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  Chromosome 1 - Clone Overlaps - Single Contig
 
Description of this page Main Reports Page Main Assembly Page Main Overlap Page Whole Chromosome Single Contigs

Line color code:

  • White: overlap with immediately succeeding clone
  • Green: overlap with clone in same contig
  • Pink: overlap with clone in same chromosome, different contig
  • Red: overlap with clone on different chromosome
  • Yellow: overlap with clone not used in assembly
NT_032954 NT_004350 NT_022058 NT_004321 NT_004547 NT_021917 NT_028054 NT_032970
NT_032967 NT_021937 NT_004488 NT_022041 NT_004873 NT_030584 NT_004572 NT_029218
NT_004610 NT_032979 NT_004391 NT_030571 NT_004782 NT_028053 NT_004538 NT_004511
NT_004852 NT_032963 NT_032971 NT_032972 NT_031724 NT_004386 NT_032978 NT_032977
NT_004424 NT_032976 NT_032965 NT_032973 NT_031689 NT_029223 NT_004641 NT_029865
NT_031737 NT_004636 NT_032948 NT_004464 NT_032953 NT_004483 NT_004302 NT_032960
NT_032956 NT_032974 NT_004902 NT_026943 NT_029231 NT_004658 NT_004686 NT_021979
NT_030565 NT_028050 NT_004308 NT_004623 NT_030567 NT_032957 NT_021977 NT_029860
NT_019273 NT_031697 NT_004754 NT_032961 NT_032975 NT_022052 NT_022071 NT_004434
NT_032962 NT_021907 NT_004441 NT_030577 NT_004858 NT_019291 NT_031708 NT_029226
NT_026945 NT_004982 NT_032952 NT_004668 NT_029874 NT_004487 NT_032958 NT_004599
NT_031716 NT_004671 NT_021909 NT_004416 NT_029862 NT_021905 NT_032947 NT_021877
NT_004612 NT_031718 NT_032950 NT_004525 NT_032955 NT_029863 NT_032951 NT_021953
NT_004861 NT_031696 NT_004908 NT_004559 NT_031728 NT_021973 NT_004753 NT_004433
NT_030561 NT_004836 NT_031685 NT_004771 NT_004734 NT_031700 NT_031719 NT_004536
NT_032964 NT_031732 NT_032966 NT_031730 NT_029870 NT_032969 NT_032968


  NT_004350
 
LinksContig1Acc1Start1PhsChr2Contig2Acc2Start2PhsStrong OverlapMedium OverlapWeak OverlapTotal Overlap
S/G/Y/R/B/O NT_004350AL1627416711101chr1NT_004350AL1392877451071367840036784
S/G/Y/R/B/O NT_004350AL1627416711101chr1NT_032954AL390719719911312610031261
S/G/Y/R/B/O NT_004350AL1627416711101  AL0968051882053340390034039
S/G/Y/R/B/O NT_004350AL1392877451071chr1NT_004350AC0262838351761339840543439418
S/G/Y/R/B/O NT_004350AL1392877451071  AL0968058351763337150033715
S/G/Y/R/B/O NT_004350AC0262838351761chr1NT_004350AL39124488231634662901854565174
S/G/Y/R/B/O NT_004350AC0262838351761chr4NT_022740AC0797481638958103143350014335
S/G/Y/R/B/O NT_004350AC0262838351761chr1NT_004350AL1579459502393393210039321
S/G/Y/R/B/O NT_004350AL3912448823163chr1NT_004350AL15794595023930000
S/G/Y/R/B/O NT_004350AL3912448823163  AC09361583517611883001845637286
S/G/Y/R/B/O NT_004350AL1579459502393chr1NT_004350AL64572898923314348004348
S/G/Y/R/B/O NT_004350AL1579459502393chr1NT_004350AC0262838351761393210039321
S/G/Y/R/B/O NT_004350AL1579459502393  AC0936158351761372280037228
S/G/Y/R/B/O NT_004350AL6457289892331chr1NT_004350AL691432102709515010005010
S/G/Y/R/B/O NT_004350AL6457289892331chr1NT_004350AL713970107495812335522323720562792
S/G/Y/R/B/O NT_004350AL6457289892331  AC09361583517611808437781143233294
S/G/Y/R/B/O NT_004350AL69143210270951chr1NT_004350AL71397010749581142220998324205
S/G/Y/R/B/O NT_004350AL69143210270951chr1NT_004350AL031282110458932715222881248441924
S/G/Y/R/B/O NT_004350AL71397010749581chr1NT_004350AL031282110458930000
S/G/Y/R/B/O NT_004350AL71397010749581chr1NT_004350AL64572898923312335522323720562792
S/G/Y/R/B/O NT_004350AL71397010749581  AC0936154901143711642744441455435425
S/G/Y/R/B/O NT_004350AL03128211045893chr1NT_004350AL10991712107741375940037594
S/G/Y/R/B/O NT_004350AL03128211045893chr1NT_004350AL691432102709512715222881248441924
S/G/Y/R/B/O NT_004350AL03128211045893  AL35567512107741387119860048571
S/G/Y/R/B/O NT_004350AL10991712107741chr1NT_004350AL39184513735011569610056961
S/G/Y/R/B/O NT_004350AL10991712107741  AL35567511045891676257616306078301
S/G/Y/R/B/O NT_004350AL39184513735011chr1NT_004350AL64570314307082732341753074987
S/G/Y/R/B/O NT_004350AL64570314307082chr1NT_004350AC06819815821601243760345827834
S/G/Y/R/B/O NT_004350AL64570314307082chr1NT_004350AL59082216064021464260046426
S/G/Y/R/B/O NT_004350AC06819815821601chr1NT_004350AL59082216064021106612010059116671
S/G/Y/R/B/O NT_004350AC06819815821601chr1NT_004350AC02562416757671322401576033816
S/G/Y/R/B/O NT_004350AC06819815821601chr1NT_004350AC02580216761901318952604313637635
S/G/Y/R/B/O NT_004350AC06819815821601chr1NT_004350AC09293416552431282540259730851
S/G/Y/R/B/O NT_004350AL59082216064021chr1NT_004350AC09293416552431561290758363712
S/G/Y/R/B/O NT_004350AL59082216064021chr1NT_004350AC02562416757671550033233151559751
S/G/Y/R/B/O NT_004350AL59082216064021chr1NT_004350AC025802167619013936826061850660480
S/G/Y/R/B/O NT_004350AL59082216064021chr1NT_004350AL64570314307082464260046426
S/G/Y/R/B/O NT_004350AC09293416552431chr1NT_004350AC025624167576717447161081729597874
S/G/Y/R/B/O NT_004350AC09293416552431chr1NT_004350AC0258021676190195505481719817120139
S/G/Y/R/B/O NT_004350AC09293416552431chr1NT_004350AC06819815821601282540259730851
S/G/Y/R/B/O NT_004350AC09293416552431chr1NT_004350AL51347718033553211450021145
S/G/Y/R/B/O NT_004350AC09293416552431chr1NT_004350AL58973917798373181010210520206
S/G/Y/R/B/O NT_004350AC02562416757671chr1NT_004350AC025802167619014834011257252662123
S/G/Y/R/B/O NT_004350AC02562416757671chr1NT_004350AC06819815821601322401576033816
S/G/Y/R/B/O NT_004350AC02562416757671chr1NT_004350AL51347718033553461238268054391
S/G/Y/R/B/O NT_004350AC02562416757671chr1NT_004350AL58973917798373220200022020
S/G/Y/R/B/O NT_004350AC02562416757671chr1NT_004350AL59082216064021550033233151559751
S/G/Y/R/B/O NT_004350AC02580216761901chr1NT_004350AL58973917798373144140203116445
S/G/Y/R/B/O NT_004350AC02580216761901chr1NT_004350AC06819815821601318952604313637635
S/G/Y/R/B/O NT_004350AC02580216761901chr1NT_004350AC0929341655243195505481719817120139
S/G/Y/R/B/O NT_004350AC02580216761901chr1NT_004350AL51347718033553479760892756903
S/G/Y/R/B/O NT_004350AC02580216761901chr1NT_004350AL590822160640213936826061850660480
S/G/Y/R/B/O NT_004350AL58973917798373chr1NT_004350AL513477180335530000
S/G/Y/R/B/O NT_004350AL58973917798373chr1NT_004350AC02562416757671220200022020
S/G/Y/R/B/O NT_004350AL58973917798373chr1NT_004350AC09293416552431181010210520206
S/G/Y/R/B/O NT_004350AL51347718033553chr1NT_004350AL513531190768532000002000
S/G/Y/R/B/O NT_004350AL51347718033553chr1NT_004350AC02562416757671461238268054391
S/G/Y/R/B/O NT_004350AL51347718033553chr1NT_004350AC02580216761901479760892756903
S/G/Y/R/B/O NT_004350AL51347718033553chr1NT_004350AC09293416552431211450021145
S/G/Y/R/B/O NT_004350AL51353119076853chr1NT_004350AL139246190968132000002000
S/G/Y/R/B/O NT_004350AL13924619096813chr1NT_004350AL589746206241730019841984
S/G/Y/R/B/O NT_004350AL58974620624173