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  Chromosome 1 - Clone Overlaps - Single Contig
 
Description of this page Main Reports Page Main Assembly Page Main Overlap Page Whole Chromosome Single Contigs

Line color code:

  • White: overlap with immediately succeeding clone
  • Green: overlap with clone in same contig
  • Pink: overlap with clone in same chromosome, different contig
  • Red: overlap with clone on different chromosome
  • Yellow: overlap with clone not used in assembly
NT_032954 NT_004350 NT_022058 NT_004321 NT_004547 NT_021917 NT_028054 NT_032970
NT_032967 NT_021937 NT_004488 NT_022041 NT_004873 NT_030584 NT_004572 NT_029218
NT_004610 NT_032979 NT_004391 NT_030571 NT_004782 NT_028053 NT_004538 NT_004511
NT_004852 NT_032963 NT_032971 NT_032972 NT_031724 NT_004386 NT_032978 NT_032977
NT_004424 NT_032976 NT_032965 NT_032973 NT_031689 NT_029223 NT_004641 NT_029865
NT_031737 NT_004636 NT_032948 NT_004464 NT_032953 NT_004483 NT_004302 NT_032960
NT_032956 NT_032974 NT_004902 NT_026943 NT_029231 NT_004658 NT_004686 NT_021979
NT_030565 NT_028050 NT_004308 NT_004623 NT_030567 NT_032957 NT_021977 NT_029860
NT_019273 NT_031697 NT_004754 NT_032961 NT_032975 NT_022052 NT_022071 NT_004434
NT_032962 NT_021907 NT_004441 NT_030577 NT_004858 NT_019291 NT_031708 NT_029226
NT_026945 NT_004982 NT_032952 NT_004668 NT_029874 NT_004487 NT_032958 NT_004599
NT_031716 NT_004671 NT_021909 NT_004416 NT_029862 NT_021905 NT_032947 NT_021877
NT_004612 NT_031718 NT_032950 NT_004525 NT_032955 NT_029863 NT_032951 NT_021953
NT_004861 NT_031696 NT_004908 NT_004559 NT_031728 NT_021973 NT_004753 NT_004433
NT_030561 NT_004836 NT_031685 NT_004771 NT_004734 NT_031700 NT_031719 NT_004536
NT_032964 NT_031732 NT_032966 NT_031730 NT_029870 NT_032969 NT_032968


  NT_004464
 
LinksContig1Acc1Start1PhsChr2Contig2Acc2Start2PhsStrong OverlapMedium OverlapWeak OverlapTotal Overlap
S/G/Y/R/B/O NT_004464AL691520690577351chr1NT_004464AC0319976922571618488612367231899571
S/G/Y/R/B/O NT_004464AL691520690577351  AL583851692257161833720369087062
S/G/Y/R/B/O NT_004464AL691520690577351  AL64547569225716185034323661527149797
S/G/Y/R/B/O NT_004464AC031997692257161chr1NT_004464AL356106692853503377908666137147827
S/G/Y/R/B/O NT_004464AC031997692257161  AL5838516928535017467418000488197555
S/G/Y/R/B/O NT_004464AC031997692257161  AL645475692853501449046707101852629
S/G/Y/R/B/O NT_004464AL356106692853503chr1NT_004464AL3588546933782930199901999
S/G/Y/R/B/O NT_004464AL356106692853503  AL583851693378291371220037122
S/G/Y/R/B/O NT_004464AL358854693378293chr1NT_004464AL5122716942093730199601996
S/G/Y/R/B/O NT_004464AL512271694209373chr1NT_004464AL1574066955185730199801998
S/G/Y/R/B/O NT_004464AL512271694209373  AC021495694209371956230095623
S/G/Y/R/B/O NT_004464AL157406695518573chr1NT_004464AL35989469672930300100100
S/G/Y/R/B/O NT_004464AL157406695518573  AC021495693378291371063894041000
S/G/Y/R/B/O NT_004464AL359894696729303chr1NT_004464AL11735369833870300100100
S/G/Y/R/B/O NT_004464AL359894696729303  AL139153698338701674342529069963
S/G/Y/R/B/O NT_004464AL117353698338703chr1NT_004464AL3594126994728530000
S/G/Y/R/B/O NT_004464AL117353698338703  AC055743695518571152620015262
S/G/Y/R/B/O NT_004464AL117353698338703  AL1391536955185711516202970644868
S/G/Y/R/B/O NT_004464AL359412699472853chr1NT_004464AL391728700096702121140012114
S/G/Y/R/B/O NT_004464AL359412699472853  AC055743696729301593831180060563
S/G/Y/R/B/O NT_004464AL391728700096702chr1NT_004464AL1588407015946530000
S/G/Y/R/B/O NT_004464AL391728700096702  AC05574370009670111535700115357
S/G/Y/R/B/O NT_004464AL158840701594653chr1NT_004464AL1579487024713030199901999
S/G/Y/R/B/O NT_004464AL158840701594653  AC025738699472851876490087649
S/G/Y/R/B/O NT_004464AL157948702471303chr1NT_004464AL3537717034000030000
S/G/Y/R/B/O NT_004464AL157948702471303  AC019213702471301114640011464
S/G/Y/R/B/O NT_004464AL157948702471303  AC025738702471301785170078517
S/G/Y/R/B/O NT_004464AL353771703400003chr1NT_004464AL3547217046961232000002000
S/G/Y/R/B/O NT_004464AL353771703400003  AC01921370159465111886655094064128439
S/G/Y/R/B/O NT_004464AL354721704696123chr1NT_004464AL1588397052468232000002000
S/G/Y/R/B/O NT_004464AL354721704696123  AC019213704696121120241885989323802
S/G/Y/R/B/O NT_004464AL158839705246823chr1NT_004464AL3548727059279230199201992
S/G/Y/R/B/O NT_004464AL354872705927923chr1NT_004464AL5921047074057030000
S/G/Y/R/B/O NT_004464AL354872705927923  AC02654570592792113366102705136366
S/G/Y/R/B/O NT_004464AL354872705927923  AL445425705246822665750066575
S/G/Y/R/B/O NT_004464AL592104707405703chr1NT_004464AL5132857087205930000
S/G/Y/R/B/O NT_004464AL592104707405703  AL355524705246821948340094834
S/G/Y/R/B/O NT_004464AL592104707405703  AL445425705246822322500032250
S/G/Y/R/B/O NT_004464AL513285708720593chr1NT_004464AL6628987096803732000002000
S/G/Y/R/B/O NT_004464AL513285708720593  AL3555247052468216258703502097607
S/G/Y/R/B/O NT_004464AL662898709680373chr1NT_004464AL1580877097133032000002000
S/G/Y/R/B/O NT_004464AL158087709713303chr1NT_004464AL0314297112201930200002000
S/G/Y/R/B/O NT_004464AL158087709713303  AL1394227112201914261821422994774707
S/G/Y/R/B/O NT_004464AL031429711220193chr1NT_004464AL5124437125324030199601996
S/G/Y/R/B/O NT_004464AL031429711220193  AL139422709680371306482900931042858
S/G/Y/R/B/O NT_004464AL512443712532403chr1NT_004464AL3602977130685330199701997
S/G/Y/R/B/O NT_004464AL360297713068533chr1NT_004464AL3584537147473430000
S/G/Y/R/B/O NT_004464AL360297713068533  AC011108713068531425310289345424
S/G/Y/R/B/O NT_004464AL360297713068533  AC0249817130685316356110541074102
S/G/Y/R/B/O NT_004464AL360297713068533  AC073627713068531446600044660
S/G/Y/R/B/O NT_004464AL358453714747343chr1NT_004464AL6273177158166930000
S/G/Y/R/B/O NT_004464AL358453714747343  AC01110871253240110891100108911
S/G/Y/R/B/O NT_004464AL358453714747343  AC024981712532401854936246091739
S/G/Y/R/B/O NT_004464AL358453714747343  AC027532712532401652537282277875313
S/G/Y/R/B/O NT_004464AL358453714747343  AC0736277125324019562323524433102408
S/G/Y/R/B/O NT_004464AL358453714747343  AC1134117125324013053505826088795
S/G/Y/R/B/O NT_004464AL627317715816693chr1NT_004464AL3549497167330230199901999
S/G/Y/R/B/O NT_004464AL627317715816693  AC02753271253240147272163650149409
S/G/Y/R/B/O NT_004464AL627317715816693  AC113411712532401894510089451
S/G/Y/R/B/O NT_004464AL354949716733023chr1NT_004464AL35559071851871110002200100022
S/G/Y/R/B/O NT_004464AL355590718518711chr1NT_004464AL359821718856453426780042678
S/G/Y/R/B/O NT_004464AL355590718518711  AC021416715816691210337272028305
S/G/Y/R/B/O NT_004464AL359821718856453chr1NT_004464AL3566007200359630199701997
S/G/Y/R/B/O NT_004464AL359821718856453  AC0214167188564519635949190101278
S/G/Y/R/B/O NT_004464AL356600720035963chr1NT_004464AL3912397213305330000
S/G/Y/R/B/O NT_004464AL356600720035963  AC00969494427013196453010938107391
S/G/Y/R/B/O NT_004464AL356600720035963  AC021416944270131257120025712
S/G/Y/R/B/O NT_004464AL356600720035963  AL158079944270131278284018207833924
S/G/Y/R/B/O NT_004464AL391239721330533chr1NT_004464AL6457677220542130000
S/G/Y/R/B/O NT_004464AL391239721330533  AC0096949442701312087202095941831
S/G/Y/R/B/O NT_004464AL391239721330533  AC023656944270131170730213719210
S/G/Y/R/B/O NT_004464AL391239721330533  AL158079944270131116932278423418205
S/G/Y/R/B/O NT_004464AL645767722054213chr1NT_004464AL5133497223713930000
S/G/Y/R/B/O NT_004464AL645767722054213  AC023656944270131316570296634623
S/G/Y/R/B/O NT_004464AL513349722371393chr1NT_004464AL3653627238472730199801998
S/G/Y/R/B/O NT_004464AL513349722371393  AC02365694427013113087307962138835
S/G/Y/R/B/O NT_004464AL365362723847273chr1NT_004464AL6457247247506730000
S/G/Y/R/B/O NT_004464AL365362723847273  AC021592723847271629586519130570782
S/G/Y/R/B/O NT_004464AL645724724750673chr1NT_004464AL5122927248408830199001990
S/G/Y/R/B/O NT_004464AL512292724840883chr1NT_004464AL3652547261748530199501995
S/G/Y/R/B/O NT_004464AL512292724840883  AC016509724840881178080017808
S/G/Y/R/B/O NT_004464AL512292724840883  AC021592724840881698072455638978651
S/G/Y/R/B/O NT_004464AL365254726174853chr1NT_004464AL5131667277319430199301993
S/G/Y/R/B/O NT_004464AL365254726174853  AC01650972475067114236222250144587
S/G/Y/R/B/O NT_004464AL513166727731943chr1NT_004464AL1391497294201132000002000
S/G/Y/R/B/O NT_004464AL139149729420113chr1NT_004464AL5838087296196930000
S/G/Y/R/B/O NT_004464AL139149729420113  AC073380726174851190930019093
S/G/Y/R/B/O NT_004464AL583808729619693         
S/G/Y/R/B/O NT_004464AL583808729619693  AC073380727731941131289141320145421