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  Chromosome 1 - Clone Overlaps - Single Contig
 
Description of this page Main Reports Page Main Assembly Page Main Overlap Page Whole Chromosome Single Contigs

Line color code:

  • White: overlap with immediately succeeding clone
  • Green: overlap with clone in same contig
  • Pink: overlap with clone in same chromosome, different contig
  • Red: overlap with clone on different chromosome
  • Yellow: overlap with clone not used in assembly

NT_032954 NT_004350 NT_022058 NT_004321 NT_004547 NT_021917 NT_028054 NT_032970
NT_032967 NT_021937 NT_004488 NT_022041 NT_004873 NT_030584 NT_004572 NT_029218
NT_004610 NT_032979 NT_004391 NT_030571 NT_004782 NT_028053 NT_004538 NT_004511
NT_004852 NT_032963 NT_032971 NT_032972 NT_031724 NT_004386 NT_032978 NT_032977
NT_004424 NT_032976 NT_032965 NT_032973 NT_031689 NT_029223 NT_004641 NT_029865
NT_031737 NT_004636 NT_032948 NT_004464 NT_032953 NT_004483 NT_004302 NT_032960
NT_032956 NT_032974 NT_004902 NT_026943 NT_029231 NT_004658 NT_004686 NT_021979
NT_030565 NT_028050 NT_004308 NT_004623 NT_030567 NT_032957 NT_021977 NT_029860
NT_019273 NT_031697 NT_004754 NT_032961 NT_032975 NT_022052 NT_022071 NT_004434
NT_032962 NT_021907 NT_004441 NT_030577 NT_004858 NT_019291 NT_031708 NT_029226
NT_026945 NT_004982 NT_032952 NT_004668 NT_029874 NT_004487 NT_032958 NT_004599
NT_031716 NT_004671 NT_021909 NT_004416 NT_029862 NT_021905 NT_032947 NT_021877
NT_004612 NT_031718 NT_032950 NT_004525 NT_032955 NT_029863 NT_032951 NT_021953
NT_004861 NT_031696 NT_004908 NT_004559 NT_031728 NT_021973 NT_004753 NT_004433
NT_030561 NT_004836 NT_031685 NT_004771 NT_004734 NT_031700 NT_031719 NT_004536
NT_032964 NT_031732 NT_032966 NT_031730 NT_029870 NT_032969 NT_032968


  NT_019273
 
LinksContig1Acc1Start1PhsChr2Contig2Acc2Start2PhsStrong OverlapMedium OverlapWeak OverlapTotal Overlap
S/G/Y/R/B/O NT_019273AC0192251109964481chr1NT_019273AL35581711099778830000
S/G/Y/R/B/O NT_019273AC0192251109964481chr1NT_019273AL1377901112304993513096805264260756
S/G/Y/R/B/O NT_019273AC0192251109964481chr1NT_019273AL1600061110933783769332775390583613
S/G/Y/R/B/O NT_019273AC0192251109964481chr1NT_019273AL3559901111851613408404512045352
S/G/Y/R/B/O NT_019273AC0192251109964481chr1NT_019273AL36017111101394118861342989762102673
S/G/Y/R/B/O NT_019273AL3558171109977883chr1NT_019273AL36017111101394112000002000
S/G/Y/R/B/O NT_019273AL3601711110139411chr1NT_019273AL1600061110933783916640091664
S/G/Y/R/B/O NT_019273AL3601711110139411chr1NT_019273AC01922511099644818861342989762102673
S/G/Y/R/B/O NT_019273AL3601711110139411chr1NT_019273AL3559901111851613123370012337
S/G/Y/R/B/O NT_019273AL1600061110933783chr1NT_019273AL35599011118516130000
S/G/Y/R/B/O NT_019273AL1600061110933783chr1NT_019273AC0192251109964481769332775390583613
S/G/Y/R/B/O NT_019273AL3559901111851613chr1NT_019273AL13779011123049930000
S/G/Y/R/B/O NT_019273AL3559901111851613chr1NT_019273AC0192251109964481408404512045352
S/G/Y/R/B/O NT_019273AL3559901111851613chr1NT_019273AL3601711110139411123370012337
S/G/Y/R/B/O NT_019273AL1377901112304993chr1NT_019273AC0259871113559081348370034837
S/G/Y/R/B/O NT_019273AL1377901112304993chr1NT_019273AC0192251109964481513096805264260756
S/G/Y/R/B/O NT_019273AL1377901112304993chr1NT_019273AC0685191113922001189011695020596
S/G/Y/R/B/O NT_019273AL1377901112304993  AL3554881113922001448940044894
S/G/Y/R/B/O NT_019273AC0259871113559081chr1NT_019273AC06851911139220017779816175093973
S/G/Y/R/B/O NT_019273AC0259871113559081chr1NT_019273AL3907971137612593332401604034844
S/G/Y/R/B/O NT_019273AC0259871113559081  AL355488111230499114630345240150827
S/G/Y/R/B/O NT_019273AC0685191113922001chr1NT_019273AC01118411140153610000
S/G/Y/R/B/O NT_019273AC0685191113922001chr1NT_019273AL1377901112304993189011695020596
S/G/Y/R/B/O NT_019273AC0685191113922001chr1NT_019273AL3582151138235303380917915114147147
S/G/Y/R/B/O NT_019273AC0685191113922001chr1NT_019273AL3907971137612593302843240106534589
S/G/Y/R/B/O NT_019273AC0685191113922001  AL355488111230499187376134357583108394
S/G/Y/R/B/O NT_019273AC0111841114015361chr1NT_019273AL12198211152985230000
S/G/Y/R/B/O NT_019273AL1219821115298523chr1NT_019273AL36531811163263230199801998
S/G/Y/R/B/O NT_019273AL1219821115298523  AL1588421139230591653860065386
S/G/Y/R/B/O NT_019273AL3653181116326323chr1NT_019273AL35713711173020730199601996
S/G/Y/R/B/O NT_019273AL3653181116326323  AC0250781116326321325030032503
S/G/Y/R/B/O NT_019273AL3653181116326323  AL1588421115298521418710041871
S/G/Y/R/B/O NT_019273AL3571371117302073chr1NT_019273AL44926411183047430000
S/G/Y/R/B/O NT_019273AL3571371117302073  AC0250781117302071945661575096141
S/G/Y/R/B/O NT_019273AL3571371117302073  AL3652621117302071647225818070540
S/G/Y/R/B/O NT_019273AL4492641118304743chr1NT_019273AL45038911199040324724004724
S/G/Y/R/B/O NT_019273AL4492641118304743  AC0250781116326321316124027035639
S/G/Y/R/B/O NT_019273AL4492641118304743  AL3652621116326321753942543717485111
S/G/Y/R/B/O NT_019273AL4503891119904032chr1NT_019273AL59243611209002630000
S/G/Y/R/B/O NT_019273AL4503891119904032  AL6065291118304743668220066822
S/G/Y/R/B/O NT_019273AL5924361120900263chr1NT_019273AP0013931121868081364260036426
S/G/Y/R/B/O NT_019273AP0013931121868081chr1NT_019273AL1579501121891453472920047292
S/G/Y/R/B/O NT_019273AP0013931121868081chr1NT_019273AL512638112235227211651905670122189
S/G/Y/R/B/O NT_019273AL1579501121891453chr1NT_019273AL51263811223522722000002000
S/G/Y/R/B/O NT_019273AL5126381122352272chr1NT_019273AL60649911241029330000
S/G/Y/R/B/O NT_019273AL5126381122352272chr1NT_019273AP001393112186808111651905670122189
S/G/Y/R/B/O NT_019273AL6064991124102933chr1NT_019273AL04982511243105532000002000
S/G/Y/R/B/O NT_019273AL0498251124310553chr1NT_019273AL13942811254557630000
S/G/Y/R/B/O NT_019273AL0498251124310553  AL3901201124310551455277221052748
S/G/Y/R/B/O NT_019273AL0498251124310553  V015111124102933104230010423
S/G/Y/R/B/O NT_019273AL1394281125455763chr1NT_019273AL10966011258725532000002000
S/G/Y/R/B/O NT_019273AL1394281125455763  AL3901201125872551371300037130
S/G/Y/R/B/O NT_019273AL1096601125872553chr1NT_019273AL64550211272481832000002000
S/G/Y/R/B/O NT_019273AL1096601125872553  AL3901201125455761552186702061920
S/G/Y/R/B/O NT_019273AL6455021127248183chr1NT_019273AL35837211274856332000002000
S/G/Y/R/B/O NT_019273AL3583721127485633chr1NT_019273AL39023511290238230000
S/G/Y/R/B/O NT_019273AL3583721127485633  AL138783112748563311788500117885
S/G/Y/R/B/O NT_019273AL3583721127485633  AL6272071127485631365220036522
S/G/Y/R/B/O NT_019273AL3902351129023823chr1NT_019273AL09677311292348530199801998
S/G/Y/R/B/O NT_019273AL3902351129023823  AL6272071129234851144401352636822160
S/G/Y/R/B/O NT_019273AL0967731129234853chr1NT_019273AL13338211306359230000
S/G/Y/R/B/O NT_019273AL0967731129234853  AL62720711290238212053006789988429
S/G/Y/R/B/O NT_019273AL1333821130635923chr1NT_019273AL39024111314491130000
S/G/Y/R/B/O NT_019273AL1333821130635923  AC0234111129023821439780043978
S/G/Y/R/B/O NT_019273AL1333821130635923  AC0534731129023821298310029831
S/G/Y/R/B/O NT_019273AL3902411131449113chr1NT_019273AL03541011326831230000
S/G/Y/R/B/O NT_019273AL3902411131449113  AC023411112902382111973600119736
S/G/Y/R/B/O NT_019273AL3902411131449113  AC0534731129023821782551387114557106683
S/G/Y/R/B/O NT_019273AL3902411131449113  AL3910601129023821817010081701
S/G/Y/R/B/O NT_019273AL0354101132683123chr1NT_019273AL51229111341076430000
S/G/Y/R/B/O NT_019273AL0354101132683123  AC0256311129023821821120082112
S/G/Y/R/B/O NT_019273AL0354101132683123  AL391060112902382114268900142689
S/G/Y/R/B/O NT_019273AL5122911134107643chr1NT_019273AL12199911341227130000
S/G/Y/R/B/O NT_019273AL1219991134122713chr1NT_019273AL16259411354966130000
S/G/Y/R/B/O NT_019273AL1219991134122713  AC02355111290238216803326261367184330
S/G/Y/R/B/O NT_019273AL1219991134122713  AC0256311129023821765930076593
S/G/Y/R/B/O NT_019273AL1625941135496613chr1NT_019273AL59174211366175930200002000
S/G/Y/R/B/O NT_019273AL1625941135496613  AC02355111290238216802087101076187491
S/G/Y/R/B/O NT_019273AL5917421136617593chr1NT_019273AC0270741137478081775194953082472
S/G/Y/R/B/O NT_019273AC0270741137478081chr1NT_019273AL39079711376125930000
S/G/Y/R/B/O NT_019273AC0270741137478081chr1NT_019273AL1378561171624483215982685303727320
S/G/Y/R/B/O NT_019273AL3907971137612593chr1NT_019273AL35821511382353030000
S/G/Y/R/B/O NT_019273AL3907971137612593chr1NT_019273AC0259871113559081332401604034844
S/G/Y/R/B/O NT_019273AL3907971137612593chr1NT_019273AC0685191113922001302843240106534589
S/G/Y/R/B/O NT_019273AL3907971137612593  AL3554881113922001493120049312
S/G/Y/R/B/O NT_019273AL3582151138235303chr1NT_019273AL36536111392305932000002000
S/G/Y/R/B/O NT_019273AL3582151138235303chr1NT_019273AC0685191113922001380917915114147147
S/G/Y/R/B/O NT_019273AL3653611139230593chr1NT_019273AL13637411407640230000
S/G/Y/R/B/O NT_019273AL3653611139230593  AL5134691138235301854670085467
S/G/Y/R/B/O NT_019273AL1363741140764023chr1NT_019273AL354713114196155300100100
S/G/Y/R/B/O NT_019273AL1363741140764023  AC0253751138235301999750778100753
S/G/Y/R/B/O NT_019273AL3547131141961553chr1NT_019273AL39106411425052630000
S/G/Y/R/B/O NT_019273AL3547131141961553  AC025375114196155150047261269853357
S/G/Y/R/B/O NT_019273AL3547131141961553  AC0680271141961551406820355144233
S/G/Y/R/B/O NT_019273AL3910641142505263chr1NT_019273AL36027011427993330000
S/G/Y/R/B/O NT_019273AL3910641142505263  AC0680271140764021280230028023
S/G/Y/R/B/O NT_019273AL3602701142799333chr1NT_019273AL35581611445263820000
S/G/Y/R/B/O NT_019273AL3602701142799333  AC0133271140764021918590091859
S/G/Y/R/B/O NT_019273AL3602701142799333  AC0133871140764021636911820108266593
S/G/Y/R/B/O NT_019273AL3602701142799333  AC06802711407640215417441822470883064
S/G/Y/R/B/O NT_019273AL3602701142799333  AL3899171140764021669052835069740
S/G/Y/R/B/O NT_019273AL3602701142799333  AL3917271140764021479680047968
S/G/Y/R/B/O NT_019273AL3558161144526382chr1NT_019273AL51320211458948430199801998
S/G/Y/R/B/O NT_019273AL3558161144526382  AC0133271140764021779610077961
S/G/Y/R/B/O NT_019273AL3558161144526382  AC0133871140764021860911561144889100
S/G/Y/R/B/O NT_019273AL3558161144526382  AL1391541140764021720674298695883323
S/G/Y/R/B/O NT_019273AL3558161144526382  AL3899171140764021510190051019
S/G/Y/R/B/O NT_019273AL3558161144526382  AL3917271140764021921000092100
S/G/Y/R/B/O NT_019273AL5132021145894843chr1NT_019273AL35638711468122430199601996
S/G/Y/R/B/O NT_019273AL5132021145894843  AL1391541145894841208519829973440414
S/G/Y/R/B/O NT_019273AL3563871146812243chr1NT_019273AL39019511477079330199801998
S/G/Y/R/B/O NT_019273AL3901951147707933chr1NT_019273AL39106311491990030199601996
S/G/Y/R/B/O NT_019273AL3901951147707933  AL35763311468122414876702646375230
S/G/Y/R/B/O NT_019273AL3910631149199003chr1NT_019273AL13901211497684332000002000
S/G/Y/R/B/O NT_019273AL3910631149199003  AL3576331149768431531922291055483
S/G/Y/R/B/O NT_019273AL1390121149768433chr1NT_019273AL04955711501839430000
S/G/Y/R/B/O NT_019273AL1390121149768433  AL3576331147707931351910188237073
S/G/Y/R/B/O NT_019273AL0495571150183943chr1NT_019273AL45099711514477130000
S/G/Y/R/B/O NT_019273AL0495571150183943  AC022181114919900156040245166959160
S/G/Y/R/B/O NT_019273AL0495571150183943  AL3571441149199001170310017031
S/G/Y/R/B/O NT_019273AL0495571150183943  AL3576331149199001145350014535
S/G/Y/R/B/O NT_019273AL4509971151447713chr1NT_019273AL39007011527136330000
S/G/Y/R/B/O NT_019273AL4509971151447713  AC0160391149199001285280028528
S/G/Y/R/B/O NT_019273AL4509971151447713  AC0221811149199001757367512115284400
S/G/Y/R/B/O NT_019273AL4509971151447713  AL3571441149199001103143104213490117054
S/G/Y/R/B/O NT_019273AL4509971151447713  AL5921431149199002238900023890
S/G/Y/R/B/O NT_019273AL3900701152713633chr1NT_019273AL51266511533525320000
S/G/Y/R/B/O NT_019273AL3900701152713633  AC0160391149199001372450037245
S/G/Y/R/B/O NT_019273AL3900701152713633  AL5921431149199002661980066198
S/G/Y/R/B/O NT_019273AL3900701152713633  AP0018341149199001261354974391535024
S/G/Y/R/B/O NT_019273AL5126651153352532chr1NT_019273AL35711411550485230000
S/G/Y/R/B/O NT_019273AL5126651153352532chr1NT_019273AC0157301159985991902910748597776
S/G/Y/R/B/O NT_019273AL5126651153352532  AC0135201149199001244101611251528536
S/G/Y/R/B/O NT_019273AL5126651153352532  AC0160391159985991596200059620
S/G/Y/R/B/O NT_019273AL5126651153352532  AC016081115998599165949167237550105171
S/G/Y/R/B/O NT_019273AL5126651153352532  AL592143222871412986620098662
S/G/Y/R/B/O NT_019273AL5126651153352532  AP00183430913801176683204306075103188
S/G/Y/R/B/O NT_019273AL3571141155048523chr1NT_019273AL44542611550870330199701997
S/G/Y/R/B/O NT_019273AL4454261155087033chr1NT_019273AL59152111566582130000
S/G/Y/R/B/O NT_019273AL4454261155087033chr1NT_019273AC0157301159985991398640039864
S/G/Y/R/B/O NT_019273AL4454261155087033chr1NT_032979AL590728222871411117845028248419296
S/G/Y/R/B/O NT_019273AL4454261155087033  AC01352011550870311015683920337105825
S/G/Y/R/B/O NT_019273AL4454261155087033  AC0160811159985991429750042975
S/G/Y/R/B/O NT_019273AL5915211156658213chr1NT_019273AL45040711576093130000
S/G/Y/R/B/O NT_019273AL5915211156658213  AL3900622228714114424502714771392
S/G/Y/R/B/O NT_019273AL4504071157609313chr1NT_019273AL35476011577703730000
S/G/Y/R/B/O NT_019273AL4504071157609313  AL645737222871412180570018057
S/G/Y/R/B/O NT_019273AL3547601157770373chr1NT_019273AL10993211588701330000
S/G/Y/R/B/O NT_019273AL3547601157770373  AL39006222287141111002800110028
S/G/Y/R/B/O NT_019273AL3547601157770373  AL645737222871412382580038258
S/G/Y/R/B/O NT_019273AL1099321158870133chr1NT_019273AC02448111598435513494466781741559037
S/G/Y/R/B/O NT_019273AC0244811159843551chr1NT_019273AC01573011599859910000
S/G/Y/R/B/O NT_019273AC0244811159843551chr1NT_019273AL6038321160196801309469025984349814
S/G/Y/R/B/O NT_019273AC0157301159985991chr1NT_019273AL60383211601968010000
S/G/Y/R/B/O NT_019273AC0157301159985991chr1NT_019273AL4454261155087033398640039864
S/G/Y/R/B/O NT_019273AC0157301159985991chr1NT_019273AL5126651153352532902910748597776
S/G/Y/R/B/O NT_019273AC0157301159985991chr1NT_032979AL590728222871411155965708450925813
S/G/Y/R/B/O NT_019273AC0157301159985991  AC0135201160196801227750249025265
S/G/Y/R/B/O NT_019273AC0157301159985991  AC01608111601968015795201621374165
S/G/Y/R/B/O NT_019273AC0157301159985991  AL592143222871412379340215340087
S/G/Y/R/B/O NT_019273AC0157301159985991  AP001834309138011296134013305036676
S/G/Y/R/B/O NT_019273AL6038321160196801chr1NT_019273AL672077116145337174120792615338
S/G/Y/R/B/O NT_019273AL6038321160196801chr1NT_019273AC0244811159843551309469025984349814
S/G/Y/R/B/O NT_019273AL6038321160196801  AC1109931159843551125170394916466
S/G/Y/R/B/O NT_019273AL6720771161453371chr1NT_019273AL3907291162097173114250011425
S/G/Y/R/B/O NT_019273AL6720771161453371chr1NT_019273AL1588441162793733272780027278
S/G/Y/R/B/O NT_019273AL6720771161453371  AC1109931161453371437850043785
S/G/Y/R/B/O NT_019273AL6720771161453371  AJ4389451161453373172920017292
S/G/Y/R/B/O NT_019273AL6720771161453371  AL3903151162793731352614618039879
S/G/Y/R/B/O NT_019273AL3907291162097173chr1NT_019273AL15884411627937330000
S/G/Y/R/B/O NT_019273AL3907291162097173  AC1109931160196801156420015642
S/G/Y/R/B/O NT_019273AL3907291162097173  AL3903151160196801260064617030623
S/G/Y/R/B/O NT_019273AL1588441162793733chr1NT_019273AL39024211633077530000
S/G/Y/R/B/O NT_019273AL1588441162793733chr1NT_019273AL6720771161453371272780027278
S/G/Y/R/B/O NT_019273AL1588441162793733  AC1109931161453371533710053371
S/G/Y/R/B/O NT_019273AL3902421163307753chr1NT_019273AL35705511639955820199301993
S/G/Y/R/B/O NT_019273AL3902421163307753  AC0062861161453372320440032044
S/G/Y/R/B/O NT_019273AL3902421163307753  AL3903151163995581231972626025823
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S/G/Y/R/B/O NT_019273AL3653211171235573chr1NT_019273AL13785611716244830199901999
S/G/Y/R/B/O NT_019273AL3653211171235573  AC0244631169266401325980032598
S/G/Y/R/B/O NT_019273AL1378561171624483         
S/G/Y/R/B/O NT_019273AL1378561171624483chr1NT_019273AC0270741137478081215982685303727320