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  Chromosome 1 - Clone Overlaps - Single Contig
 
Description of this page Main Reports Page Main Assembly Page Main Overlap Page Whole Chromosome Single Contigs

Line color code:

  • White: overlap with immediately succeeding clone
  • Green: overlap with clone in same contig
  • Pink: overlap with clone in same chromosome, different contig
  • Red: overlap with clone on different chromosome
  • Yellow: overlap with clone not used in assembly
NT_032954 NT_004350 NT_022058 NT_004321 NT_004547 NT_021917 NT_028054 NT_032970
NT_032967 NT_021937 NT_004488 NT_022041 NT_004873 NT_030584 NT_004572 NT_029218
NT_004610 NT_032979 NT_004391 NT_030571 NT_004782 NT_028053 NT_004538 NT_004511
NT_004852 NT_032963 NT_032971 NT_032972 NT_031724 NT_004386 NT_032978 NT_032977
NT_004424 NT_032976 NT_032965 NT_032973 NT_031689 NT_029223 NT_004641 NT_029865
NT_031737 NT_004636 NT_032948 NT_004464 NT_032953 NT_004483 NT_004302 NT_032960
NT_032956 NT_032974 NT_004902 NT_026943 NT_029231 NT_004658 NT_004686 NT_021979
NT_030565 NT_028050 NT_004308 NT_004623 NT_030567 NT_032957 NT_021977 NT_029860
NT_019273 NT_031697 NT_004754 NT_032961 NT_032975 NT_022052 NT_022071 NT_004434
NT_032962 NT_021907 NT_004441 NT_030577 NT_004858 NT_019291 NT_031708 NT_029226
NT_026945 NT_004982 NT_032952 NT_004668 NT_029874 NT_004487 NT_032958 NT_004599
NT_031716 NT_004671 NT_021909 NT_004416 NT_029862 NT_021905 NT_032947 NT_021877
NT_004612 NT_031718 NT_032950 NT_004525 NT_032955 NT_029863 NT_032951 NT_021953
NT_004861 NT_031696 NT_004908 NT_004559 NT_031728 NT_021973 NT_004753 NT_004433
NT_030561 NT_004836 NT_031685 NT_004771 NT_004734 NT_031700 NT_031719 NT_004536
NT_032964 NT_031732 NT_032966 NT_031730 NT_029870 NT_032969 NT_032968


  NT_029226
 
LinksContig1Acc1Start1PhsChr2Contig2Acc2Start2PhsStrong OverlapMedium OverlapWeak OverlapTotal Overlap
S/G/Y/R/B/O NT_029226AC0732231511612341chr1NT_029226AL0222401511995723003169831698
S/G/Y/R/B/O NT_029226AC0732231511612341chr1NT_004434AL04971514127357733015302326453417
S/G/Y/R/B/O NT_029226AC0732231511612341chr1NT_032975AL5125031215128393165100813324643
S/G/Y/R/B/O NT_029226AC0732231511612341chr1NT_004434AL59230714141820413013420293070962872
S/G/Y/R/B/O NT_029226AC0732231511612341  AC0183811500250941107950593916734
S/G/Y/R/B/O NT_029226AC0732231511612341  AC02411912173063411935138091314036300
S/G/Y/R/B/O NT_029226AL0222401511995723chr1NT_029226AL45105815129519130000
S/G/Y/R/B/O NT_029226AL4510581512951913chr1NT_029226AL35881315130586130000
S/G/Y/R/B/O NT_029226AL4510581512951913chr1NT_004434AL5922841407430063105420010542
S/G/Y/R/B/O NT_029226AL3588131513058613chr1NT_029226AL10984415142014330087838783
S/G/Y/R/B/O NT_029226AL3588131513058613chr1NT_004434AL5922841407430063588180058818
S/G/Y/R/B/O NT_029226AL3588131513058613  AC018593152630076110328448001179109263
S/G/Y/R/B/O NT_029226AL1098441514201433chr1NT_029226AL07846315148058332000002000
S/G/Y/R/B/O NT_029226AL1098441514201433  AL1099481514805831129660012966
S/G/Y/R/B/O NT_029226AL0784631514805833chr1NT_029226AC01878515162512710000
S/G/Y/R/B/O NT_029226AL0784631514805833chr1NT_029226AL3581751519371451529010052901
S/G/Y/R/B/O NT_029226AL0784631514805833  AL3574931540846221907242419237995522
S/G/Y/R/B/O NT_029226AC0187851516251271chr1NT_029226AL5914931516312701533194265057584
S/G/Y/R/B/O NT_029226AC0187851516251271chr1NT_029226AL5904871516737983599792044604368066
S/G/Y/R/B/O NT_029226AC0187851516251271  AL3583531517673841334652044604341552
S/G/Y/R/B/O NT_029226AL5914931516312701chr1NT_029226AL59048715167379830000
S/G/Y/R/B/O NT_029226AL5914931516312701  AC01859315163127011525225762347141299
S/G/Y/R/B/O NT_029226AL5914931516312701  AL10994815162512711657525664763266773
S/G/Y/R/B/O NT_029226AL5904871516737983chr1NT_029226AL3580731517673843183880018388
S/G/Y/R/B/O NT_029226AL5904871516737983chr1NT_029226AC0187851516251271599792044604368066
S/G/Y/R/B/O NT_029226AL5904871516737983  AC0222431516251271137901568015358
S/G/Y/R/B/O NT_029226AL3580731517673843chr1NT_029226AL35817515193714510000
S/G/Y/R/B/O NT_029226AL3580731517673843  AC022243151625127113068395707027147280
S/G/Y/R/B/O NT_029226AL3580731517673843  AL358353142992777127123083494110617
S/G/Y/R/B/O NT_029226AL3581751519371451chr1NT_029226AL59249215204458930000
S/G/Y/R/B/O NT_029226AL3581751519371451chr1NT_029226AC01341115230314915380001020064000
S/G/Y/R/B/O NT_029226AL3581751519371451chr1NT_029226AL0784631514805833529010052901
S/G/Y/R/B/O NT_029226AL3581751519371451chr1NT_029226AL5924941524640682576030057603
S/G/Y/R/B/O NT_029226AL5924921520445893chr1NT_029226AL51352615220267830000
S/G/Y/R/B/O NT_029226AL5924921520445893  AC02450012883521416563561421161583392
S/G/Y/R/B/O NT_029226AL5924921520445893  AC0274871404268361798742794136484032
S/G/Y/R/B/O NT_029226AL5924921520445893  AC0914371404785071145420014542
S/G/Y/R/B/O NT_029226AL5135261522026783chr1NT_029226AL66310215225827430000
S/G/Y/R/B/O NT_029226AL5135261522026783chr1NT_029226AC0056291522649003574230057423
S/G/Y/R/B/O NT_029226AL5135261522026783  AC0274872461325931402201526676848514
S/G/Y/R/B/O NT_029226AL6631021522582743chr1NT_029226AC00562915226490038611008611
S/G/Y/R/B/O NT_029226AC0056291522649003chr1NT_029226AC01341115230314913484003484
S/G/Y/R/B/O NT_029226AC0056291522649003chr2NT_032981AC0100982464859691274540991437368
S/G/Y/R/B/O NT_029226AC0056291522649003chr1NT_029226AL5135261522026783574230057423
S/G/Y/R/B/O NT_029226AC0056291522649003  AC0274872462908741526850298655671
S/G/Y/R/B/O NT_029226AC0134111523031491chr1NT_029226AC1035391523145451234927056758138129
S/G/Y/R/B/O NT_029226AC0134111523031491chr2NT_032981AC01009824648596914836442721135463990
S/G/Y/R/B/O NT_029226AC0134111523031491chr1NT_021877AL16173619953181132591701366539582
S/G/Y/R/B/O NT_029226AC0134111523031491chr1NT_029226AL35817515193714515380001020064000
S/G/Y/R/B/O NT_029226AC1035391523145451chr1NT_029226AC0245731523216731001636616366
S/G/Y/R/B/O NT_029226AC1035391523145451chr2NT_032981AC0100982464859691449836255901060248
S/G/Y/R/B/O NT_029226AC0245731523216731chr1NT_029226AL59249415246406820000
S/G/Y/R/B/O NT_029226AC0245731523216731  AP0012141273415983411140041114
S/G/Y/R/B/O NT_029226AL5924941524640682chr1NT_029226AL69147115263007610000
S/G/Y/R/B/O NT_029226AL5924941524640682chr1NT_029226AC06900115294514415725527203831098285
S/G/Y/R/B/O NT_029226AL5924941524640682chr1NT_029226AL3581751519371451576030057603
S/G/Y/R/B/O NT_029226AL6914711526300761chr1NT_029226AL592207152686813210267800102678
S/G/Y/R/B/O NT_029226AL6914711526300761chr1NT_029226AC02446815282329813079802064951447
S/G/Y/R/B/O NT_029226AL6914711526300761  AL3558661511995721580604690062750
S/G/Y/R/B/O NT_029226AL6914711526300761  AL683889152686813117825300178253
S/G/Y/R/B/O NT_029226AL5922071526868132chr1NT_029226AC024468152823298111785201331119183
S/G/Y/R/B/O NT_029226AL5922071526868132  AL3558661528232981900444690094734
S/G/Y/R/B/O NT_029226AL5922071526868132  AL68388915282329816862202305791679
S/G/Y/R/B/O NT_029226AC0244681528232981chr1NT_029226AC06900115294514410000
S/G/Y/R/B/O NT_029226AC0244681528232981chr1NT_029226AL69147115263007613079802064951447
S/G/Y/R/B/O NT_029226AC0244681528232981  AL3558661526300761427870133044117
S/G/Y/R/B/O NT_029226AC0244681528232981  AL6838891526868131484770048477
S/G/Y/R/B/O NT_029226AC0690011529451441         
S/G/Y/R/B/O NT_029226AC0690011529451441chr1NT_029226AL59249415246406825725527203831098285