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  Chromosome 1 - Clone Overlaps - Single Contig
 
Description of this page Main Reports Page Main Assembly Page Main Overlap Page Whole Chromosome Single Contigs

Line color code:

  • White: overlap with immediately succeeding clone
  • Green: overlap with clone in same contig
  • Pink: overlap with clone in same chromosome, different contig
  • Red: overlap with clone on different chromosome
  • Yellow: overlap with clone not used in assembly
NT_032954 NT_004350 NT_022058 NT_004321 NT_004547 NT_021917 NT_028054 NT_032970
NT_032967 NT_021937 NT_004488 NT_022041 NT_004873 NT_030584 NT_004572 NT_029218
NT_004610 NT_032979 NT_004391 NT_030571 NT_004782 NT_028053 NT_004538 NT_004511
NT_004852 NT_032963 NT_032971 NT_032972 NT_031724 NT_004386 NT_032978 NT_032977
NT_004424 NT_032976 NT_032965 NT_032973 NT_031689 NT_029223 NT_004641 NT_029865
NT_031737 NT_004636 NT_032948 NT_004464 NT_032953 NT_004483 NT_004302 NT_032960
NT_032956 NT_032974 NT_004902 NT_026943 NT_029231 NT_004658 NT_004686 NT_021979
NT_030565 NT_028050 NT_004308 NT_004623 NT_030567 NT_032957 NT_021977 NT_029860
NT_019273 NT_031697 NT_004754 NT_032961 NT_032975 NT_022052 NT_022071 NT_004434
NT_032962 NT_021907 NT_004441 NT_030577 NT_004858 NT_019291 NT_031708 NT_029226
NT_026945 NT_004982 NT_032952 NT_004668 NT_029874 NT_004487 NT_032958 NT_004599
NT_031716 NT_004671 NT_021909 NT_004416 NT_029862 NT_021905 NT_032947 NT_021877
NT_004612 NT_031718 NT_032950 NT_004525 NT_032955 NT_029863 NT_032951 NT_021953
NT_004861 NT_031696 NT_004908 NT_004559 NT_031728 NT_021973 NT_004753 NT_004433
NT_030561 NT_004836 NT_031685 NT_004771 NT_004734 NT_031700 NT_031719 NT_004536
NT_032964 NT_031732 NT_032966 NT_031730 NT_029870 NT_032969 NT_032968


  NT_029865
 
LinksContig1Acc1Start1PhsChr2Contig2Acc2Start2PhsStrong OverlapMedium OverlapWeak OverlapTotal Overlap
S/G/Y/R/B/O NT_029865AC026025608703671chr1NT_029865AL4454326099301534062004062
S/G/Y/R/B/O NT_029865AC026025608703671chr1NT_004641AC096534606716471107555011616119171
S/G/Y/R/B/O NT_029865AC026025608703671  AL3900546067164713535711192643852987
S/G/Y/R/B/O NT_029865AL445432609930153chr1NT_029865AC0969476099567630000
S/G/Y/R/B/O NT_029865AC096947609956763chr1NT_029865AC092784610953343488870048887
S/G/Y/R/B/O NT_029865AC096947609956763  AL35611261095334111413400114134
S/G/Y/R/B/O NT_029865AC092784610953343chr1NT_029865AL445198612129473595370059537
S/G/Y/R/B/O NT_029865AC092784610953343  AL356112609956761607570060757
S/G/Y/R/B/O NT_029865AL445198612129473chr1NT_029865AL0968886123174530000
S/G/Y/R/B/O NT_029865AL445198612129473  AL356112610953341137600013760
S/G/Y/R/B/O NT_029865AL096888612317453chr1NT_029865AL5903936135503630199601996
S/G/Y/R/B/O NT_029865AL590393613550363chr1NT_029865AC0997916139390230198601986
S/G/Y/R/B/O NT_029865AC099791613939023chr1NT_029865AC0970646163161114153224411012754100
S/G/Y/R/B/O NT_029865AC099791613939023chr1NT_029865AC025691616383201102646268928443133778
S/G/Y/R/B/O NT_029865AC097064616316111chr1NT_029865AC025691616383201279622685804138688
S/G/Y/R/B/O NT_029865AC097064616316111chr1NT_029865AL449143616971503584630058463
S/G/Y/R/B/O NT_029865AC097064616316111  AL357145613939021843982452368190531
S/G/Y/R/B/O NT_029865AC025691616383201chr1NT_029865AL4491436169715030000
S/G/Y/R/B/O NT_029865AC025691616383201chr1NT_029865AC099791613939023102646268928443133778
S/G/Y/R/B/O NT_029865AL449143616971503chr1NT_029865AL3538026178232330000
S/G/Y/R/B/O NT_029865AL449143616971503chr1NT_029865AC097064616316111584630058463
S/G/Y/R/B/O NT_029865AL449143616971503  AL357145616316111360520368139733
S/G/Y/R/B/O NT_029865AL353802617823233chr1NT_029865AL5903746192544932000002000
S/G/Y/R/B/O NT_029865AL590374619254493chr1NT_029865AL1364586193322430199901999
S/G/Y/R/B/O NT_029865AL136458619332243chr1NT_029865AL1627396205995030000
S/G/Y/R/B/O NT_029865AL136458619332243  AC0447796178232311298046171387331470
S/G/Y/R/B/O NT_029865AL136458619332243  AC09017061782323296074033081129155
S/G/Y/R/B/O NT_029865AL162739620599503chr1NT_029865AL1393436214194632000002000
S/G/Y/R/B/O NT_029865AL139343621419463chr1NT_029865AC096946622847641703690070369
S/G/Y/R/B/O NT_029865AL139343621419463  AC044779621419461202180834528563
S/G/Y/R/B/O NT_029865AC096946622847641chr1NT_029865AL4510446234379630199201992
S/G/Y/R/B/O NT_029865AC096946622847641  AL391257621419461110364915015951
S/G/Y/R/B/O NT_029865AL451044623437963chr1NT_029865AL1388476247116630199501995
S/G/Y/R/B/O NT_029865AL451044623437963  AL391257624711661518336547058380
S/G/Y/R/B/O NT_029865AL138847624711663chr1NT_029865AC1039236253584030199801998
S/G/Y/R/B/O NT_029865AC103923625358403chr1NT_029865AL391842627194631337170869542412
S/G/Y/R/B/O NT_029865AL391842627194631chr1NT_029865AC099794627416123908632101092964
S/G/Y/R/B/O NT_029865AC099794627416123chr1NT_029865AL1624006287595332000002000
S/G/Y/R/B/O NT_029865AL162400628759533chr1NT_029865AC0965436299179332000002000
S/G/Y/R/B/O NT_029865AL162400628759533  AC026144627194631706562909073565
S/G/Y/R/B/O NT_029865AC096543629917933chr1NT_029865AL1389356315263030199601996
S/G/Y/R/B/O NT_029865AC096543629917933  AC026144627416121683464139222174706
S/G/Y/R/B/O NT_029865AL138935631526303chr1NT_029865AL0496366316209232000002000
S/G/Y/R/B/O NT_029865AL049636631620923chr1NT_029865AL5922186330282032000002000
S/G/Y/R/B/O NT_029865AL592218633028203chr1NT_029865AL591362633402031218650021865
S/G/Y/R/B/O NT_029865AL591362633402031chr1NT_029865AL109925634108083694920069492
S/G/Y/R/B/O NT_029865AL591362633402031  AC027520633402031153753916116820459
S/G/Y/R/B/O NT_029865AL109925634108083chr1NT_029865AL5126636356339130000
S/G/Y/R/B/O NT_029865AL109925634108083  AC027520633028201904001702379595897
S/G/Y/R/B/O NT_029865AL512663635633913chr1NT_029865AL1617426363656230199501995
S/G/Y/R/B/O NT_029865AL512663635633913  AC027520633402031632716462069733
S/G/Y/R/B/O NT_029865AL161742636365623chr1NT_029865AL3537136374895530000
S/G/Y/R/B/O NT_029865AL161742636365623  AC02554463636562110204145951088107724
S/G/Y/R/B/O NT_029865AL161742636365623  AL356914636365621897514943372098414
S/G/Y/R/B/O NT_029865AL353713637489553chr1NT_029865AL359769638315091460390046039
S/G/Y/R/B/O NT_029865AL353713637489553  AC025544635633911672140067214
S/G/Y/R/B/O NT_029865AL353713637489553  AL356914635633911222870022287
S/G/Y/R/B/O NT_029865AL359769638315091chr1NT_029865AC018773638413651615002972064472
S/G/Y/R/B/O NT_029865AL359769638315091  AC025544638413651190630019063
S/G/Y/R/B/O NT_029865AL359769638315091  AL137859638413653970600097060
S/G/Y/R/B/O NT_029865AC018773638413651chr1NT_029865AL1387936397458530000
S/G/Y/R/B/O NT_029865AC018773638413651  AL137859775993063485992971051570
S/G/Y/R/B/O NT_029865AL138793639745853chr1NT_029865AL4452056398722630198901989
S/G/Y/R/B/O NT_029865AL445205639872263chr1NT_029865AL1619166410116430000
S/G/Y/R/B/O NT_029865AL161916641011643chr1NT_029865AL5921846420031330199301993
S/G/Y/R/B/O NT_029865AL161916641011643  AC060822639745851518174437056254
S/G/Y/R/B/O NT_029865AL592184642003133chr1NT_029865AL5130446422056432000002000
S/G/Y/R/B/O NT_029865AL592184642003133  AC060822642003131188012546021347
S/G/Y/R/B/O NT_029865AL513044642205643chr1NT_029865AL3555156433046530199701997
S/G/Y/R/B/O NT_029865AL513044642205643  AC060822642205641913892111148194981
S/G/Y/R/B/O NT_029865AL513044642205643  AC061976642205641712140071214
S/G/Y/R/B/O NT_029865AL355515643304653chr1NT_029865AL5904056443367430199701997
S/G/Y/R/B/O NT_029865AL355515643304653  AC012245642003131401771711041888
S/G/Y/R/B/O NT_029865AL355515643304653  AC0619766420031318679063438365101498
S/G/Y/R/B/O NT_029865AL590405644336743chr1NT_029865AC0996786456546530000
S/G/Y/R/B/O NT_029865AL590405644336743  AC01224564433674110271123860105097
S/G/Y/R/B/O NT_029865AC099678645654653chr1NT_029865AC093427647069553534970053497
S/G/Y/R/B/O NT_029865AC099678645654653chr1NT_029865AL357078648807021113810011381
S/G/Y/R/B/O NT_029865AC099678645654653  AL354878647069551157400015740
S/G/Y/R/B/O NT_029865AC093427647069553chr1NT_029865AL5904366478533530000
S/G/Y/R/B/O NT_029865AC093427647069553chr1NT_029865AL357078648807021113810011381
S/G/Y/R/B/O NT_029865AC093427647069553  AL354878645654651939510093951
S/G/Y/R/B/O NT_029865AL590436647853353chr1NT_029865AL6065176480655230000
S/G/Y/R/B/O NT_029865AL590436647853353chr1NT_029865AC025866648790821158800015880
S/G/Y/R/B/O NT_029865AL590436647853353  AL354878648790821181970507123268
S/G/Y/R/B/O NT_029865AL606517648065523chr1NT_029865AC025866648790821668152444069259
S/G/Y/R/B/O NT_029865AL606517648065523  AL3548786487908211607702082036897
S/G/Y/R/B/O NT_029865AC025866648790821chr1NT_029865AL357078648807021637722572719173535
S/G/Y/R/B/O NT_029865AC025866648790821chr1NT_029865AL590436647853353158800015880
S/G/Y/R/B/O NT_029865AC025866648790821  AL354878648807021449970044997
S/G/Y/R/B/O NT_029865AL357078648807021chr1NT_029865AC0996806502260434325004325
S/G/Y/R/B/O NT_029865AL357078648807021chr1NT_029865AC093427647069553113810011381
S/G/Y/R/B/O NT_029865AL357078648807021chr1NT_029865AC099678645654653113810011381
S/G/Y/R/B/O NT_029865AC099680650226043chr1NT_029865AL3562126511166032000002000
S/G/Y/R/B/O NT_029865AL356212651116603chr1NT_029865AL1392946514106330199201992
S/G/Y/R/B/O NT_029865AL139294651410633