850090332000002000
S/G/Y/R/B/O NT_004538AL645859284626473  AL513012285009031138508990806630906
S/G/Y/R/B/O NT_004538AL049570285009033chr1NT_004538AL1391512861928830000
S/G/Y/R/B/O NT_004538AL049570285009033chr1NT_004538AL671862286976752782080078208
S/G/Y/R/B/O NT_004538AL139151286192883chr1NT_004538AL671862286976752007974679746
S/G/Y/R/B/O NT_004538AL671862286976752         
S/G/Y/R/B/O NT_004538AL671862286976752chr1NT_004538AL049570285009033782080078208
S/G/Y/R/B/O NT_004538AL671862286976752  AL714008286192881194790019479