Chromosome 1 - Clone Overlaps

Chromosome 1 - Clone Overlaps - Single Contig

Description of this page

Line color code:

White: overlap with immediately succeeding clone
Green: overlap with clone in same contig
Pink: overlap with clone in same chromosome, different contig
Red: overlap with clone on different chromosome
Yellow: overlap with clone not used in assembly

NT_032954	NT_004350	NT_022058	NT_004321	NT_004547	NT_021917	NT_028054	NT_032970
NT_032967	NT_021937	NT_004488	NT_022041	NT_004873	NT_030584	NT_004572	NT_029218
NT_004610	NT_032979	NT_004391	NT_030571	NT_004782	NT_028053	NT_004538	NT_004511
NT_004852	NT_032963	NT_032971	NT_032972	NT_031724	NT_004386	NT_032978	NT_032977
NT_004424	NT_032976	NT_032965	NT_032973	NT_031689	NT_029223	NT_004641	NT_029865
NT_031737	NT_004636	NT_032948	NT_004464	NT_032953	NT_004483	NT_004302	NT_032960
NT_032956	NT_032974	NT_004902	NT_026943	NT_029231	NT_004658	NT_004686	NT_021979
NT_030565	NT_028050	NT_004308	NT_004623	NT_030567	NT_032957	NT_021977	NT_029860
NT_019273	NT_031697	NT_004754	NT_032961	NT_032975	NT_022052	NT_022071	NT_004434
NT_032962	NT_021907	NT_004441	NT_030577	NT_004858	NT_019291	NT_031708	NT_029226
NT_026945	NT_004982	NT_032952	NT_004668	NT_029874	NT_004487	NT_032958	NT_004599
NT_031716	NT_004671	NT_021909	NT_004416	NT_029862	NT_021905	NT_032947	NT_021877
NT_004612	NT_031718	NT_032950	NT_004525	NT_032955	NT_029863	NT_032951	NT_021953
NT_004861	NT_031696	NT_004908	NT_004559	NT_031728	NT_021973	NT_004753	NT_004433
NT_030561	NT_004836	NT_031685	NT_004771	NT_004734	NT_031700	NT_031719	NT_004536
NT_032964	NT_031732	NT_032966	NT_031730	NT_029870	NT_032969	NT_032968

NT_004511

Links	Contig1	Acc1	Start1	Phs	Chr2	Contig2	Acc2	Start2	Phs	Strong Overlap	Medium Overlap	Weak Overlap	Total Overlap
S/G/Y/R/B/O	NT_004511	AC023225	28807755	1	chr1	NT_004511	AL390839	28812725	1	0	0	0	0
S/G/Y/R/B/O	NT_004511	AC023225	28807755	1	chr1	NT_004511	AC104336	28938313	1	95772	0	31901	127673
S/G/Y/R/B/O	NT_004511	AC023225	28807755	1	chr1	NT_004511	AL513220	29043951	2	27957	0	0	27957
S/G/Y/R/B/O	NT_004511	AC023225	28807755	1			AC022557	115038156	1	51458	0	0	51458
S/G/Y/R/B/O	NT_004511	AC023225	28807755	1			AL513473	29043951	1	78861	2857	8587	90305
S/G/Y/R/B/O	NT_004511	AL390839	28812725	1	chr1	NT_004511	AL603790	28820441	1	0	0	0	0
S/G/Y/R/B/O	NT_004511	AL390839	28812725	1	chr1	NT_004511	AC021886	29951372	1	145401	0	0	145401
S/G/Y/R/B/O	NT_004511	AL390839	28812725	1	chr1	NT_004511	AC024688	30141200	1	55937	0	0	55937
S/G/Y/R/B/O	NT_004511	AL390839	28812725	1	chr1	NT_004511	AL162259	30150432	3	30402	0	0	30402
S/G/Y/R/B/O	NT_004511	AL390839	28812725	1			AL139158	15051187	2	40885	0	0	40885
S/G/Y/R/B/O	NT_004511	AL603790	28820441	1	chr1	NT_004511	AC104336	28938313	1	0	0	0	0
S/G/Y/R/B/O	NT_004511	AL603790	28820441	1	chr1	NT_004511	AC021886	29951372	1	34553	0	0	34553
S/G/Y/R/B/O	NT_004511	AL603790	28820441	1	chr1	NT_004636	AL139147	66744870	3	34076	26785	2530	63391
S/G/Y/R/B/O	NT_004511	AL603790	28820441	1			AC022557	29951372	1	41838	0	0	41838
S/G/Y/R/B/O	NT_004511	AL603790	28820441	1			AL137158	20877652	1	22626	7354	2530	32510
S/G/Y/R/B/O	NT_004511	AL603790	28820441	1			AL139158	66744870	2	49677	0	0	49677
S/G/Y/R/B/O	NT_004511	AC104336	28938313	1	chr1	NT_004511	AL513220	29043951	2	28708	0	0	28708
S/G/Y/R/B/O	NT_004511	AC104336	28938313	1	chr1	NT_004511	AC023225	28807755	1	95772	0	31901	127673
S/G/Y/R/B/O	NT_004511	AC104336	28938313	1			AC022557	66840324	1	15129	0	0	15129
S/G/Y/R/B/O	NT_004511	AC104336	28938313	1			AL513473	29043951	1	70809	2951	8386	82146
S/G/Y/R/B/O	NT_004511	AL513220	29043951	2	chr1	NT_004511	AL034379	29163440	3	71459	0	0	71459
S/G/Y/R/B/O	NT_004511	AL513220	29043951	2	chr1	NT_004511	AC023225	28807755	1	27957	0	0	27957
S/G/Y/R/B/O	NT_004511	AL513220	29043951	2			AL355880	29163440	1	74636	0	0	74636
S/G/Y/R/B/O	NT_004511	AL034379	29163440	3	chr1	NT_004511	AL449284	29273664	3	0	0	0	0
S/G/Y/R/B/O	NT_004511	AL034379	29163440	3			AL355880	29163440	1	112110	0	0	112110
S/G/Y/R/B/O	NT_004511	AL449284	29273664	3	chr1	NT_004511	AL033524	29329393	3	0	1991	0	1991
S/G/Y/R/B/O	NT_004511	AL449284	29273664	3			AL355880	29329393	1	34731	0	0	34731
S/G/Y/R/B/O	NT_004511	AL033524	29329393	3	chr1	NT_004511	AL353604	29431021	3	0	0	0	0
S/G/Y/R/B/O	NT_004511	AL353604	29431021	3	chr1	NT_004511	AL590127	29492418	3	0	1999	0	1999
S/G/Y/R/B/O	NT_004511	AL590127	29492418	3	chr1	NT_004511	AL031430	29531882	3	0	1999	0	1999
S/G/Y/R/B/O	NT_004511	AL031430	29531882	3	chr1	NT_004511	AL355386	29691063	3	0	0	0	0
S/G/Y/R/B/O	NT_004511	AL031430	29531882	3	chr1	NT_004511	AC027191	29924025	1	102529	20040	2005	124574
S/G/Y/R/B/O	NT_004511	AL031430	29531882	3			AL359635	29924025	1	24164	16692	0	40856
S/G/Y/R/B/O	NT_004511	AL031430	29531882	3			AL359966	29924025	1	50775	0	0	50775
S/G/Y/R/B/O	NT_004511	AL031430	29531882	3			AL591380	29492418	1	53408	15816	0	69224
S/G/Y/R/B/O	NT_004511	AL355386	29691063	3	chr1	NT_004511	AL591883	29822303	3	0	0	0	0
S/G/Y/R/B/O	NT_004511	AL355386	29691063	3	chr1	NT_004511	AC026542	29830090	1	97016	2552	0	99568
S/G/Y/R/B/O	NT_004511	AL355386	29691063	3	chr1	NT_004511	AC027191	29924025	1	23775	3243	1176	28194
S/G/Y/R/B/O	NT_004511	AL355386	29691063	3			AL359635	29924025	1	50253	14460	6096	70809
S/G/Y/R/B/O	NT_004511	AL355386	29691063	3			AL359966	29924025	1	74597	5303	19150	99050
S/G/Y/R/B/O	NT_004511	AL591883	29822303	3	chr1	NT_004511	AC026542	29830090	1	7787	0	0	7787
S/G/Y/R/B/O	NT_004511	AC026542	29830090	1	chr1	NT_004511	AL139419	29839128	1	72046	5411	2028	79485
S/G/Y/R/B/O	NT_004511	AC026542	29830090	1	chr1	NT_004511	AL355386	29691063	3	97016	2552	0	99568
S/G/Y/R/B/O	NT_004511	AC026542	29830090	1			AL359635	29691063	1	17700	11886	3248	32834
S/G/Y/R/B/O	NT_004511	AC026542	29830090	1			AL359966	29691063	1	28859	5167	0	34026
S/G/Y/R/B/O	NT_004511	AL139419	29839128	1	chr1	NT_004511	AC027191	29924025	1	0	0	0	0
S/G/Y/R/B/O	NT_004511	AL139419	29839128	1			AL356412	29830090	1	55311	2626	0	57937
S/G/Y/R/B/O	NT_004511	AC027191	29924025	1	chr1	NT_004511	AC021886	29951372	1	0	0	0	0
S/G/Y/R/B/O	NT_004511	AC027191	29924025	1	chr1	NT_004511	AL031430	29531882	3	102529	20040	2005	124574
S/G/Y/R/B/O	NT_004511	AC027191	29924025	1	chr1	NT_004511	AL355386	29691063	3	23775	3243	1176	28194
S/G/Y/R/B/O	NT_004511	AC027191	29924025	1			AL359635	29691063	1	10458	11078	0	21536
S/G/Y/R/B/O	NT_004511	AC027191	29924025	1			AL359966	29691063	1	27643	9290	2177	39110
S/G/Y/R/B/O	NT_004511	AC021886	29951372	1	chr1	NT_004511	AC024688	30141200	1	29795	0	0	29795
S/G/Y/R/B/O	NT_004511	AC021886	29951372	1	chr1	NT_004511	AL390839	28812725	1	145401	0	0	145401
S/G/Y/R/B/O	NT_004511	AC021886	29951372	1	chr1	NT_004511	AL603790	28820441	1	34553	0	0	34553
S/G/Y/R/B/O	NT_004511	AC021886	29951372	1			AL139158	30141200	2	114656	0	0	114656
S/G/Y/R/B/O	NT_004511	AC024688	30141200	1	chr1	NT_004511	AL162259	30150432	3	51059	2270	0	53329
S/G/Y/R/B/O	NT_004511	AC024688	30141200	1	chr1	NT_004511	AL390839	28812725	1	55937	0	0	55937
S/G/Y/R/B/O	NT_004511	AC024688	30141200	1	chr1	NT_004511	AL513479	30216550	3	51705	0	6688	58393
S/G/Y/R/B/O	NT_004511	AC024688	30141200	1			AL390251	30150432	1	27091	4871	1924	33886
S/G/Y/R/B/O	NT_004511	AL162259	30150432	3	chr1	NT_004511	AL513479	30216550	3	0	0	0	0
S/G/Y/R/B/O	NT_004511	AL162259	30150432	3	chr1	NT_004511	AL390839	28812725	1	30402	0	0	30402
S/G/Y/R/B/O	NT_004511	AL162259	30150432	3			AL390251	30141200	1	11105	0	0	11105
S/G/Y/R/B/O	NT_004511	AL513479	30216550	3	chr1	NT_004511	AL355865	30408372	3	0	1998	0	1998
S/G/Y/R/B/O	NT_004511	AL513479	30216550	3	chr1	NT_004511	AC024688	30141200	1	51705	0	6688	58393
S/G/Y/R/B/O	NT_004511	AL513479	30216550	3			AL390251	30408372	1	71130	4876	2095	78101
S/G/Y/R/B/O	NT_004511	AL355865	30408372	3	chr1	NT_004511	AL592526	30480641	3	2000	0	0	2000
S/G/Y/R/B/O	NT_004511	AL592526	30480641	3	chr1	NT_004511	AL139175	30499752	3	2000	0	0	2000
S/G/Y/R/B/O	NT_004511	AL139175	30499752	3	chr1	NT_004511	AL354702	30601470	3	0	1998	0	1998
S/G/Y/R/B/O	NT_004511	AL354702	30601470	3	chr1	NT_004511	AL139260	30706892	3	0	0	0	0
S/G/Y/R/B/O	NT_004511	AL354702	30601470	3			AL139222	30499752	1	63728	0	5235	68963
S/G/Y/R/B/O	NT_004511	AL139260	30706892	3	chr1	NT_004511	AL714019	30860030	1	94335	0	0	94335
S/G/Y/R/B/O	NT_004511	AL139260	30706892	3			AL139222	30499752	1	20660	0	49128	69788
S/G/Y/R/B/O	NT_004511	AL714019	30860030	1	chr1	NT_004511	AC015478	30866905	1	0	0	0	0
S/G/Y/R/B/O	NT_004511	AL714019	30860030	1	chr1	NT_004511	AL606465	30913801	1	30029	2537	10411	42977
S/G/Y/R/B/O	NT_004511	AL714019	30860030	1			AL139015	30860030	1	14188	0	6128	20316
S/G/Y/R/B/O	NT_004511	AC015478	30866905	1	chr1	NT_004511	AL645944	30904443	1	20748	2657	0	23405
S/G/Y/R/B/O	NT_004511	AC015478	30866905	1	chr1	NT_004511	AC092265	30991259	3	102300	0	637	102937
S/G/Y/R/B/O	NT_004511	AL645944	30904443	1	chr1	NT_004511	AL606465	30913801	1	0	2460	0	2460
S/G/Y/R/B/O	NT_004511	AL645944	30904443	1	chr1	NT_004511	AL662906	31285991	1	22076	2027	0	24103
S/G/Y/R/B/O	NT_004511	AL645944	30904443	1			AC027064	30866905	1	16935	1565	0	18500
S/G/Y/R/B/O	NT_004511	AL606465	30913801	1	chr1	NT_004511	AC092265	30991259	3	0	0	0	0
S/G/Y/R/B/O	NT_004511	AL606465	30913801	1	chr1	NT_004511	AL355477	32299492	3	61188	0	0	61188
S/G/Y/R/B/O	NT_004511	AL606465	30913801	1	chr1	NT_004511	AL714019	30860030	1	30029	2537	10411	42977
S/G/Y/R/B/O	NT_004511	AL606465	30913801	1			AC026936	115998599	1	49024	4066	1202	54292
S/G/Y/R/B/O	NT_004511	AL606465	30913801	1			AL139015	115998599	1	88088	0	26286	114374
S/G/Y/R/B/O	NT_004511	AC092265	30991259	3	chr1	NT_004511	AL662906	31285991	1	0	2660	0	2660
S/G/Y/R/B/O	NT_004511	AC092265	30991259	3	chr1	NT_004511	AC015478	30866905	1	102300	0	637	102937
S/G/Y/R/B/O	NT_004511	AL662906	31285991	1	chr1	NT_004511	AL137076	31416006	3	34001	0	0	34001
S/G/Y/R/B/O	NT_004511	AL662906	31285991	1	chr1	NT_004511	AL645944	30904443	1	22076	2027	0	24103
S/G/Y/R/B/O	NT_004511	AL662906	31285991	1			AC027064	30866905	1	141355	10092	6759	158206
S/G/Y/R/B/O	NT_004511	AL137076	31416006	3	chr1	NT_004511	AL109740	31505265	3	0	0	0	0
S/G/Y/R/B/O	NT_004511	AL137076	31416006	3			AC027064	30904443	1	15775	2054	0	17829
S/G/Y/R/B/O	NT_004511	AL137076	31416006	3			AL121991	30904443	1	12024	11629	11407	35060
S/G/Y/R/B/O	NT_004511	AL109740	31505265	3	chr1	NT_004511	AL021921	31568846	3	2000	0	0	2000
S/G/Y/R/B/O	NT_004511	AL109740	31505265	3			U95738	31568846	3	13449	0	0	13449
S/G/Y/R/B/O	NT_004511	AL021921	31568846	3	chr1	NT_004511	AL161638	31701352	3	0	0	100	100
S/G/Y/R/B/O	NT_004511	AL021921	31568846	3			U95738	31701352	3	134323	0	0	134323
S/G/Y/R/B/O	NT_004511	AL161638	31701352	3	chr1	NT_004511	AL591901	31805763	3	0	0	0	0
S/G/Y/R/B/O	NT_004511	AL161638	31701352	3			AC023412	31701352	1	18168	2074	0	20242
S/G/Y/R/B/O	NT_004511	AL161638	31701352	3			U95738	31568846	3	25394	0	0	25394
S/G/Y/R/B/O	NT_004511	AL591901	31805763	3	chr1	NT_004511	AL137857	31933607	2	0	0	0	0
S/G/Y/R/B/O	NT_004511	AL591901	31805763	3			AC023412	31568846	1	76533	6570	1845	84948
S/G/Y/R/B/O	NT_004511	AL591901	31805763	3			AC026011	31568846	1	102581	0	24557	127138
S/G/Y/R/B/O	NT_004511	AL137857	31933607	2	chr1	NT_004511	AL137027	32083649	3	0	0	0	0
S/G/Y/R/B/O	NT_004511	AL137857	31933607	2			AC026011	31568846	1	63915	4337	0	68252
S/G/Y/R/B/O	NT_004511	AL137857	31933607	2			AC078821	31568846	1	143490	0	0	143490
S/G/Y/R/B/O	NT_004511	AL137027	32083649	3	chr1	NT_004511	AL445235	32182791	1	0	0	0	0
S/G/Y/R/B/O	NT_004511	AL137027	32083649	3			AL591412	31568846	1	101103	0	0	101103
S/G/Y/R/B/O	NT_004511	AL445235	32182791	1	chr1	NT_004511	AL355477	32299492	3	0	0	0	0
S/G/Y/R/B/O	NT_004511	AL445235	32182791	1	chr1	NT_004511	AL356320	33482835	1	16480	2004	0	18484
S/G/Y/R/B/O	NT_004511	AL445235	32182791	1			AL365174	33482835	1	90740	7641	11322	109703
S/G/Y/R/B/O	NT_004511	AL445235	32182791	1			AL591412	33482835	1	47729	0	0	47729
S/G/Y/R/B/O	NT_004511	AL355477	32299492	3	chr1	NT_004511	AL356055	32362679	3	0	1998	0	1998
S/G/Y/R/B/O	NT_004511	AL355477	32299492	3	chr1	NT_004511	AL606465	30913801	1	61188	0	0	61188
S/G/Y/R/B/O	NT_004511	AL355477	32299492	3			AC026936	33482835	1	29271	4567	1202	35040
S/G/Y/R/B/O	NT_004511	AL355477	32299492	3			AL139015	33482835	1	11414	0	14866	26280
S/G/Y/R/B/O	NT_004511	AL356055	32362679	3	chr1	NT_004511	AL442071	32457966	3	0	1998	0	1998
S/G/Y/R/B/O	NT_004511	AL356055	32362679	3			AC026936	30913801	1	59629	12661	10288	82578
S/G/Y/R/B/O	NT_004511	AL442071	32457966	3	chr1	NT_004511	AL137853	32577263	3	0	1997	0	1997
S/G/Y/R/B/O	NT_004511	AL442071	32457966	3			AF325330	32457966	3	11454	0	0	11454
S/G/Y/R/B/O	NT_004511	AL442071	32457966	3			AF325333	32457966	3	33471	0	0	33471
S/G/Y/R/B/O	NT_004511	AL137853	32577263	3	chr1	NT_004511	AL365277	32689116	3	0	0	0	0
S/G/Y/R/B/O	NT_004511	AL137853	32577263	3			AC024511	32362679	1	106893	0	0	106893
S/G/Y/R/B/O	NT_004511	AL137853	32577263	3			AF325334	32362679	3	17000	0	0	17000
S/G/Y/R/B/O	NT_004511	AL137853	32577263	3			AL713993	32457966	1	106225	0	0	106225
S/G/Y/R/B/O	NT_004511	AL365277	32689116	3	chr1	NT_004511	AL033526	32803083	3	0	0	0	0
S/G/Y/R/B/O	NT_004511	AL365277	32689116	3	chr1	NT_004511	AC073835	35267859	1	77762	2856	3284	83902
S/G/Y/R/B/O	NT_004511	AL365277	32689116	3			AC024511	32457966	1	67655	0	0	67655
S/G/Y/R/B/O	NT_004511	AL365277	32689116	3			AL713993	35267859	1	56226	0	0	56226
S/G/Y/R/B/O	NT_004511	AL033526	32803083	3	chr1	NT_004511	AL354919	32843852	1	0	0	0	0
S/G/Y/R/B/O	NT_004511	AL033526	32803083	3	chr1	NT_004511	AC073835	35267859	1	50528	0	25609	76137
S/G/Y/R/B/O	NT_004511	AL033526	32803083	3			AC024511	35267859	1	18730	0	0	18730
S/G/Y/R/B/O	NT_004511	AL033526	32803083	3			AC067884	35267859	1	20000	0	0	20000
S/G/Y/R/B/O	NT_004511	AL354919	32843852	1	chr1	NT_004511	AL136115	32917207	1	21301	0	0	21301
S/G/Y/R/B/O	NT_004511	AL354919	32843852	1	chr1	NT_004511	AC068629	33190880	3	72329	0	2741	75070
S/G/Y/R/B/O	NT_004511	AL354919	32843852	1	chr1	NT_004511	AC114488	33324866	1	23140	0	0	23140
S/G/Y/R/B/O	NT_004511	AL354919	32843852	1			AL139160	32917207	1	62488	10117	17699	90304
S/G/Y/R/B/O	NT_004511	AL136115	32917207	1	chr1	NT_004511	AP002344	33033114	1	47133	11043	14452	72628
S/G/Y/R/B/O	NT_004511	AL136115	32917207	1			AL139160	33033114	1	20907	4941	5663	31511
S/G/Y/R/B/O	NT_004511	AL136115	32917207	1			AP000933	32843852	1	61085	6466	13716	81267
S/G/Y/R/B/O	NT_004511	AP002344	33033114	1	chr1	NT_004511	AL663070	33035406	1	0	0	0	0
S/G/Y/R/B/O	NT_004511	AP002344	33033114	1			AP000933	32843852	1	21848	5460	10695	38003
S/G/Y/R/B/O	NT_004511	AL663070	33035406	1	chr1	NT_004511	AC068629	33190880	3	0	0	0	0
S/G/Y/R/B/O	NT_004511	AL663070	33035406	1	chr1	NT_004511	AL033527	34927368	3	41789	0	0	41789
S/G/Y/R/B/O	NT_004511	AL663070	33035406	1			AC025002	32843852	1	43091	16967	23526	83584
S/G/Y/R/B/O	NT_004511	AC068629	33190880	3	chr1	NT_004511	AC114488	33324866	1	63681	0	94083	157764
S/G/Y/R/B/O	NT_004511	AC068629	33190880	3	chr1	NT_004511	AL354919	32843852	1	72329	0	2741	75070
S/G/Y/R/B/O	NT_004511	AC068629	33190880	3			AY070269	32843852	3	10119	0	0	10119
S/G/Y/R/B/O	NT_004511	AC114488	33324866	1	chr1	NT_004511	AL356320	33482835	1	0	0	0	0
S/G/Y/R/B/O	NT_004511	AC114488	33324866	1	chr1	NT_004511	AL354919	32843852	1	23140	0	0	23140
S/G/Y/R/B/O	NT_004511	AC114488	33324866	1			AY070269	33990529	3	10119	0	0	10119
S/G/Y/R/B/O	NT_004511	AL356320	33482835	1	chr1	NT_004511	AC114495	33638027	1	55584	0	0	55584
S/G/Y/R/B/O	NT_004511	AL356320	33482835	1	chr1	NT_004511	AL445235	32182791	1	16480	2004	0	18484
S/G/Y/R/B/O	NT_004511	AL356320	33482835	1			AL365174	33638027	1	31283	2939	0	34222
S/G/Y/R/B/O	NT_004511	AC114495	33638027	1	chr1	NT_004511	AL451070	33733472	1	29376	0	0	29376
S/G/Y/R/B/O	NT_004511	AL451070	33733472	1	chr1	NT_004511	AC114494	33885315	1	5367	2752	2772	10891
S/G/Y/R/B/O	NT_004511	AC114494	33885315	1	chr1	NT_004511	AL592073	33990529	3	2000	0	0	2000
S/G/Y/R/B/O	NT_004511	AL592073	33990529	3	chr1	NT_004511	AL139249	34057064	3	0	0	0	0
S/G/Y/R/B/O	NT_004511	AL139249	34057064	3	chr1	NT_004511	AL445248	34109812	3	0	0	0	0
S/G/Y/R/B/O	NT_004511	AL139249	34057064	3			AP000933	32917207	1	28863	2434	1436	32733
S/G/Y/R/B/O	NT_004511	AL445248	34109812	3	chr1	NT_004511	AL049795	34181759	3	0	0	0	0
S/G/Y/R/B/O	NT_004511	AL445248	34109812	3			AP000933	33033114	1	25249	2360	6855	34464
S/G/Y/R/B/O	NT_004511	AL049795	34181759	3	chr1	NT_004511	AC022307	34297415	1	16854	0	0	16854
S/G/Y/R/B/O	NT_004511	AL049795	34181759	3			AL121991	34297415	1	35069	0	0	35069
S/G/Y/R/B/O	NT_004511	AL049795	34181759	3			AP000933	34297415	1	13516	0	3722	17238
S/G/Y/R/B/O	NT_004511	AC022307	34297415	1	chr1	NT_004511	AL109945	34350764	3	46822	2666	18660	68148
S/G/Y/R/B/O	NT_004511	AC022307	34297415	1	chr1	NT_004511	AC025388	34432578	1	16455	2718	0	19173
S/G/Y/R/B/O	NT_004511	AC022307	34297415	1			AL121991	34350764	1	30773	0	45519	76292
S/G/Y/R/B/O	NT_004511	AL109945	34350764	3	chr1	NT_004511	AC025388	34432578	1	0	0	0	0
S/G/Y/R/B/O	NT_004511	AL109945	34350764	3			AL121991	136317893	1	23082	0	0	23082
S/G/Y/R/B/O	NT_004511	AC025388	34432578	1	chr1	NT_004511	AL356986	34457930	2	89105	26117	21713	136935
S/G/Y/R/B/O	NT_004511	AC025388	34432578	1	chr1	NT_004511	AC022307	34297415	1	16455	2718	0	19173
S/G/Y/R/B/O	NT_004511	AC025388	34432578	1	chr1	NT_004511	AL033529	34554091	3	25411	8719	11447	45577
S/G/Y/R/B/O	NT_004511	AC025388	34432578	1			AL591072	34457930	1	20614	9075	4566	34255
S/G/Y/R/B/O	NT_004511	AL356986	34457930	2	chr1	NT_004511	AL033529	34554091	3	106044	0	0	106044
S/G/Y/R/B/O	NT_004511	AL356986	34457930	2			AL591072	34554091	1	68585	12311	4432	85328
S/G/Y/R/B/O	NT_004511	AL033529	34554091	3	chr1	NT_004511	AL138800	34701258	3	0	0	0	0
S/G/Y/R/B/O	NT_004511	AL033529	34554091	3	chr1	NT_004511	AC025388	34432578	1	25411	8719	11447	45577
S/G/Y/R/B/O	NT_004511	AL033529	34554091	3			AL591072	34457930	1	53474	10220	0	63694
S/G/Y/R/B/O	NT_004511	AL138800	34701258	3	chr1	NT_004511	AC025422	34703135	1	3771	0	0	3771
S/G/Y/R/B/O	NT_004511	AC025422	34703135	1	chr1	NT_004511	AC114489	34703523	1	40711	2844	41903	85458
S/G/Y/R/B/O	NT_004511	AC025422	34703135	1	chr1	NT_004511	AC023038	34845650	1	32633	2810	5996	41439
S/G/Y/R/B/O	NT_004511	AC025422	34703135	1			AL356478	34701258	1	27875	1967	0	29842
S/G/Y/R/B/O	NT_004511	AC114489	34703523	1	chr1	NT_004511	AC114493	34825069	1	24973	0	14595	39568
S/G/Y/R/B/O	NT_004511	AC114489	34703523	1	chr1	NT_004511	AC023038	34845650	1	78709	8674	3235	90618
S/G/Y/R/B/O	NT_004511	AC114489	34703523	1			AL356478	34825069	1	38104	4601	7562	50267
S/G/Y/R/B/O	NT_004511	AC114493	34825069	1	chr1	NT_004511	AC023038	34845650	1	36503	1734	1453	39690
S/G/Y/R/B/O	NT_004511	AC114493	34825069	1	chr1	NT_004511	AL031602	35354622	3	38113	0	0	38113
S/G/Y/R/B/O	NT_004511	AC114493	34825069	1	chr1	NT_004511	AL137791	35288368	3	65896	0	0	65896
S/G/Y/R/B/O	NT_004511	AC114493	34825069	1			AL356478	35288368	1	13062	2567	0	15629
S/G/Y/R/B/O	NT_004511	AC114493	34825069	1			AL356780	35288368	1	40470	21327	12465	74262
S/G/Y/R/B/O	NT_004511	AC023038	34845650	1	chr1	NT_004511	AL033527	34927368	3	0	0	0	0
S/G/Y/R/B/O	NT_004511	AC023038	34845650	1	chr1	NT_004511	AC025422	34703135	1	32633	2810	5996	41439
S/G/Y/R/B/O	NT_004511	AC023038	34845650	1	chr1	NT_004511	AC114489	34703523	1	78709	8674	3235	90618
S/G/Y/R/B/O	NT_004511	AC023038	34845650	1	chr1	NT_004511	AL137791	35288368	3	13304	0	0	13304
S/G/Y/R/B/O	NT_004511	AC023038	34845650	1			AL356478	35288368	1	36995	0	0	36995
S/G/Y/R/B/O	NT_004511	AC023038	34845650	1			AL356780	35288368	1	22387	5761	11305	39453
S/G/Y/R/B/O	NT_004511	AL033527	34927368	3	chr1	NT_004511	AL049824	35093764	3	0	0	0	0
S/G/Y/R/B/O	NT_004511	AL033527	34927368	3	chr1	NT_004511	AL663070	33035406	1	41789	0	0	41789
S/G/Y/R/B/O	NT_004511	AL033527	34927368	3			AC025002	35288368	1	22597	20827	7474	50898
S/G/Y/R/B/O	NT_004511	AL033527	34927368	3			AC067884	35288368	1	35745	2449	0	38194
S/G/Y/R/B/O	NT_004511	AL033527	34927368	3			AL354888	35267859	1	95813	0	21619	117432
S/G/Y/R/B/O	NT_004511	AL049824	35093764	3	chr1	NT_004511	AL035404	35113447	3	0	0	0	0
S/G/Y/R/B/O	NT_004511	AL049824	35093764	3			AC067884	33035406	1	13074	0	0	13074
S/G/Y/R/B/O	NT_004511	AL049824	35093764	3			AL354888	33035406	1	19776	0	0	19776
S/G/Y/R/B/O	NT_004511	AL035404	35113447	3	chr1	NT_004511	AC073835	35267859	1	24853	3496	22784	51133
S/G/Y/R/B/O	NT_004511	AL035404	35113447	3			AC067884	33035406	1	96264	6579	1179	104022
S/G/Y/R/B/O	NT_004511	AL035404	35113447	3			AL354888	35267859	1	39398	0	0	39398
S/G/Y/R/B/O	NT_004511	AC073835	35267859	1	chr1	NT_004511	AL137791	35288368	3	0	0	0	0
S/G/Y/R/B/O	NT_004511	AC073835	35267859	1	chr1	NT_004511	AL033526	32803083	3	50528	0	25609	76137
S/G/Y/R/B/O	NT_004511	AC073835	35267859	1	chr1	NT_004511	AL365277	32689116	3	77762	2856	3284	83902
S/G/Y/R/B/O	NT_004511	AC073835	35267859	1			AC024511	35267859	1	29489	0	6109	35598
S/G/Y/R/B/O	NT_004511	AC073835	35267859	1			AL713993	32689116	1	18025	0	6109	24134
S/G/Y/R/B/O	NT_004511	AL137791	35288368	3	chr1	NT_004511	AL031602	35354622	3	0	0	0	0
S/G/Y/R/B/O	NT_004511	AL137791	35288368	3	chr1	NT_004511	AC023038	34845650	1	13304	0	0	13304
S/G/Y/R/B/O	NT_004511	AL137791	35288368	3	chr1	NT_004511	AC114493	34825069	1	65896	0	0	65896
S/G/Y/R/B/O	NT_004511	AL137791	35288368	3			AL356780	34825069	1	12322	14828	3803	30953
S/G/Y/R/B/O	NT_004511	AL031602	35354622	3	chr1	NT_004511	AL355864	35427452	3	0	0	0	0
S/G/Y/R/B/O	NT_004511	AL031602	35354622	3	chr1	NT_004511	AC114493	34825069	1	38113	0	0	38113
S/G/Y/R/B/O	NT_004511	AL355864	35427452	3	chr1	NT_004511	AL020995	35439042	3	0	0	0	0
S/G/Y/R/B/O	NT_004511	AL020995	35439042	3	chr1	NT_004511	AC022262	35589939	1	8661	0	86043	94704
S/G/Y/R/B/O	NT_004511	AL020995	35439042	3	chr1	NT_004511	AF161326	35704693	1	47787	0	4733	52520
S/G/Y/R/B/O	NT_004511	AL020995	35439042	3	chr1	NT_004511	AL662907	35603540	2	39453	0	0	39453
S/G/Y/R/B/O	NT_004511	AC022262	35589939	1	chr1	NT_004511	AL662907	35603540	2	67347	0	34444	101791
S/G/Y/R/B/O	NT_004511	AC022262	35589939	1	chr1	NT_004511	AF161326	35704693	1	100483	1629	4733	106845
S/G/Y/R/B/O	NT_004511	AL662907	35603540	2	chr1	NT_004511	AL513327	35703293	1	52670	0	0	52670
S/G/Y/R/B/O	NT_004511	AL662907	35603540	2	chr1	NT_004511	AF161326	35704693	1	44571	0	0	44571
S/G/Y/R/B/O	NT_004511	AL662907	35603540	2	chr1	NT_004511	AL020995	35439042	3	39453	0	0	39453
S/G/Y/R/B/O	NT_004511	AL513327	35703293	1	chr1	NT_004511	AF161326	35704693	1	0	0	0	0
S/G/Y/R/B/O	NT_004511	AL513327	35703293	1	chr1	NT_004511	AL138837	35855124	1	16567	0	0	16567
S/G/Y/R/B/O	NT_004511	AF161326	35704693	1	chr1	NT_004511	AL138837	35855124	1	0	0	0	0
S/G/Y/R/B/O	NT_004511	AF161326	35704693	1	chr1	NT_004511	AC022262	35589939	1	100483	1629	4733	106845
S/G/Y/R/B/O	NT_004511	AF161326	35704693	1	chr1	NT_004511	AL020995	35439042	3	47787	0	4733	52520
S/G/Y/R/B/O	NT_004511	AF161326	35704693	1	chr1	NT_004511	AL662907	35603540	2	44571	0	0	44571
S/G/Y/R/B/O	NT_004511	AL138837	35855124	1	chr1	NT_004511	AC115285	35920054	1	17362	0	0	17362
S/G/Y/R/B/O	NT_004511	AL138837	35855124	1	chr1	NT_004511	AL513327	35703293	1	16567	0	0	16567
S/G/Y/R/B/O	NT_004511	AC115285	35920054	1	chr1	NT_004511	AC025303	35960552	1	50597	4694	19927	75218
S/G/Y/R/B/O	NT_004511	AC115285	35920054	1	chr1	NT_004511	AL355178	35998190	3	44962	0	1295	46257
S/G/Y/R/B/O	NT_004511	AC025303	35960552	1	chr1	NT_004511	AL355178	35998190	3	71315	4934	16533	92782
S/G/Y/R/B/O	NT_004511	AC025303	35960552	1	chr1	NT_004511	AL161643	36103024	3	20447	0	1249	21696
S/G/Y/R/B/O	NT_004511	AC025303	35960552	1			AC013800	35998190	1	40103	0	2803	42906
S/G/Y/R/B/O	NT_004511	AL355178	35998190	3	chr1	NT_004511	AL161643	36103024	3	0	0	0	0
S/G/Y/R/B/O	NT_004511	AL355178	35998190	3	chr1	NT_004511	AC115285	35920054	1	44962	0	1295	46257
S/G/Y/R/B/O	NT_004511	AL355178	35998190	3			AC013800	35998190	1	11426	0	0	11426
S/G/Y/R/B/O	NT_004511	AL161643	36103024	3	chr1	NT_004511	AL139140	36189783	3	0	0	0	0
S/G/Y/R/B/O	NT_004511	AL161643	36103024	3	chr1	NT_004511	AC025303	35960552	1	20447	0	1249	21696
S/G/Y/R/B/O	NT_004511	AL161643	36103024	3			AC013800	35920054	1	88615	0	0	88615
S/G/Y/R/B/O	NT_004511	AL139140	36189783	3	chr1	NT_004511	AL121980	36266012	3	2000	0	0	2000
S/G/Y/R/B/O	NT_004511	AL139140	36189783	3			AC013800	35960552	1	53711	0	0	53711
S/G/Y/R/B/O	NT_004511	AL121980	36266012	3	chr1	NT_004511	AL662927	36394616	1	25397	0	0	25397
S/G/Y/R/B/O	NT_004511	AL121980	36266012	3	chr1	NT_004511	AC012250	36625244	1	25347	0	0	25347
S/G/Y/R/B/O	NT_004511	AL662927	36394616	1	chr1	NT_004511	AL607106	36463629	3	36737	0	0	36737
S/G/Y/R/B/O	NT_004511	AL662927	36394616	1	chr1	NT_004511	AC012250	36625244	1	197880	0	2334	200214
S/G/Y/R/B/O	NT_004511	AL662927	36394616	1	chr1	NT_004511	AC022251	36613190	1	60351	1553	0	61904
S/G/Y/R/B/O	NT_004511	AL662927	36394616	1	chr1	NT_004511	AL596224	36500406	3	80380	0	0	80380
S/G/Y/R/B/O	NT_004511	AL662927	36394616	1			AL139144	36266012	1	43606	2855	26005	72466
S/G/Y/R/B/O	NT_004511	AL662927	36394616	1			AL359498	36266012	1	12902	2323	0	15225
S/G/Y/R/B/O	NT_004511	AL607106	36463629	3	chr1	NT_004511	AL596224	36500406	3	0	0	0	0
S/G/Y/R/B/O	NT_004511	AL596224	36500406	3	chr1	NT_004511	AC022251	36613190	1	110094	3089	0	113183
S/G/Y/R/B/O	NT_004511	AL596224	36500406	3	chr1	NT_004511	AC012250	36625244	1	32114	0	0	32114
S/G/Y/R/B/O	NT_004511	AL596224	36500406	3	chr1	NT_004511	AL662927	36394616	1	80380	0	0	80380
S/G/Y/R/B/O	NT_004511	AL596224	36500406	3			AL359498	36618585	1	35350	2323	0	37673
S/G/Y/R/B/O	NT_004511	AC022251	36613190	1	chr1	NT_004511	AC115286	36618585	1	56676	0	3451	60127
S/G/Y/R/B/O	NT_004511	AC022251	36613190	1	chr1	NT_004511	AC012250	36625244	1	40532	1583	0	42115
S/G/Y/R/B/O	NT_004511	AC022251	36613190	1	chr1	NT_004511	AL662927	36394616	1	60351	1553	0	61904
S/G/Y/R/B/O	NT_004511	AC022251	36613190	1			AL359498	36618585	1	32566	5510	0	38076
S/G/Y/R/B/O	NT_004511	AC115286	36618585	1	chr1	NT_004511	AC012250	36625244	1	0	0	0	0
S/G/Y/R/B/O	NT_004511	AC115286	36618585	1			AL359498	36613190	1	18179	2165	17544	37888
S/G/Y/R/B/O	NT_004511	AC012250	36625244	1	chr1	NT_004511	AL360092	36735892	3	0	0	0	0
S/G/Y/R/B/O	NT_004511	AC012250	36625244	1	chr1	NT_004511	AC022251	36613190	1	40532	1583	0	42115
S/G/Y/R/B/O	NT_004511	AC012250	36625244	1	chr1	NT_004511	AL121980	36266012	3	25347	0	0	25347
S/G/Y/R/B/O	NT_004511	AC012250	36625244	1	chr1	NT_004511	AL596224	36500406	3	32114	0	0	32114
S/G/Y/R/B/O	NT_004511	AC012250	36625244	1	chr1	NT_004511	AL662927	36394616	1	197880	0	2334	200214
S/G/Y/R/B/O	NT_004511	AC012250	36625244	1			AL139144	36266012	1	43527	0	0	43527
S/G/Y/R/B/O	NT_004511	AL360092	36735892	3	chr1	NT_004511	AL008634	36821581	3	0	1997	0	1997
S/G/Y/R/B/O	NT_004511	AL008634	36821581	3	chr1	NT_004511	AL365188	36972173	1	51572	0	0	51572
S/G/Y/R/B/O	NT_004511	AL365188	36972173	1	chr1	NT_004511	AC099565	37075683	1	42961	0	0	42961
S/G/Y/R/B/O	NT_004511	AC099565	37075683	1	chr1	NT_004511	AL356256	37119647	2	50238	0	0	50238
S/G/Y/R/B/O	NT_004511	AL356256	37119647	2	chr1	NT_004511	AL121988	37157416	3	124619	0	0	124619
S/G/Y/R/B/O	NT_004511	AL121988	37157416	3	chr1	NT_004511	AL122010	37284292	3	0	0	0	0
S/G/Y/R/B/O	NT_004511	AL122010	37284292	3	chr1	NT_004511	AC114490	37329798	1	8046	0	0	8046
S/G/Y/R/B/O	NT_004511	AC114490	37329798	1	chr1	NT_004511	AL607089	37475021	3	3811	0	0	3811
S/G/Y/R/B/O	NT_004511	AL607089	37475021	3	chr1	NT_004511	AL590434	37568831	2	0	1996	0	1996
S/G/Y/R/B/O	NT_004511	AL607089	37475021	3	chr1	NT_004511	AC026026	37796328	1	19029	2517	5397	26943
S/G/Y/R/B/O	NT_004511	AL607089	37475021	3			AC092931	37796328	1	15140	0	2127	17267
S/G/Y/R/B/O	NT_004511	AL590434	37568831	2	chr1	NT_004511	AC061970	37752745	1	72034	9507	11722	93263
S/G/Y/R/B/O	NT_004511	AL590434	37568831	2	chr1	NT_004511	AC026026	37796328	1	46373	10828	24806	82007
S/G/Y/R/B/O	NT_004511	AL590434	37568831	2			AC092931	37752745	1	35617	0	3659	39276
S/G/Y/R/B/O	NT_004511	AC061970	37752745	1	chr1	NT_004511	AL160000	37755055	3	23299	6211	2693	32203
S/G/Y/R/B/O	NT_004511	AC061970	37752745	1	chr1	NT_004511	AC026026	37796328	1	11399	6407	14322	32128
S/G/Y/R/B/O	NT_004511	AL160000	37755055	3	chr1	NT_004511	AL356362	37795787	1	0	1996	0	1996
S/G/Y/R/B/O	NT_004511	AL356362	37795787	1	chr1	NT_004511	AC026026	37796328	1	0	0	0	0
S/G/Y/R/B/O	NT_004511	AL356362	37795787	1			AL357733	37755055	1	58190	0	12067	70257
S/G/Y/R/B/O	NT_004511	AC026026	37796328	1	chr1	NT_004511	AL445211	37919928	3	0	0	0	0
S/G/Y/R/B/O	NT_004511	AC026026	37796328	1	chr1	NT_004511	AC061970	37752745	1	11399	6407	14322	32128
S/G/Y/R/B/O	NT_004511	AC026026	37796328	1	chr1	NT_004511	AL590434	37568831	2	46373	10828	24806	82007
S/G/Y/R/B/O	NT_004511	AC026026	37796328	1	chr1	NT_004511	AL607089	37475021	3	19029	2517	5397	26943
S/G/Y/R/B/O	NT_004511	AC026026	37796328	1			AC092931	37752745	1	11005	4050	18557	33612
S/G/Y/R/B/O	NT_004511	AL445211	37919928	3	chr1	NT_004511	AC004865	37924824	3	0	1999	0	1999
S/G/Y/R/B/O	NT_004511	AC004865	37924824	3	chr1	NT_004511	AL157951	38042912	3	0	0	0	0
S/G/Y/R/B/O	NT_004511	AC004865	37924824	3			AL357733	37795787	1	21369	4877	5081	31327
S/G/Y/R/B/O	NT_004511	AC004865	37924824	3			AL445260	37919928	1	109835	2441	0	112276
S/G/Y/R/B/O	NT_004511	AL157951	38042912	3	chr1	NT_004511	AL357035	38072701	2	11161	0	0	11161
S/G/Y/R/B/O	NT_004511	AL357035	38072701	2	chr1	NT_004511	AL354864	38083515	3	70279	0	0	70279
S/G/Y/R/B/O	NT_004511	AL354864	38083515	3	chr1	NT_004511	AL359186	38277811	1	33128	1136	8056	42320
S/G/Y/R/B/O	NT_004511	AL354864	38083515	3			AL139143	38083515	1	59942	5232	6076	71250
S/G/Y/R/B/O	NT_004511	AL359186	38277811	1	chr1	NT_004511	AL139286	38323906	3	72276	0	0	72276
S/G/Y/R/B/O	NT_004511	AL359186	38277811	1			AL139143	38277811	1	50420	10583	2800	63803
S/G/Y/R/B/O	NT_004511	AL139286	38323906	3	chr1	NT_004511	AL138787	38462083	3	0	0	0	0
S/G/Y/R/B/O	NT_004511	AL139286	38323906	3	chr1	NT_004511	AC012141	38590111	1	33295	1606	2180	37081
S/G/Y/R/B/O	NT_004511	AL139286	38323906	3			AL138843	38590111	1	57275	0	0	57275
S/G/Y/R/B/O	NT_004511	AL138787	38462083	3	chr1	NT_004511	AC012141	38590111	1	97979	4582	4133	106694
S/G/Y/R/B/O	NT_004511	AL138787	38462083	3			AL138843	38590111	1	69438	2552	3446	75436
S/G/Y/R/B/O	NT_004511	AC012141	38590111	1	chr1	NT_004511	AC114484	38594888	1	22303	0	0	22303
S/G/Y/R/B/O	NT_004511	AC012141	38590111	1	chr1	NT_004511	AL139286	38323906	3	33295	1606	2180	37081
S/G/Y/R/B/O	NT_004511	AC012141	38590111	1			AL138843	38462083	1	50360	3803	6332	60495
S/G/Y/R/B/O	NT_004511	AC114484	38594888	1	chr1	NT_004511	AL360074	38666377	1	64871	4857	0	69728
S/G/Y/R/B/O	NT_004511	AL360074	38666377	1	chr1	NT_004511	AL591845	38763874	1	61174	2129	6130	69433
S/G/Y/R/B/O	NT_004511	AL591845	38763874	1	chr1	NT_004511	AL358433	38886453	1	52356	0	0	52356
S/G/Y/R/B/O	NT_004511	AL358433	38886453	1	chr1	NT_004511	AL445245	38925233	1	42637	0	0	42637
S/G/Y/R/B/O	NT_004511	AL445245	38925233	1	chr1	NT_004511	AL080286	39014973	3	56442	0	0	56442
S/G/Y/R/B/O	NT_004511	AL080286	39014973	3	chr1	NT_004511	AL596257	39170251	3	0	1995	0	1995
S/G/Y/R/B/O	NT_004511	AL596257	39170251	3
S/G/Y/R/B/O	NT_004511	AL596257	39170251	3			AL356412	39014973	1	20784	0	0	20784